RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
NXF3-205ENST00000470724 A8MUN3 132 aa4.68□□□□□ -1.66
NXF3-205ENST00000470724 ATOX1O00244 68 aa4.68□□□□□ -1.66
NXF3-205ENST00000470724 MT-ATP8P03928 68 aa4.68□□□□□ -1.66
NXF3-205ENST00000470724 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
NXF3-205ENST00000470724 CYP4F30PQ9H0H9 118 aa4.68□□□□□ -1.66
NXF3-205ENST00000470724 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
NXF3-205ENST00000470724 MT2AP02795 61 aa4.65□□□□□ -1.67
NXF3-205ENST00000470724 LINC00208Q96KT6 92 aa4.65□□□□□ -1.67
NXF3-205ENST00000470724 S4R3F8 94 aa4.65□□□□□ -1.67
NXF3-205ENST00000470724 LCA10Q71F78 164 aa4.63□□□□□ -1.67
NXF3-205ENST00000470724 MT1FP04733 61 aa4.62□□□□□ -1.67
NXF3-205ENST00000470724 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
NXF3-205ENST00000470724 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
NXF3-205ENST00000470724 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
NXF3-205ENST00000470724 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
NXF3-205ENST00000470724 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
NXF3-205ENST00000470724 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
NXF3-205ENST00000470724 KLKP1Q107X0 134 aa4.56□□□□□ -1.68
NXF3-205ENST00000470724 H3BPC8 53 aa4.54□□□□□ -1.68
NXF3-205ENST00000470724 USH2AO75445 5202 aa4.52□□□□□ -1.69
NXF3-205ENST00000470724 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
NXF3-205ENST00000470724 NDUFC1O43677 76 aa4.51□□□□□ -1.69
NXF3-205ENST00000470724 COX7CP15954 63 aa4.51□□□□□ -1.69
NXF3-205ENST00000470724 KRTAP9-3Q9BYQ3 159 aa4.51□□□□□ -1.69
NXF3-205ENST00000470724 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
NXF3-205ENST00000470724 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
NXF3-205ENST00000470724 LCE2BO14633 110 aa4.47□□□□□ -1.69
NXF3-205ENST00000470724 SERP2Q8N6R1 65 aa4.46□□□□□ -1.7
NXF3-205ENST00000470724 SNURFQ9Y675 71 aa4.45□□□□□ -1.7
NXF3-205ENST00000470724 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
NXF3-205ENST00000470724 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
NXF3-205ENST00000470724 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
NXF3-205ENST00000470724 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
NXF3-205ENST00000470724 CHKB-CPT1BH3BT56 60 aa4.39□□□□□ -1.71
NXF3-205ENST00000470724 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
NXF3-205ENST00000470724 ACYP2P14621 99 aa4.38□□□□□ -1.71
NXF3-205ENST00000470724 KRTAP19-1Q8IUB9 90 aa4.38□□□□□ -1.71
NXF3-205ENST00000470724 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
NXF3-205ENST00000470724 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
NXF3-205ENST00000470724 A6NN06 94 aa4.35□□□□□ -1.71
NXF3-205ENST00000470724 Q5VV11 94 aa4.34□□□□□ -1.71
NXF3-205ENST00000470724 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
NXF3-205ENST00000470724 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
NXF3-205ENST00000470724 H0YAA0 97 aa4.33□□□□□ -1.72
NXF3-205ENST00000470724 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
NXF3-205ENST00000470724 SPANXA2-OT1Q8N9U9 137 aa4.3□□□□□ -1.72
NXF3-205ENST00000470724 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
NXF3-205ENST00000470724 CYSTM1Q9H1C7 97 aa4.29□□□□□ -1.72
NXF3-205ENST00000470724 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
NXF3-205ENST00000470724 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
NXF3-205ENST00000470724 R4GN34 69 aa4.28□□□□□ -1.72
NXF3-205ENST00000470724 H7BZZ5 65 aa4.26□□□□□ -1.73
NXF3-205ENST00000470724 M0QZ58 72 aa4.26□□□□□ -1.73
NXF3-205ENST00000470724 P0C880 135 aa4.26□□□□□ -1.73
NXF3-205ENST00000470724 MT1BP07438 61 aa4.25□□□□□ -1.73
NXF3-205ENST00000470724 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
NXF3-205ENST00000470724 A6NED7 52 aa4.23□□□□□ -1.73
NXF3-205ENST00000470724 K7ERS5 55 aa4.23□□□□□ -1.73
NXF3-205ENST00000470724 Q1T7F1 81 aa4.23□□□□□ -1.73
NXF3-205ENST00000470724 COA5Q86WW8 74 aa4.23□□□□□ -1.73
NXF3-205ENST00000470724 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
NXF3-205ENST00000470724 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
NXF3-205ENST00000470724 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
NXF3-205ENST00000470724 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
NXF3-205ENST00000470724 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
NXF3-205ENST00000470724 ROMO1P60602 79 aa4.12□□□□□ -1.75
NXF3-205ENST00000470724 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
NXF3-205ENST00000470724 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
NXF3-205ENST00000470724 A0A0D9SG42 100 aa4.03□□□□□ -1.76
NXF3-205ENST00000470724 A0A1B0GU69 56 aa4.03□□□□□ -1.76
NXF3-205ENST00000470724 A0A1B0GU33 70 aa4.02□□□□□ -1.77
NXF3-205ENST00000470724 MT1XP80297 61 aa4.02□□□□□ -1.77
NXF3-205ENST00000470724 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
NXF3-205ENST00000470724 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
NXF3-205ENST00000470724 A8MU10 97 aa4□□□□□ -1.77
NXF3-205ENST00000470724 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
NXF3-205ENST00000470724 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
NXF3-205ENST00000470724 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
NXF3-205ENST00000470724 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
NXF3-205ENST00000470724 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
NXF3-205ENST00000470724 KMT2DO14686 5537 aa3.91□□□□□ -1.78
NXF3-205ENST00000470724 NEBP20929 6669 aa3.9□□□□□ -1.79
NXF3-205ENST00000470724 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
NXF3-205ENST00000470724 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
NXF3-205ENST00000470724 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
NXF3-205ENST00000470724 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
NXF3-205ENST00000470724 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
NXF3-205ENST00000470724 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
NXF3-205ENST00000470724 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
NXF3-205ENST00000470724 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
NXF3-205ENST00000470724 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
NXF3-205ENST00000470724 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
NXF3-205ENST00000470724 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
NXF3-205ENST00000470724 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
NXF3-205ENST00000470724 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
NXF3-205ENST00000470724 UQCR11O14957 56 aa3.8□□□□□ -1.8
NXF3-205ENST00000470724 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
NXF3-205ENST00000470724 SPRR2EP22531 72 aa3.77□□□□□ -1.81
NXF3-205ENST00000470724 SPRR2BP35325 72 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms