RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 A6NED7 52 aa8.57□□□□□ -1.04
C19orf54-202ENST00000469741 LCA10Q71F78 164 aa8.5□□□□□ -1.05
C19orf54-202ENST00000469741 KTN1-AS1Q86SY8 53 aa8.45□□□□□ -1.06
C19orf54-202ENST00000469741 MUC17Q685J3 4493 aa8.44□□□□□ -1.06
C19orf54-202ENST00000469741 A8MU10 97 aa8.42□□□□□ -1.06
C19orf54-202ENST00000469741 A6NN06 94 aa8.41□□□□□ -1.06
C19orf54-202ENST00000469741 SEC61GP60059 68 aa8.4□□□□□ -1.06
C19orf54-202ENST00000469741 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
C19orf54-202ENST00000469741 SPINK7P58062 85 aa8.4□□□□□ -1.07
C19orf54-202ENST00000469741 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.07
C19orf54-202ENST00000469741 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
C19orf54-202ENST00000469741 XP32Q5T750 250 aa8.33□□□□□ -1.08
C19orf54-202ENST00000469741 A0A1B0GU69 56 aa8.3□□□□□ -1.08
C19orf54-202ENST00000469741 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
C19orf54-202ENST00000469741 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
C19orf54-202ENST00000469741 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
C19orf54-202ENST00000469741 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
C19orf54-202ENST00000469741 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
C19orf54-202ENST00000469741 UQCR11O14957 56 aa8.22□□□□□ -1.09
C19orf54-202ENST00000469741 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.1
C19orf54-202ENST00000469741 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.11
C19orf54-202ENST00000469741 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
C19orf54-202ENST00000469741 KRTAP19-2Q3LHN2 52 aa8.01□□□□□ -1.13
C19orf54-202ENST00000469741 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
C19orf54-202ENST00000469741 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
C19orf54-202ENST00000469741 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
C19orf54-202ENST00000469741 S4R3F8 94 aa7.96□□□□□ -1.14
C19orf54-202ENST00000469741 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
C19orf54-202ENST00000469741 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
C19orf54-202ENST00000469741 A0A1B0GU33 70 aa7.91□□□□□ -1.14
C19orf54-202ENST00000469741 H0YAA0 97 aa7.84□□□□□ -1.15
C19orf54-202ENST00000469741 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
C19orf54-202ENST00000469741 MT1HP80294 61 aa7.81□□□□□ -1.16
C19orf54-202ENST00000469741 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
C19orf54-202ENST00000469741 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
C19orf54-202ENST00000469741 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
C19orf54-202ENST00000469741 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
C19orf54-202ENST00000469741 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
C19orf54-202ENST00000469741 K7ERS5 55 aa7.72□□□□□ -1.17
C19orf54-202ENST00000469741 P0C880 135 aa7.66□□□□□ -1.18
C19orf54-202ENST00000469741 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
C19orf54-202ENST00000469741 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
C19orf54-202ENST00000469741 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.2
C19orf54-202ENST00000469741 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.2
C19orf54-202ENST00000469741 M0R2T5 61 aa7.57□□□□□ -1.2
C19orf54-202ENST00000469741 M0QZ58 72 aa7.52□□□□□ -1.21
C19orf54-202ENST00000469741 FSIP2Q5CZC0 6907 aa7.51□□□□□ -1.21
C19orf54-202ENST00000469741 A0A0D9SG42 100 aa7.48□□□□□ -1.21
C19orf54-202ENST00000469741 ROMO1P60602 79 aa7.47□□□□□ -1.21
C19orf54-202ENST00000469741 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
C19orf54-202ENST00000469741 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
C19orf54-202ENST00000469741 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
C19orf54-202ENST00000469741 MT2AP02795 61 aa7.35□□□□□ -1.23
C19orf54-202ENST00000469741 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
C19orf54-202ENST00000469741 R4GN34 69 aa7.35□□□□□ -1.23
C19orf54-202ENST00000469741 MT1FP04733 61 aa7.32□□□□□ -1.24
C19orf54-202ENST00000469741 SPINT4Q6UDR6 99 aa7.29□□□□□ -1.24
C19orf54-202ENST00000469741 USH2AO75445 5202 aa7.27□□□□□ -1.25
C19orf54-202ENST00000469741 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
C19orf54-202ENST00000469741 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
C19orf54-202ENST00000469741 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
C19orf54-202ENST00000469741 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
C19orf54-202ENST00000469741 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
C19orf54-202ENST00000469741 LCE2BO14633 110 aa7.17□□□□□ -1.26
C19orf54-202ENST00000469741 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
C19orf54-202ENST00000469741 H3BS24 57 aa7.04□□□□□ -1.28
C19orf54-202ENST00000469741 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
C19orf54-202ENST00000469741 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
C19orf54-202ENST00000469741 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
C19orf54-202ENST00000469741 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
C19orf54-202ENST00000469741 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
C19orf54-202ENST00000469741 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.3
C19orf54-202ENST00000469741 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
C19orf54-202ENST00000469741 MT1BP07438 61 aa6.77□□□□□ -1.33
C19orf54-202ENST00000469741 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
C19orf54-202ENST00000469741 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
C19orf54-202ENST00000469741 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
C19orf54-202ENST00000469741 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
C19orf54-202ENST00000469741 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
C19orf54-202ENST00000469741 TNP1P09430 55 aa6.66□□□□□ -1.34
C19orf54-202ENST00000469741 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
C19orf54-202ENST00000469741 SYNE2Q8WXH0 6885 aaKnown RBP6.64□□□□□ -1.35
C19orf54-202ENST00000469741 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
C19orf54-202ENST00000469741 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
C19orf54-202ENST00000469741 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
C19orf54-202ENST00000469741 MT1XP80297 61 aa6.44□□□□□ -1.38
C19orf54-202ENST00000469741 KMT2DO14686 5537 aa6.43□□□□□ -1.38
C19orf54-202ENST00000469741 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
C19orf54-202ENST00000469741 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
C19orf54-202ENST00000469741 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
C19orf54-202ENST00000469741 MUC12Q9UKN1 5478 aa6.29□□□□□ -1.4
C19orf54-202ENST00000469741 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
C19orf54-202ENST00000469741 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
C19orf54-202ENST00000469741 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
C19orf54-202ENST00000469741 KRTAP10-12P60413 245 aa6.21□□□□□ -1.41
C19orf54-202ENST00000469741 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
C19orf54-202ENST00000469741 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.43
C19orf54-202ENST00000469741 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.43
C19orf54-202ENST00000469741 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
C19orf54-202ENST00000469741 A0A0A0MQY5 61 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms