RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
SSBP1-208ENST00000469123 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
SSBP1-208ENST00000469123 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
SSBP1-208ENST00000469123 K7EQZ3 153 aa4.47□□□□□ -1.69
SSBP1-208ENST00000469123 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
SSBP1-208ENST00000469123 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
SSBP1-208ENST00000469123 ZCCHC13Q8WW36 166 aaKnown RBP4.46□□□□□ -1.7
SSBP1-208ENST00000469123 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
SSBP1-208ENST00000469123 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
SSBP1-208ENST00000469123 CHKB-CPT1BH3BT56 60 aa4.45□□□□□ -1.7
SSBP1-208ENST00000469123 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
SSBP1-208ENST00000469123 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
SSBP1-208ENST00000469123 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
SSBP1-208ENST00000469123 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
SSBP1-208ENST00000469123 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
SSBP1-208ENST00000469123 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
SSBP1-208ENST00000469123 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
SSBP1-208ENST00000469123 H3BPC8 53 aa4.39□□□□□ -1.71
SSBP1-208ENST00000469123 WFDC13Q8IUB5 93 aa4.39□□□□□ -1.71
SSBP1-208ENST00000469123 Q8N9L7 120 aa4.39□□□□□ -1.71
SSBP1-208ENST00000469123 A6NED7 52 aa4.38□□□□□ -1.71
SSBP1-208ENST00000469123 SPINK7P58062 85 aa4.37□□□□□ -1.71
SSBP1-208ENST00000469123 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
SSBP1-208ENST00000469123 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
SSBP1-208ENST00000469123 HRES1P13985 223 aa4.36□□□□□ -1.71
SSBP1-208ENST00000469123 MT1HP80294 61 aa4.36□□□□□ -1.71
SSBP1-208ENST00000469123 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
SSBP1-208ENST00000469123 M0R2T5 61 aa4.34□□□□□ -1.71
SSBP1-208ENST00000469123 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
SSBP1-208ENST00000469123 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
SSBP1-208ENST00000469123 Q5W150 140 aa4.3□□□□□ -1.72
SSBP1-208ENST00000469123 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
SSBP1-208ENST00000469123 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
SSBP1-208ENST00000469123 A8MU10 97 aa4.29□□□□□ -1.72
SSBP1-208ENST00000469123 IGKV2-30P06310 120 aa4.29□□□□□ -1.72
SSBP1-208ENST00000469123 ROMO1P60602 79 aa4.28□□□□□ -1.72
SSBP1-208ENST00000469123 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
SSBP1-208ENST00000469123 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
SSBP1-208ENST00000469123 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
SSBP1-208ENST00000469123 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SSBP1-208ENST00000469123 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
SSBP1-208ENST00000469123 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
SSBP1-208ENST00000469123 KRTAP19-1Q8IUB9 90 aa4.19□□□□□ -1.74
SSBP1-208ENST00000469123 H0Y9P7 68 aa4.18□□□□□ -1.74
SSBP1-208ENST00000469123 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
SSBP1-208ENST00000469123 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
SSBP1-208ENST00000469123 COA5Q86WW8 74 aa4.15□□□□□ -1.75
SSBP1-208ENST00000469123 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
SSBP1-208ENST00000469123 K7ERS5 55 aa4.12□□□□□ -1.75
SSBP1-208ENST00000469123 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
SSBP1-208ENST00000469123 S4R3F8 94 aa4.12□□□□□ -1.75
SSBP1-208ENST00000469123 UQCR11O14957 56 aa4.11□□□□□ -1.75
SSBP1-208ENST00000469123 MT2AP02795 61 aa4.1□□□□□ -1.75
SSBP1-208ENST00000469123 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
SSBP1-208ENST00000469123 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
SSBP1-208ENST00000469123 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
SSBP1-208ENST00000469123 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
SSBP1-208ENST00000469123 DMAC1Q96GE9 116 aa4.09□□□□□ -1.75
SSBP1-208ENST00000469123 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
SSBP1-208ENST00000469123 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
SSBP1-208ENST00000469123 MT1FP04733 61 aa4.07□□□□□ -1.76
SSBP1-208ENST00000469123 P0C880 135 aa4.02□□□□□ -1.77
SSBP1-208ENST00000469123 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
SSBP1-208ENST00000469123 CAMK2N1Q7Z7J9 78 aa4.01□□□□□ -1.77
SSBP1-208ENST00000469123 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
SSBP1-208ENST00000469123 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SSBP1-208ENST00000469123 H0YAA0 97 aa3.97□□□□□ -1.77
SSBP1-208ENST00000469123 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
SSBP1-208ENST00000469123 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
SSBP1-208ENST00000469123 ACYP2P14621 99 aa3.95□□□□□ -1.78
SSBP1-208ENST00000469123 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
SSBP1-208ENST00000469123 A0A1B0GU69 56 aa3.93□□□□□ -1.78
SSBP1-208ENST00000469123 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
SSBP1-208ENST00000469123 USH2AO75445 5202 aa3.89□□□□□ -1.79
SSBP1-208ENST00000469123 SPRR2GQ9BYE4 73 aa3.89□□□□□ -1.79
SSBP1-208ENST00000469123 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
SSBP1-208ENST00000469123 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
SSBP1-208ENST00000469123 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
SSBP1-208ENST00000469123 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
SSBP1-208ENST00000469123 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
SSBP1-208ENST00000469123 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SSBP1-208ENST00000469123 R4GN34 69 aa3.8□□□□□ -1.8
SSBP1-208ENST00000469123 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
SSBP1-208ENST00000469123 MT1BP07438 61 aa3.76□□□□□ -1.81
SSBP1-208ENST00000469123 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
SSBP1-208ENST00000469123 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
SSBP1-208ENST00000469123 M0QZ58 72 aa3.74□□□□□ -1.81
SSBP1-208ENST00000469123 A0A1B0GU33 70 aa3.73□□□□□ -1.81
SSBP1-208ENST00000469123 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
SSBP1-208ENST00000469123 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
SSBP1-208ENST00000469123 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
SSBP1-208ENST00000469123 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
SSBP1-208ENST00000469123 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
SSBP1-208ENST00000469123 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
SSBP1-208ENST00000469123 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
SSBP1-208ENST00000469123 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
SSBP1-208ENST00000469123 MT1XP80297 61 aa3.58□□□□□ -1.84
SSBP1-208ENST00000469123 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
SSBP1-208ENST00000469123 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
SSBP1-208ENST00000469123 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms