RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
RPL39-202ENST00000468844 PRR15LQ9BU68 103 aa8.93□□□□□ -0.98
RPL39-202ENST00000468844 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
RPL39-202ENST00000468844 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
RPL39-202ENST00000468844 FLGP20930 4061 aaPredicted RBP8.88□□□□□ -0.99
RPL39-202ENST00000468844 ACYP2P14621 99 aa8.85□□□□□ -0.99
RPL39-202ENST00000468844 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -1
RPL39-202ENST00000468844 RBM12B-AS1Q9P1G2 102 aa8.84□□□□□ -1
RPL39-202ENST00000468844 DMAC1Q96GE9 116 aa8.82□□□□□ -1
RPL39-202ENST00000468844 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
RPL39-202ENST00000468844 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
RPL39-202ENST00000468844 A8MU10 97 aa8.79□□□□□ -1
RPL39-202ENST00000468844 A6NED7 52 aa8.77□□□□□ -1.01
RPL39-202ENST00000468844 LCA10Q71F78 164 aa8.74□□□□□ -1.01
RPL39-202ENST00000468844 LCE2CQ5TA81 110 aa8.74□□□□□ -1.01
RPL39-202ENST00000468844 CDC42SE1Q9NRR8 79 aa8.7□□□□□ -1.02
RPL39-202ENST00000468844 H1FX-AS1Q4G0G2 97 aa8.68□□□□□ -1.02
RPL39-202ENST00000468844 PMAIP1Q13794 54 aa8.64□□□□□ -1.03
RPL39-202ENST00000468844 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
RPL39-202ENST00000468844 A0A1B0GU69 56 aa8.56□□□□□ -1.04
RPL39-202ENST00000468844 MT1HP80294 61 aa8.56□□□□□ -1.04
RPL39-202ENST00000468844 S4R3F8 94 aa8.56□□□□□ -1.04
RPL39-202ENST00000468844 A6NN06 94 aa8.52□□□□□ -1.05
RPL39-202ENST00000468844 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
RPL39-202ENST00000468844 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
RPL39-202ENST00000468844 KTN1-AS1Q86SY8 53 aa8.44□□□□□ -1.06
RPL39-202ENST00000468844 M0R2T5 61 aa8.43□□□□□ -1.06
RPL39-202ENST00000468844 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
RPL39-202ENST00000468844 UQCR11O14957 56 aa8.41□□□□□ -1.06
RPL39-202ENST00000468844 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
RPL39-202ENST00000468844 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
RPL39-202ENST00000468844 SEC61GP60059 68 aa8.33□□□□□ -1.08
RPL39-202ENST00000468844 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
RPL39-202ENST00000468844 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
RPL39-202ENST00000468844 KRTAP9-8Q9BYQ0 159 aa8.21□□□□□ -1.09
RPL39-202ENST00000468844 H0YAA0 97 aa8.19□□□□□ -1.1
RPL39-202ENST00000468844 MT2AP02795 61 aa8.16□□□□□ -1.1
RPL39-202ENST00000468844 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.11
RPL39-202ENST00000468844 A0A1B0GU33 70 aa8.13□□□□□ -1.11
RPL39-202ENST00000468844 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
RPL39-202ENST00000468844 MT1FP04733 61 aa8.11□□□□□ -1.11
RPL39-202ENST00000468844 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
RPL39-202ENST00000468844 P0C880 135 aa8.09□□□□□ -1.11
RPL39-202ENST00000468844 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
RPL39-202ENST00000468844 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
RPL39-202ENST00000468844 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
RPL39-202ENST00000468844 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
RPL39-202ENST00000468844 R4GN34 69 aa7.89□□□□□ -1.15
RPL39-202ENST00000468844 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
RPL39-202ENST00000468844 M0QZ58 72 aa7.86□□□□□ -1.15
RPL39-202ENST00000468844 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
RPL39-202ENST00000468844 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
RPL39-202ENST00000468844 K7ERS5 55 aa7.84□□□□□ -1.15
RPL39-202ENST00000468844 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
RPL39-202ENST00000468844 USH2AO75445 5202 aa7.79□□□□□ -1.16
RPL39-202ENST00000468844 LCE2BO14633 110 aa7.77□□□□□ -1.17
RPL39-202ENST00000468844 FSIP2Q5CZC0 6907 aa7.72□□□□□ -1.17
RPL39-202ENST00000468844 A0A0D9SG42 100 aa7.7□□□□□ -1.18
RPL39-202ENST00000468844 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
RPL39-202ENST00000468844 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
RPL39-202ENST00000468844 ROMO1P60602 79 aa7.65□□□□□ -1.18
RPL39-202ENST00000468844 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
RPL39-202ENST00000468844 MT1BP07438 61 aa7.62□□□□□ -1.19
RPL39-202ENST00000468844 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
RPL39-202ENST00000468844 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
RPL39-202ENST00000468844 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
RPL39-202ENST00000468844 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
RPL39-202ENST00000468844 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
RPL39-202ENST00000468844 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
RPL39-202ENST00000468844 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
RPL39-202ENST00000468844 C10orf95Q9H7T3 257 aa7.33□□□□□ -1.24
RPL39-202ENST00000468844 MT1XP80297 61 aa7.31□□□□□ -1.24
RPL39-202ENST00000468844 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
RPL39-202ENST00000468844 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
RPL39-202ENST00000468844 CRCT1Q9UGL9 99 aa7.28□□□□□ -1.24
RPL39-202ENST00000468844 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
RPL39-202ENST00000468844 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
RPL39-202ENST00000468844 KMT2DO14686 5537 aa7.07□□□□□ -1.28
RPL39-202ENST00000468844 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
RPL39-202ENST00000468844 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
RPL39-202ENST00000468844 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
RPL39-202ENST00000468844 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
RPL39-202ENST00000468844 TNP1P09430 55 aa6.93□□□□□ -1.3
RPL39-202ENST00000468844 H3BS24 57 aa6.91□□□□□ -1.3
RPL39-202ENST00000468844 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
RPL39-202ENST00000468844 PP632Q6XCG6 107 aa6.84□□□□□ -1.32
RPL39-202ENST00000468844 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
RPL39-202ENST00000468844 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
RPL39-202ENST00000468844 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
RPL39-202ENST00000468844 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
RPL39-202ENST00000468844 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
RPL39-202ENST00000468844 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
RPL39-202ENST00000468844 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
RPL39-202ENST00000468844 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
RPL39-202ENST00000468844 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
RPL39-202ENST00000468844 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
RPL39-202ENST00000468844 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
RPL39-202ENST00000468844 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
RPL39-202ENST00000468844 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
RPL39-202ENST00000468844 MDN1Q9NU22 5596 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms