RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 RYR2Q92736 4967 aa4.85□□□□□ -1.63
LCA5-203ENST00000467898 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
LCA5-203ENST00000467898 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
LCA5-203ENST00000467898 KRTAP13-2Q52LG2 175 aa4.81□□□□□ -1.64
LCA5-203ENST00000467898 S4R3F8 94 aa4.81□□□□□ -1.64
LCA5-203ENST00000467898 KRTAP1-4P0C5Y4 121 aa4.8□□□□□ -1.64
LCA5-203ENST00000467898 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
LCA5-203ENST00000467898 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
LCA5-203ENST00000467898 KMT2CQ8NEZ4 4911 aaKnown RBP4.77□□□□□ -1.65
LCA5-203ENST00000467898 PKHD1L1Q86WI1 4243 aa4.77□□□□□ -1.65
LCA5-203ENST00000467898 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
LCA5-203ENST00000467898 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
LCA5-203ENST00000467898 A0A0D9SG42 100 aa4.74□□□□□ -1.65
LCA5-203ENST00000467898 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
LCA5-203ENST00000467898 FAT1Q14517 4588 aa4.74□□□□□ -1.65
LCA5-203ENST00000467898 KRTAP10-4P60372 401 aaPredicted RBP4.72□□□□□ -1.65
LCA5-203ENST00000467898 RYR3Q15413 4870 aa4.68□□□□□ -1.66
LCA5-203ENST00000467898 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
LCA5-203ENST00000467898 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
LCA5-203ENST00000467898 HSPG2P98160 4391 aa4.65□□□□□ -1.66
LCA5-203ENST00000467898 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
LCA5-203ENST00000467898 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
LCA5-203ENST00000467898 TNXBP22105 4242 aa4.62□□□□□ -1.67
LCA5-203ENST00000467898 INE1O15225 51 aa4.61□□□□□ -1.67
LCA5-203ENST00000467898 RYR1P21817 5038 aa4.59□□□□□ -1.68
LCA5-203ENST00000467898 R4GN34 69 aa4.57□□□□□ -1.68
LCA5-203ENST00000467898 FAT3Q8TDW7 4589 aa4.57□□□□□ -1.68
LCA5-203ENST00000467898 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
LCA5-203ENST00000467898 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
LCA5-203ENST00000467898 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
LCA5-203ENST00000467898 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
LCA5-203ENST00000467898 M0QZ58 72 aa4.51□□□□□ -1.69
LCA5-203ENST00000467898 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
LCA5-203ENST00000467898 Q5VSD8 79 aa4.5□□□□□ -1.69
LCA5-203ENST00000467898 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
LCA5-203ENST00000467898 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
LCA5-203ENST00000467898 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
LCA5-203ENST00000467898 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
LCA5-203ENST00000467898 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
LCA5-203ENST00000467898 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
LCA5-203ENST00000467898 MYCBP2O75592 4640 aa4.41□□□□□ -1.7
LCA5-203ENST00000467898 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
LCA5-203ENST00000467898 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
LCA5-203ENST00000467898 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
LCA5-203ENST00000467898 ABCA13Q86UQ4 5058 aa4.29□□□□□ -1.72
LCA5-203ENST00000467898 LPAP08519 4548 aa4.29□□□□□ -1.72
LCA5-203ENST00000467898 LRP2P98164 4655 aa4.24□□□□□ -1.73
LCA5-203ENST00000467898 HERC2O95714 4834 aa4.23□□□□□ -1.73
LCA5-203ENST00000467898 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
LCA5-203ENST00000467898 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
LCA5-203ENST00000467898 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
LCA5-203ENST00000467898 TNP1P09430 55 aa4.01□□□□□ -1.77
LCA5-203ENST00000467898 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
LCA5-203ENST00000467898 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
LCA5-203ENST00000467898 HERC1Q15751 4861 aa3.98□□□□□ -1.77
LCA5-203ENST00000467898 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
LCA5-203ENST00000467898 MUC2Q02817 5179 aa3.92□□□□□ -1.78
LCA5-203ENST00000467898 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
LCA5-203ENST00000467898 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.79
LCA5-203ENST00000467898 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
LCA5-203ENST00000467898 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
LCA5-203ENST00000467898 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
LCA5-203ENST00000467898 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
LCA5-203ENST00000467898 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
LCA5-203ENST00000467898 MT1HP80294 61 aa3.7□□□□□ -1.82
LCA5-203ENST00000467898 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
LCA5-203ENST00000467898 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
LCA5-203ENST00000467898 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
LCA5-203ENST00000467898 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
LCA5-203ENST00000467898 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
LCA5-203ENST00000467898 KRTAP19-1Q8IUB9 90 aa3.6□□□□□ -1.83
LCA5-203ENST00000467898 MT2AP02795 61 aa3.59□□□□□ -1.83
LCA5-203ENST00000467898 MT1FP04733 61 aa3.59□□□□□ -1.84
LCA5-203ENST00000467898 M0R2T5 61 aa3.57□□□□□ -1.84
LCA5-203ENST00000467898 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
LCA5-203ENST00000467898 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
LCA5-203ENST00000467898 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
LCA5-203ENST00000467898 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
LCA5-203ENST00000467898 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.85
LCA5-203ENST00000467898 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
LCA5-203ENST00000467898 MT1BP07438 61 aa3.45□□□□□ -1.86
LCA5-203ENST00000467898 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
LCA5-203ENST00000467898 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
LCA5-203ENST00000467898 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
LCA5-203ENST00000467898 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
LCA5-203ENST00000467898 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
LCA5-203ENST00000467898 LCE2AQ5TA79 106 aaPredicted RBP3.43□□□□□ -1.86
LCA5-203ENST00000467898 MT1XP80297 61 aa3.37□□□□□ -1.87
LCA5-203ENST00000467898 LCE2BO14633 110 aa3.34□□□□□ -1.87
LCA5-203ENST00000467898 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
LCA5-203ENST00000467898 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
LCA5-203ENST00000467898 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
LCA5-203ENST00000467898 USH2AO75445 5202 aa3.24□□□□□ -1.89
LCA5-203ENST00000467898 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
LCA5-203ENST00000467898 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
LCA5-203ENST00000467898 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
LCA5-203ENST00000467898 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
LCA5-203ENST00000467898 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
LCA5-203ENST00000467898 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
LCA5-203ENST00000467898 KMT2DO14686 5537 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms