RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 HERC2O95714 4834 aa10.48□□□□□ -0.73
CCDC78-207ENST00000466708 LCA10Q71F78 164 aa10.48□□□□□ -0.73
CCDC78-207ENST00000466708 A8MU10 97 aa10.42□□□□□ -0.74
CCDC78-207ENST00000466708 LRP2P98164 4655 aa10.42□□□□□ -0.74
CCDC78-207ENST00000466708 UQCR11O14957 56 aa10.39□□□□□ -0.75
CCDC78-207ENST00000466708 SEC61BP60468 96 aaKnown RBP10.39□□□□□ -0.75
CCDC78-207ENST00000466708 LPAP08519 4548 aa10.36□□□□□ -0.75
CCDC78-207ENST00000466708 H1FX-AS1Q4G0G2 97 aa10.35□□□□□ -0.75
CCDC78-207ENST00000466708 RBM12B-AS1Q9P1G2 102 aa10.35□□□□□ -0.75
CCDC78-207ENST00000466708 S4R3F8 94 aa10.35□□□□□ -0.75
CCDC78-207ENST00000466708 SPATA8Q6RVD6 105 aa10.32□□□□□ -0.76
CCDC78-207ENST00000466708 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
CCDC78-207ENST00000466708 MIR22HGQ0VDD5 57 aa10.28□□□□□ -0.76
CCDC78-207ENST00000466708 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
CCDC78-207ENST00000466708 A0A1B0GU33 70 aa10.19□□□□□ -0.78
CCDC78-207ENST00000466708 CSAG1Q6PB30 78 aa10.09□□□□□ -0.79
CCDC78-207ENST00000466708 A6NN06 94 aa10.08□□□□□ -0.8
CCDC78-207ENST00000466708 KRTAP4-1Q9BYQ7 146 aa10.08□□□□□ -0.8
CCDC78-207ENST00000466708 H0YAA0 97 aa10.07□□□□□ -0.8
CCDC78-207ENST00000466708 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
CCDC78-207ENST00000466708 MUC17Q685J3 4493 aa10.05□□□□□ -0.8
CCDC78-207ENST00000466708 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
CCDC78-207ENST00000466708 PCLOQ9Y6V0 5065 aa9.97□□□□□ -0.81
CCDC78-207ENST00000466708 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
CCDC78-207ENST00000466708 P0C880 135 aa9.92□□□□□ -0.82
CCDC78-207ENST00000466708 KRTAP19-2Q3LHN2 52 aa9.9□□□□□ -0.82
CCDC78-207ENST00000466708 KTN1-AS1Q86SY8 53 aa9.89□□□□□ -0.83
CCDC78-207ENST00000466708 HERC1Q15751 4861 aa9.87□□□□□ -0.83
CCDC78-207ENST00000466708 HMCN2Q8NDA2 5059 aa9.84□□□□□ -0.83
CCDC78-207ENST00000466708 KRTAP13-4Q3LI77 160 aa9.83□□□□□ -0.84
CCDC78-207ENST00000466708 K7ERS5 55 aa9.78□□□□□ -0.84
CCDC78-207ENST00000466708 M0QZ58 72 aa9.75□□□□□ -0.85
CCDC78-207ENST00000466708 A0A0D9SG42 100 aa9.69□□□□□ -0.86
CCDC78-207ENST00000466708 MUC2Q02817 5179 aa9.61□□□□□ -0.87
CCDC78-207ENST00000466708 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
CCDC78-207ENST00000466708 R4GN34 69 aa9.57□□□□□ -0.88
CCDC78-207ENST00000466708 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
CCDC78-207ENST00000466708 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
CCDC78-207ENST00000466708 KRTAP12-2P59991 146 aa9.48□□□□□ -0.89
CCDC78-207ENST00000466708 PRAC1Q96KF2 57 aa9.48□□□□□ -0.89
CCDC78-207ENST00000466708 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
CCDC78-207ENST00000466708 SPINT4Q6UDR6 99 aa9.45□□□□□ -0.9
CCDC78-207ENST00000466708 ROMO1P60602 79 aa9.41□□□□□ -0.9
CCDC78-207ENST00000466708 LINC01554Q52M75 96 aa9.39□□□□□ -0.91
CCDC78-207ENST00000466708 CRIPTQ9P021 101 aa9.36□□□□□ -0.91
CCDC78-207ENST00000466708 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
CCDC78-207ENST00000466708 UBR4Q5T4S7 5183 aa9.3□□□□□ -0.92
CCDC78-207ENST00000466708 MT1HP80294 61 aa9.3□□□□□ -0.92
CCDC78-207ENST00000466708 M0R2T5 61 aa9.26□□□□□ -0.93
CCDC78-207ENST00000466708 KRTAP25-1Q3LHN0 102 aa9.21□□□□□ -0.94
CCDC78-207ENST00000466708 FAT4Q6V0I7 4981 aa9.19□□□□□ -0.94
CCDC78-207ENST00000466708 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
CCDC78-207ENST00000466708 MT2AP02795 61 aa9.02□□□□□ -0.97
CCDC78-207ENST00000466708 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
CCDC78-207ENST00000466708 CAMK2N1Q7Z7J9 78 aa9.01□□□□□ -0.97
CCDC78-207ENST00000466708 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
CCDC78-207ENST00000466708 MT1FP04733 61 aa8.97□□□□□ -0.97
CCDC78-207ENST00000466708 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
CCDC78-207ENST00000466708 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.98
CCDC78-207ENST00000466708 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
CCDC78-207ENST00000466708 KRTAP19-8Q3LI54 63 aa8.75□□□□□ -1.01
CCDC78-207ENST00000466708 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
CCDC78-207ENST00000466708 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
CCDC78-207ENST00000466708 TNP1P09430 55 aa8.64□□□□□ -1.03
CCDC78-207ENST00000466708 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
CCDC78-207ENST00000466708 MT1BP07438 61 aa8.59□□□□□ -1.03
CCDC78-207ENST00000466708 KRTAP23-1A1A580 65 aa8.52□□□□□ -1.05
CCDC78-207ENST00000466708 MT1XP80297 61 aa8.39□□□□□ -1.07
CCDC78-207ENST00000466708 KRTAP10-5P60370 271 aa8.38□□□□□ -1.07
CCDC78-207ENST00000466708 LCE2BO14633 110 aa8.36□□□□□ -1.07
CCDC78-207ENST00000466708 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
CCDC78-207ENST00000466708 KRTAP15-1Q3LI76 137 aa8.24□□□□□ -1.09
CCDC78-207ENST00000466708 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
CCDC78-207ENST00000466708 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
CCDC78-207ENST00000466708 KRTAP10-7P60409 375 aaPredicted RBP8.07□□□□□ -1.12
CCDC78-207ENST00000466708 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
CCDC78-207ENST00000466708 USH2AO75445 5202 aa7.98□□□□□ -1.13
CCDC78-207ENST00000466708 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
CCDC78-207ENST00000466708 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
CCDC78-207ENST00000466708 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
CCDC78-207ENST00000466708 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
CCDC78-207ENST00000466708 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
CCDC78-207ENST00000466708 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
CCDC78-207ENST00000466708 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
CCDC78-207ENST00000466708 LUZP6Q538Z0 58 aa7.71□□□□□ -1.18
CCDC78-207ENST00000466708 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
CCDC78-207ENST00000466708 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
CCDC78-207ENST00000466708 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
CCDC78-207ENST00000466708 KMT2DO14686 5537 aa7.51□□□□□ -1.21
CCDC78-207ENST00000466708 KRTAP19-7Q3SYF9 63 aa7.48□□□□□ -1.21
CCDC78-207ENST00000466708 KRTAP9-6A0A140TA67 174 aa7.47□□□□□ -1.21
CCDC78-207ENST00000466708 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
CCDC78-207ENST00000466708 H3BS24 57 aa7.39□□□□□ -1.23
CCDC78-207ENST00000466708 LCE3CQ5T5A8 94 aa7.37□□□□□ -1.23
CCDC78-207ENST00000466708 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
CCDC78-207ENST00000466708 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
CCDC78-207ENST00000466708 MT1EP04732 61 aa7.33□□□□□ -1.24
CCDC78-207ENST00000466708 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
CCDC78-207ENST00000466708 MT1LQ93083 61 aa7.24□□□□□ -1.25
CCDC78-207ENST00000466708 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms