RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 LINC00304Q8N9R0 145 aa8.21□□□□□ -1.09
GAPDH-206ENST00000466525 A8MUU9 505 aa8.2□□□□□ -1.1
GAPDH-206ENST00000466525 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
GAPDH-206ENST00000466525 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
GAPDH-206ENST00000466525 H0YAA0 97 aa8.13□□□□□ -1.11
GAPDH-206ENST00000466525 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
GAPDH-206ENST00000466525 A0A1B0GU33 70 aa8.09□□□□□ -1.11
GAPDH-206ENST00000466525 H1FX-AS1Q4G0G2 97 aa8.08□□□□□ -1.12
GAPDH-206ENST00000466525 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
GAPDH-206ENST00000466525 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
GAPDH-206ENST00000466525 LRP1Q07954 4544 aaKnown RBP8.02□□□□□ -1.13
GAPDH-206ENST00000466525 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
GAPDH-206ENST00000466525 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
GAPDH-206ENST00000466525 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
GAPDH-206ENST00000466525 KRTAP10-4P60372 401 aaPredicted RBP7.98□□□□□ -1.13
GAPDH-206ENST00000466525 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
GAPDH-206ENST00000466525 K7ERS5 55 aa7.94□□□□□ -1.14
GAPDH-206ENST00000466525 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
GAPDH-206ENST00000466525 LRP2P98164 4655 aa7.85□□□□□ -1.15
GAPDH-206ENST00000466525 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
GAPDH-206ENST00000466525 TNXBP22105 4242 aa7.82□□□□□ -1.16
GAPDH-206ENST00000466525 ROMO1P60602 79 aa7.78□□□□□ -1.16
GAPDH-206ENST00000466525 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
GAPDH-206ENST00000466525 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
GAPDH-206ENST00000466525 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
GAPDH-206ENST00000466525 H3BS24 57 aa7.69□□□□□ -1.18
GAPDH-206ENST00000466525 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
GAPDH-206ENST00000466525 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
GAPDH-206ENST00000466525 S4R3F8 94 aa7.65□□□□□ -1.18
GAPDH-206ENST00000466525 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
GAPDH-206ENST00000466525 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
GAPDH-206ENST00000466525 XP32Q5T750 250 aa7.58□□□□□ -1.2
GAPDH-206ENST00000466525 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
GAPDH-206ENST00000466525 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
GAPDH-206ENST00000466525 A0A0D9SG42 100 aa7.5□□□□□ -1.21
GAPDH-206ENST00000466525 KRTAP9-6A0A140TA67 174 aa7.5□□□□□ -1.21
GAPDH-206ENST00000466525 P0C880 135 aa7.49□□□□□ -1.21
GAPDH-206ENST00000466525 LPAP08519 4548 aa7.47□□□□□ -1.21
GAPDH-206ENST00000466525 M0QZ58 72 aa7.44□□□□□ -1.22
GAPDH-206ENST00000466525 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
GAPDH-206ENST00000466525 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
GAPDH-206ENST00000466525 MUC2Q02817 5179 aa7.41□□□□□ -1.22
GAPDH-206ENST00000466525 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
GAPDH-206ENST00000466525 FAT4Q6V0I7 4981 aa7.37□□□□□ -1.23
GAPDH-206ENST00000466525 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
GAPDH-206ENST00000466525 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
GAPDH-206ENST00000466525 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
GAPDH-206ENST00000466525 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
GAPDH-206ENST00000466525 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
GAPDH-206ENST00000466525 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
GAPDH-206ENST00000466525 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
GAPDH-206ENST00000466525 R4GN34 69 aa7.07□□□□□ -1.28
GAPDH-206ENST00000466525 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
GAPDH-206ENST00000466525 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
GAPDH-206ENST00000466525 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
GAPDH-206ENST00000466525 PLAC4Q8WY50 150 aa6.9□□□□□ -1.31
GAPDH-206ENST00000466525 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
GAPDH-206ENST00000466525 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
GAPDH-206ENST00000466525 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
GAPDH-206ENST00000466525 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
GAPDH-206ENST00000466525 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
GAPDH-206ENST00000466525 MT1HP80294 61 aa6.73□□□□□ -1.33
GAPDH-206ENST00000466525 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
GAPDH-206ENST00000466525 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
GAPDH-206ENST00000466525 M0R2T5 61 aa6.64□□□□□ -1.35
GAPDH-206ENST00000466525 LUZP6Q538Z0 58 aa6.64□□□□□ -1.35
GAPDH-206ENST00000466525 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
GAPDH-206ENST00000466525 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
GAPDH-206ENST00000466525 TNP1P09430 55 aa6.58□□□□□ -1.36
GAPDH-206ENST00000466525 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
GAPDH-206ENST00000466525 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
GAPDH-206ENST00000466525 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
GAPDH-206ENST00000466525 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
GAPDH-206ENST00000466525 USH2AO75445 5202 aa6.35□□□□□ -1.39
GAPDH-206ENST00000466525 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
GAPDH-206ENST00000466525 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
GAPDH-206ENST00000466525 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
GAPDH-206ENST00000466525 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
GAPDH-206ENST00000466525 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
GAPDH-206ENST00000466525 LCE2BO14633 110 aa6.16□□□□□ -1.42
GAPDH-206ENST00000466525 MT2AP02795 61 aa6.15□□□□□ -1.42
GAPDH-206ENST00000466525 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
GAPDH-206ENST00000466525 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
GAPDH-206ENST00000466525 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
GAPDH-206ENST00000466525 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
GAPDH-206ENST00000466525 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
GAPDH-206ENST00000466525 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
GAPDH-206ENST00000466525 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
GAPDH-206ENST00000466525 MT1FP04733 61 aa6.08□□□□□ -1.44
GAPDH-206ENST00000466525 INE1O15225 51 aa5.94□□□□□ -1.46
GAPDH-206ENST00000466525 NEBP20929 6669 aa5.94□□□□□ -1.46
GAPDH-206ENST00000466525 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
GAPDH-206ENST00000466525 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
GAPDH-206ENST00000466525 MT1BP07438 61 aa5.91□□□□□ -1.46
GAPDH-206ENST00000466525 MT1XP80297 61 aa5.91□□□□□ -1.46
GAPDH-206ENST00000466525 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
GAPDH-206ENST00000466525 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
GAPDH-206ENST00000466525 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
GAPDH-206ENST00000466525 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
GAPDH-206ENST00000466525 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms