RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 SPTSSBQ8NFR3 76 aa10.7□□□□□ -0.7
PPP1R3F-203ENST00000466508 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
PPP1R3F-203ENST00000466508 Q5VV11 94 aa10.66□□□□□ -0.7
PPP1R3F-203ENST00000466508 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
PPP1R3F-203ENST00000466508 H1FX-AS1Q4G0G2 97 aa10.61□□□□□ -0.71
PPP1R3F-203ENST00000466508 KRTAP4-1Q9BYQ7 146 aa10.61□□□□□ -0.71
PPP1R3F-203ENST00000466508 A0A1B0GU69 56 aa10.57□□□□□ -0.72
PPP1R3F-203ENST00000466508 S4R3F8 94 aa10.57□□□□□ -0.72
PPP1R3F-203ENST00000466508 LCA10Q71F78 164 aa10.57□□□□□ -0.72
PPP1R3F-203ENST00000466508 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
PPP1R3F-203ENST00000466508 MUC2Q02817 5179 aa10.47□□□□□ -0.73
PPP1R3F-203ENST00000466508 SEC61GP60059 68 aa10.46□□□□□ -0.74
PPP1R3F-203ENST00000466508 BRK1Q8WUW1 75 aa10.44□□□□□ -0.74
PPP1R3F-203ENST00000466508 A6NED7 52 aa10.43□□□□□ -0.74
PPP1R3F-203ENST00000466508 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
PPP1R3F-203ENST00000466508 CSAG1Q6PB30 78 aa10.31□□□□□ -0.76
PPP1R3F-203ENST00000466508 UQCR11O14957 56 aa10.28□□□□□ -0.76
PPP1R3F-203ENST00000466508 PRO0628Q9UI54 55 aa10.28□□□□□ -0.76
PPP1R3F-203ENST00000466508 CDC42SE1Q9NRR8 79 aa10.27□□□□□ -0.77
PPP1R3F-203ENST00000466508 A8MU10 97 aa10.25□□□□□ -0.77
PPP1R3F-203ENST00000466508 KRTAP10-6P60371 365 aaPredicted RBP10.21□□□□□ -0.78
PPP1R3F-203ENST00000466508 A0A1B0GU33 70 aa10.2□□□□□ -0.78
PPP1R3F-203ENST00000466508 KRTAP3-2Q9BYR7 98 aa10.2□□□□□ -0.78
PPP1R3F-203ENST00000466508 FLGP20930 4061 aaPredicted RBP10.19□□□□□ -0.78
PPP1R3F-203ENST00000466508 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
PPP1R3F-203ENST00000466508 SPATA8Q6RVD6 105 aa10.17□□□□□ -0.78
PPP1R3F-203ENST00000466508 FAT4Q6V0I7 4981 aa10.16□□□□□ -0.78
PPP1R3F-203ENST00000466508 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
PPP1R3F-203ENST00000466508 H0YAA0 97 aa10.12□□□□□ -0.79
PPP1R3F-203ENST00000466508 P0C880 135 aa10.1□□□□□ -0.79
PPP1R3F-203ENST00000466508 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
PPP1R3F-203ENST00000466508 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
PPP1R3F-203ENST00000466508 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
PPP1R3F-203ENST00000466508 PMAIP1Q13794 54 aa9.87□□□□□ -0.83
PPP1R3F-203ENST00000466508 M0QZ58 72 aa9.85□□□□□ -0.83
PPP1R3F-203ENST00000466508 MT1HP80294 61 aa9.83□□□□□ -0.84
PPP1R3F-203ENST00000466508 A6NN06 94 aa9.79□□□□□ -0.84
PPP1R3F-203ENST00000466508 A0A0D9SG42 100 aa9.77□□□□□ -0.85
PPP1R3F-203ENST00000466508 R4GN34 69 aa9.76□□□□□ -0.85
PPP1R3F-203ENST00000466508 M0R2T5 61 aa9.76□□□□□ -0.85
PPP1R3F-203ENST00000466508 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
PPP1R3F-203ENST00000466508 K7ERS5 55 aa9.68□□□□□ -0.86
PPP1R3F-203ENST00000466508 KRTAP9-2Q9BYQ4 174 aa9.68□□□□□ -0.86
PPP1R3F-203ENST00000466508 CRIPTQ9P021 101 aa9.61□□□□□ -0.87
PPP1R3F-203ENST00000466508 LINC01554Q52M75 96 aa9.59□□□□□ -0.87
PPP1R3F-203ENST00000466508 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
PPP1R3F-203ENST00000466508 KRTAP12-2P59991 146 aa9.57□□□□□ -0.88
PPP1R3F-203ENST00000466508 SPINT4Q6UDR6 99 aa9.52□□□□□ -0.89
PPP1R3F-203ENST00000466508 KTN1-AS1Q86SY8 53 aa9.51□□□□□ -0.89
PPP1R3F-203ENST00000466508 KRTAP9-8Q9BYQ0 159 aa9.5□□□□□ -0.89
PPP1R3F-203ENST00000466508 MT2AP02795 61 aa9.49□□□□□ -0.89
PPP1R3F-203ENST00000466508 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
PPP1R3F-203ENST00000466508 MT1FP04733 61 aa9.44□□□□□ -0.9
PPP1R3F-203ENST00000466508 KRTAP10-10P60014 251 aa9.41□□□□□ -0.9
PPP1R3F-203ENST00000466508 SPRR2GQ9BYE4 73 aa9.38□□□□□ -0.91
PPP1R3F-203ENST00000466508 KRTAP19-1Q8IUB9 90 aa9.34□□□□□ -0.91
PPP1R3F-203ENST00000466508 ROMO1P60602 79 aa9.31□□□□□ -0.92
PPP1R3F-203ENST00000466508 KRTAP9-6A0A140TA67 174 aa9.3□□□□□ -0.92
PPP1R3F-203ENST00000466508 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.93
PPP1R3F-203ENST00000466508 PRAC1Q96KF2 57 aa9.23□□□□□ -0.93
PPP1R3F-203ENST00000466508 CRCT1Q9UGL9 99 aa9.18□□□□□ -0.94
PPP1R3F-203ENST00000466508 CAMK2N1Q7Z7J9 78 aa9.16□□□□□ -0.94
PPP1R3F-203ENST00000466508 KRTAP9-3Q9BYQ3 159 aa9.15□□□□□ -0.95
PPP1R3F-203ENST00000466508 KRTAP19-8Q3LI54 63 aa9.11□□□□□ -0.95
PPP1R3F-203ENST00000466508 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
PPP1R3F-203ENST00000466508 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
PPP1R3F-203ENST00000466508 MT1BP07438 61 aa8.98□□□□□ -0.97
PPP1R3F-203ENST00000466508 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
PPP1R3F-203ENST00000466508 USH2AO75445 5202 aa8.89□□□□□ -0.99
PPP1R3F-203ENST00000466508 LCE2BO14633 110 aa8.87□□□□□ -0.99
PPP1R3F-203ENST00000466508 SSPOA2VEC9 5147 aa8.8□□□□□ -1
PPP1R3F-203ENST00000466508 TNP1P09430 55 aa8.74□□□□□ -1.01
PPP1R3F-203ENST00000466508 MT1XP80297 61 aa8.72□□□□□ -1.01
PPP1R3F-203ENST00000466508 KRTAP10-5P60370 271 aa8.71□□□□□ -1.01
PPP1R3F-203ENST00000466508 PRO2289Q9P1D8 64 aa8.6□□□□□ -1.03
PPP1R3F-203ENST00000466508 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
PPP1R3F-203ENST00000466508 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
PPP1R3F-203ENST00000466508 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
PPP1R3F-203ENST00000466508 KRTAP23-1A1A580 65 aa8.52□□□□□ -1.05
PPP1R3F-203ENST00000466508 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
PPP1R3F-203ENST00000466508 KRTAP9-7A8MTY7 169 aa8.38□□□□□ -1.07
PPP1R3F-203ENST00000466508 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
PPP1R3F-203ENST00000466508 H3BS24 57 aa8.38□□□□□ -1.07
PPP1R3F-203ENST00000466508 LCE3AQ5TA76 89 aa8.34□□□□□ -1.07
PPP1R3F-203ENST00000466508 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
PPP1R3F-203ENST00000466508 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
PPP1R3F-203ENST00000466508 SYNE2Q8WXH0 6885 aaKnown RBP8.21□□□□□ -1.09
PPP1R3F-203ENST00000466508 KRTAP8-1Q8IUC2 63 aa8.19□□□□□ -1.1
PPP1R3F-203ENST00000466508 KMT2DO14686 5537 aa8.05□□□□□ -1.12
PPP1R3F-203ENST00000466508 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.12
PPP1R3F-203ENST00000466508 KRTAP4-8A0A0G2JLE6 195 aa8.01□□□□□ -1.13
PPP1R3F-203ENST00000466508 KRTAP12-3P60328 96 aa8.01□□□□□ -1.13
PPP1R3F-203ENST00000466508 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
PPP1R3F-203ENST00000466508 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
PPP1R3F-203ENST00000466508 KRTAP19-5Q3LI72 72 aa7.91□□□□□ -1.14
PPP1R3F-203ENST00000466508 KRTAP19-7Q3SYF9 63 aa7.79□□□□□ -1.16
PPP1R3F-203ENST00000466508 KRTAP5-9P26371 169 aa7.71□□□□□ -1.18
PPP1R3F-203ENST00000466508 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
PPP1R3F-203ENST00000466508 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
PPP1R3F-203ENST00000466508 NEBP20929 6669 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms