RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
PMF1-204ENST00000466489 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
PMF1-204ENST00000466489 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
PMF1-204ENST00000466489 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
PMF1-204ENST00000466489 SPINK7P58062 85 aa5.48□□□□□ -1.53
PMF1-204ENST00000466489 C9orf92A6NGG3 77 aa5.46□□□□□ -1.54
PMF1-204ENST00000466489 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
PMF1-204ENST00000466489 LRP2P98164 4655 aa5.44□□□□□ -1.54
PMF1-204ENST00000466489 XP32Q5T750 250 aa5.43□□□□□ -1.54
PMF1-204ENST00000466489 LPAP08519 4548 aa5.42□□□□□ -1.54
PMF1-204ENST00000466489 K7ERS5 55 aa5.42□□□□□ -1.54
PMF1-204ENST00000466489 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
PMF1-204ENST00000466489 A8MUU9 505 aa5.4□□□□□ -1.54
PMF1-204ENST00000466489 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
PMF1-204ENST00000466489 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
PMF1-204ENST00000466489 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
PMF1-204ENST00000466489 A8MU10 97 aa5.33□□□□□ -1.56
PMF1-204ENST00000466489 A0A1B0GU33 70 aa5.31□□□□□ -1.56
PMF1-204ENST00000466489 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
PMF1-204ENST00000466489 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
PMF1-204ENST00000466489 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
PMF1-204ENST00000466489 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
PMF1-204ENST00000466489 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
PMF1-204ENST00000466489 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
PMF1-204ENST00000466489 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
PMF1-204ENST00000466489 MUC2Q02817 5179 aa5.17□□□□□ -1.58
PMF1-204ENST00000466489 H0YAA0 97 aa5.11□□□□□ -1.59
PMF1-204ENST00000466489 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
PMF1-204ENST00000466489 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
PMF1-204ENST00000466489 S4R3F8 94 aa5.07□□□□□ -1.6
PMF1-204ENST00000466489 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
PMF1-204ENST00000466489 ROMO1P60602 79 aa5.06□□□□□ -1.6
PMF1-204ENST00000466489 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
PMF1-204ENST00000466489 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
PMF1-204ENST00000466489 M0R2T5 61 aa5.03□□□□□ -1.6
PMF1-204ENST00000466489 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
PMF1-204ENST00000466489 M0QZ58 72 aa5.02□□□□□ -1.61
PMF1-204ENST00000466489 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
PMF1-204ENST00000466489 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
PMF1-204ENST00000466489 MT1HP80294 61 aa4.99□□□□□ -1.61
PMF1-204ENST00000466489 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
PMF1-204ENST00000466489 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
PMF1-204ENST00000466489 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
PMF1-204ENST00000466489 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
PMF1-204ENST00000466489 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
PMF1-204ENST00000466489 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
PMF1-204ENST00000466489 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
PMF1-204ENST00000466489 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
PMF1-204ENST00000466489 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
PMF1-204ENST00000466489 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
PMF1-204ENST00000466489 A0A0D9SG42 100 aa4.8□□□□□ -1.64
PMF1-204ENST00000466489 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
PMF1-204ENST00000466489 P0C880 135 aa4.75□□□□□ -1.65
PMF1-204ENST00000466489 R4GN34 69 aa4.74□□□□□ -1.65
PMF1-204ENST00000466489 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
PMF1-204ENST00000466489 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
PMF1-204ENST00000466489 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
PMF1-204ENST00000466489 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
PMF1-204ENST00000466489 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
PMF1-204ENST00000466489 MT2AP02795 61 aa4.7□□□□□ -1.66
PMF1-204ENST00000466489 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
PMF1-204ENST00000466489 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
PMF1-204ENST00000466489 MT1FP04733 61 aa4.66□□□□□ -1.66
PMF1-204ENST00000466489 H3BS24 57 aa4.65□□□□□ -1.67
PMF1-204ENST00000466489 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
PMF1-204ENST00000466489 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
PMF1-204ENST00000466489 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
PMF1-204ENST00000466489 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
PMF1-204ENST00000466489 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
PMF1-204ENST00000466489 LCE2BO14633 110 aa4.49□□□□□ -1.69
PMF1-204ENST00000466489 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
PMF1-204ENST00000466489 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
PMF1-204ENST00000466489 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
PMF1-204ENST00000466489 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
PMF1-204ENST00000466489 TNP1P09430 55 aa4.43□□□□□ -1.7
PMF1-204ENST00000466489 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
PMF1-204ENST00000466489 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
PMF1-204ENST00000466489 USH2AO75445 5202 aa4.38□□□□□ -1.71
PMF1-204ENST00000466489 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
PMF1-204ENST00000466489 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
PMF1-204ENST00000466489 SSPOA2VEC9 5147 aa4.34□□□□□ -1.71
PMF1-204ENST00000466489 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.72
PMF1-204ENST00000466489 MT1BP07438 61 aa4.32□□□□□ -1.72
PMF1-204ENST00000466489 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
PMF1-204ENST00000466489 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
PMF1-204ENST00000466489 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
PMF1-204ENST00000466489 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
PMF1-204ENST00000466489 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
PMF1-204ENST00000466489 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
PMF1-204ENST00000466489 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
PMF1-204ENST00000466489 MT1XP80297 61 aa4.11□□□□□ -1.75
PMF1-204ENST00000466489 NEBP20929 6669 aa4.09□□□□□ -1.75
PMF1-204ENST00000466489 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
PMF1-204ENST00000466489 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
PMF1-204ENST00000466489 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
PMF1-204ENST00000466489 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
PMF1-204ENST00000466489 INE1O15225 51 aa3.93□□□□□ -1.78
PMF1-204ENST00000466489 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
PMF1-204ENST00000466489 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
PMF1-204ENST00000466489 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms