RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 M0R2T5 61 aa5.73□□□□□ -1.49
NPHP3-203ENST00000465756 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
NPHP3-203ENST00000465756 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
NPHP3-203ENST00000465756 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
NPHP3-203ENST00000465756 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
NPHP3-203ENST00000465756 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
NPHP3-203ENST00000465756 A6NN06 94 aa5.68□□□□□ -1.5
NPHP3-203ENST00000465756 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
NPHP3-203ENST00000465756 LRP2P98164 4655 aa5.65□□□□□ -1.51
NPHP3-203ENST00000465756 TP53AIP1Q9HCN2 124 aa5.64□□□□□ -1.51
NPHP3-203ENST00000465756 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
NPHP3-203ENST00000465756 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
NPHP3-203ENST00000465756 UQCR11O14957 56 aa5.62□□□□□ -1.51
NPHP3-203ENST00000465756 HRES1P13985 223 aa5.61□□□□□ -1.51
NPHP3-203ENST00000465756 ACYP2P14621 99 aa5.61□□□□□ -1.51
NPHP3-203ENST00000465756 NOTCH2NLQ7Z3S9 236 aa5.59□□□□□ -1.51
NPHP3-203ENST00000465756 K7ERS5 55 aa5.58□□□□□ -1.52
NPHP3-203ENST00000465756 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
NPHP3-203ENST00000465756 MUC17Q685J3 4493 aa5.57□□□□□ -1.52
NPHP3-203ENST00000465756 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
NPHP3-203ENST00000465756 LINC01558Q9Y6Z2 57 aa5.56□□□□□ -1.52
NPHP3-203ENST00000465756 H3BPC8 53 aa5.55□□□□□ -1.52
NPHP3-203ENST00000465756 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
NPHP3-203ENST00000465756 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
NPHP3-203ENST00000465756 UBR4Q5T4S7 5183 aa5.5□□□□□ -1.53
NPHP3-203ENST00000465756 A0A0D9SG42 100 aa5.48□□□□□ -1.53
NPHP3-203ENST00000465756 LPAP08519 4548 aa5.48□□□□□ -1.53
NPHP3-203ENST00000465756 MT1HP80294 61 aa5.47□□□□□ -1.53
NPHP3-203ENST00000465756 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
NPHP3-203ENST00000465756 Q5W150 140 aa5.44□□□□□ -1.54
NPHP3-203ENST00000465756 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
NPHP3-203ENST00000465756 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
NPHP3-203ENST00000465756 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-203ENST00000465756 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
NPHP3-203ENST00000465756 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
NPHP3-203ENST00000465756 ROMO1P60602 79 aa5.36□□□□□ -1.55
NPHP3-203ENST00000465756 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-203ENST00000465756 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
NPHP3-203ENST00000465756 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.56
NPHP3-203ENST00000465756 S4R3F8 94 aa5.33□□□□□ -1.56
NPHP3-203ENST00000465756 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
NPHP3-203ENST00000465756 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
NPHP3-203ENST00000465756 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
NPHP3-203ENST00000465756 A0A1B0GU33 70 aa5.27□□□□□ -1.57
NPHP3-203ENST00000465756 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
NPHP3-203ENST00000465756 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
NPHP3-203ENST00000465756 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
NPHP3-203ENST00000465756 DMAC1Q96GE9 116 aa5.19□□□□□ -1.58
NPHP3-203ENST00000465756 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
NPHP3-203ENST00000465756 MT2AP02795 61 aa5.15□□□□□ -1.58
NPHP3-203ENST00000465756 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.59
NPHP3-203ENST00000465756 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
NPHP3-203ENST00000465756 P0C880 135 aa5.09□□□□□ -1.6
NPHP3-203ENST00000465756 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
NPHP3-203ENST00000465756 MT1FP04733 61 aa5.06□□□□□ -1.6
NPHP3-203ENST00000465756 H0YAA0 97 aa5.06□□□□□ -1.6
NPHP3-203ENST00000465756 MUC2Q02817 5179 aa5.04□□□□□ -1.6
NPHP3-203ENST00000465756 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
NPHP3-203ENST00000465756 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
NPHP3-203ENST00000465756 R4GN34 69 aa4.94□□□□□ -1.62
NPHP3-203ENST00000465756 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
NPHP3-203ENST00000465756 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
NPHP3-203ENST00000465756 LCE2BO14633 110 aa4.87□□□□□ -1.63
NPHP3-203ENST00000465756 M0QZ58 72 aa4.86□□□□□ -1.63
NPHP3-203ENST00000465756 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
NPHP3-203ENST00000465756 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
NPHP3-203ENST00000465756 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
NPHP3-203ENST00000465756 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
NPHP3-203ENST00000465756 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
NPHP3-203ENST00000465756 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
NPHP3-203ENST00000465756 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
NPHP3-203ENST00000465756 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
NPHP3-203ENST00000465756 MT1BP07438 61 aa4.68□□□□□ -1.66
NPHP3-203ENST00000465756 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
NPHP3-203ENST00000465756 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
NPHP3-203ENST00000465756 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
NPHP3-203ENST00000465756 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
NPHP3-203ENST00000465756 KRTAP3-2Q9BYR7 98 aa4.62□□□□□ -1.67
NPHP3-203ENST00000465756 USH2AO75445 5202 aa4.59□□□□□ -1.67
NPHP3-203ENST00000465756 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
NPHP3-203ENST00000465756 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
NPHP3-203ENST00000465756 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
NPHP3-203ENST00000465756 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
NPHP3-203ENST00000465756 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
NPHP3-203ENST00000465756 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
NPHP3-203ENST00000465756 MT1XP80297 61 aa4.42□□□□□ -1.7
NPHP3-203ENST00000465756 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
NPHP3-203ENST00000465756 TNP1P09430 55 aa4.32□□□□□ -1.72
NPHP3-203ENST00000465756 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
NPHP3-203ENST00000465756 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
NPHP3-203ENST00000465756 SPRR2EP22531 72 aa4.26□□□□□ -1.73
NPHP3-203ENST00000465756 SPRR2BP35325 72 aa4.26□□□□□ -1.73
NPHP3-203ENST00000465756 SPRR2AP35326 72 aa4.26□□□□□ -1.73
NPHP3-203ENST00000465756 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
NPHP3-203ENST00000465756 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
NPHP3-203ENST00000465756 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
NPHP3-203ENST00000465756 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
NPHP3-203ENST00000465756 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
NPHP3-203ENST00000465756 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
NPHP3-203ENST00000465756 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms