RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	RPL37	P61927	97 aa	Known RBP	4.69	□□□□□ -1.66
UBA3-208	ENST00000465627	NDUFS5	O43920	106 aa		4.68	□□□□□ -1.66
UBA3-208	ENST00000465627	CYSTM1	Q9H1C7	97 aa		4.68	□□□□□ -1.66
UBA3-208	ENST00000465627	MACF1	Q9UPN3	7388 aa	Known RBP	4.67	□□□□□ -1.66
UBA3-208	ENST00000465627		A0A0A0MQY5	61 aa		4.67	□□□□□ -1.66
UBA3-208	ENST00000465627	KLKP1	Q107X0	134 aa		4.67	□□□□□ -1.66
UBA3-208	ENST00000465627		H0Y9P7	68 aa		4.66	□□□□□ -1.66
UBA3-208	ENST00000465627		H3BPC8	53 aa		4.65	□□□□□ -1.66
UBA3-208	ENST00000465627	C20orf197	Q8N268	126 aa		4.65	□□□□□ -1.66
UBA3-208	ENST00000465627	NEB	P20929	6669 aa		4.65	□□□□□ -1.67
UBA3-208	ENST00000465627		V9GYY9	64 aa		4.65	□□□□□ -1.67
UBA3-208	ENST00000465627	USH2A	O75445	5202 aa		4.64	□□□□□ -1.67
UBA3-208	ENST00000465627	LINC00208	Q96KT6	92 aa		4.64	□□□□□ -1.67
UBA3-208	ENST00000465627	IGKV2-30	P06310	120 aa		4.63	□□□□□ -1.67
UBA3-208	ENST00000465627	MP68	P56378	58 aa		4.63	□□□□□ -1.67
UBA3-208	ENST00000465627	C1orf64	Q8NEQ6	169 aa		4.63	□□□□□ -1.67
UBA3-208	ENST00000465627	SNURF	Q9Y675	71 aa		4.63	□□□□□ -1.67
UBA3-208	ENST00000465627	CYP4F30P	Q9H0H9	118 aa		4.62	□□□□□ -1.67
UBA3-208	ENST00000465627	LOC101927531	A0A1B0GV80	90 aa		4.61	□□□□□ -1.67
UBA3-208	ENST00000465627		H7BZZ5	65 aa		4.61	□□□□□ -1.67
UBA3-208	ENST00000465627	ATP11AUN	Q6ZP68	121 aa		4.59	□□□□□ -1.67
UBA3-208	ENST00000465627	PCOTH	Q58A44	107 aa		4.58	□□□□□ -1.68
UBA3-208	ENST00000465627	NDUFC1	O43677	76 aa		4.57	□□□□□ -1.68
UBA3-208	ENST00000465627	SPINK7	P58062	85 aa		4.56	□□□□□ -1.68
UBA3-208	ENST00000465627	C7orf65	Q6ZTY9	151 aa		4.56	□□□□□ -1.68
UBA3-208	ENST00000465627	KRTAP4-1	Q9BYQ7	146 aa		4.55	□□□□□ -1.68
UBA3-208	ENST00000465627	IGKV2D-30	A0A075B6S6	120 aa		4.54	□□□□□ -1.68
UBA3-208	ENST00000465627	SEC61B	P60468	96 aa	Known RBP	4.54	□□□□□ -1.68
UBA3-208	ENST00000465627	MPLKIP	Q8TAP9	179 aa		4.53	□□□□□ -1.68
UBA3-208	ENST00000465627	HRES1	P13985	223 aa		4.53	□□□□□ -1.69
UBA3-208	ENST00000465627	KRTAP20-1	Q3LI63	56 aa		4.53	□□□□□ -1.69
UBA3-208	ENST00000465627	SPANXA2-OT1	Q8N9U9	137 aa		4.53	□□□□□ -1.69
UBA3-208	ENST00000465627	TMEM258	P61165	79 aa		4.5	□□□□□ -1.69
UBA3-208	ENST00000465627	KRTAP19-2	Q3LHN2	52 aa		4.49	□□□□□ -1.69
UBA3-208	ENST00000465627	C4orf26	Q17RF5	130 aa		4.47	□□□□□ -1.69
UBA3-208	ENST00000465627	DMAC1	Q96GE9	116 aa		4.46	□□□□□ -1.7
UBA3-208	ENST00000465627	FAM236D	A0A1B0GTK5	79 aa		4.45	□□□□□ -1.7
UBA3-208	ENST00000465627	FAM236C	P0DP71	79 aa		4.45	□□□□□ -1.7
UBA3-208	ENST00000465627	ATP5E	P56381	51 aa	Predicted RBP	4.45	□□□□□ -1.7
UBA3-208	ENST00000465627	COX6B2	Q6YFQ2	88 aa		4.45	□□□□□ -1.7
UBA3-208	ENST00000465627	GPR98	Q8WXG9	6306 aa		4.45	□□□□□ -1.7
UBA3-208	ENST00000465627	KRTAP6-3	Q3LI67	103 aa		4.42	□□□□□ -1.7
UBA3-208	ENST00000465627		A8MUN3	132 aa		4.41	□□□□□ -1.7
UBA3-208	ENST00000465627	FLG	P20930	4061 aa	Predicted RBP	4.41	□□□□□ -1.7
UBA3-208	ENST00000465627	KRTAP10-6	P60371	365 aa	Predicted RBP	4.4	□□□□□ -1.7
UBA3-208	ENST00000465627	ACYP2	P14621	99 aa		4.37	□□□□□ -1.71
UBA3-208	ENST00000465627	MT1H	P80294	61 aa		4.37	□□□□□ -1.71
UBA3-208	ENST00000465627	PRO0628	Q9UI54	55 aa		4.37	□□□□□ -1.71
UBA3-208	ENST00000465627	RPS28	P62857	69 aa	Known RBP	4.36	□□□□□ -1.71
UBA3-208	ENST00000465627	LCE1A	Q5T7P2	110 aa		4.36	□□□□□ -1.71
UBA3-208	ENST00000465627	COA5	Q86WW8	74 aa		4.36	□□□□□ -1.71
UBA3-208	ENST00000465627	RBM12B-AS1	Q9P1G2	102 aa		4.36	□□□□□ -1.71
UBA3-208	ENST00000465627	SERP1	Q9Y6X1	66 aa		4.36	□□□□□ -1.71
UBA3-208	ENST00000465627	MUC12	Q9UKN1	5478 aa		4.35	□□□□□ -1.71
UBA3-208	ENST00000465627	H1FX-AS1	Q4G0G2	97 aa		4.35	□□□□□ -1.71
UBA3-208	ENST00000465627	LCA10	Q71F78	164 aa		4.3	□□□□□ -1.72
UBA3-208	ENST00000465627	KRTAP10-7	P60409	375 aa	Predicted RBP	4.27	□□□□□ -1.73
UBA3-208	ENST00000465627		S4R3F8	94 aa		4.27	□□□□□ -1.73
UBA3-208	ENST00000465627	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.27	□□□□□ -1.73
UBA3-208	ENST00000465627	KMT2D	O14686	5537 aa		4.26	□□□□□ -1.73
UBA3-208	ENST00000465627	SMIM26	A0A096LP01	95 aa		4.23	□□□□□ -1.73
UBA3-208	ENST00000465627	CHKB-CPT1B	H3BT56	60 aa		4.23	□□□□□ -1.73
UBA3-208	ENST00000465627		Q1T7F1	81 aa		4.2	□□□□□ -1.74
UBA3-208	ENST00000465627	KRTAP5-11	Q6L8G4	156 aa		4.19	□□□□□ -1.74
UBA3-208	ENST00000465627	LINC01558	Q9Y6Z2	57 aa		4.19	□□□□□ -1.74
UBA3-208	ENST00000465627	PMAIP1	Q13794	54 aa		4.18	□□□□□ -1.74
UBA3-208	ENST00000465627	CSAG1	Q6PB30	78 aa		4.18	□□□□□ -1.74
UBA3-208	ENST00000465627	SPTSSB	Q8NFR3	76 aa		4.18	□□□□□ -1.74
UBA3-208	ENST00000465627		H0YAA0	97 aa		4.16	□□□□□ -1.74
UBA3-208	ENST00000465627		M0R2T5	61 aa		4.16	□□□□□ -1.74
UBA3-208	ENST00000465627	KRTAP2-3	P0C7H8	128 aa		4.15	□□□□□ -1.74
UBA3-208	ENST00000465627	KRTAP2-4	Q9BYR9	128 aa		4.15	□□□□□ -1.74
UBA3-208	ENST00000465627	MDN1	Q9NU22	5596 aa		4.13	□□□□□ -1.75
UBA3-208	ENST00000465627	KRTAP2-2	Q9BYT5	123 aa		4.13	□□□□□ -1.75
UBA3-208	ENST00000465627		P0C880	135 aa		4.1	□□□□□ -1.75
UBA3-208	ENST00000465627		Q5VV11	94 aa		4.1	□□□□□ -1.75
UBA3-208	ENST00000465627		A0A1B0GU69	56 aa		4.08	□□□□□ -1.76
UBA3-208	ENST00000465627	ADM2	Q7Z4H4	148 aa		4.08	□□□□□ -1.76
UBA3-208	ENST00000465627	PRR15L	Q9BU68	103 aa		4.08	□□□□□ -1.76
UBA3-208	ENST00000465627	PSPHP1	O15172	72 aa		4.06	□□□□□ -1.76
UBA3-208	ENST00000465627	MT2A	P02795	61 aa		4.06	□□□□□ -1.76
UBA3-208	ENST00000465627	KRTAP19-6	Q3LI70	58 aa		4.04	□□□□□ -1.76
UBA3-208	ENST00000465627	MT1F	P04733	61 aa		4.03	□□□□□ -1.76
UBA3-208	ENST00000465627	LCE1E	Q5T753	118 aa		4.02	□□□□□ -1.77
UBA3-208	ENST00000465627	KRTAP13-4	Q3LI77	160 aa		4.02	□□□□□ -1.77
UBA3-208	ENST00000465627		A0A1B0GU33	70 aa		4	□□□□□ -1.77
UBA3-208	ENST00000465627	CRIPT	Q9P021	101 aa		3.97	□□□□□ -1.77
UBA3-208	ENST00000465627		M0QZ58	72 aa		3.96	□□□□□ -1.78
UBA3-208	ENST00000465627	SPRR2G	Q9BYE4	73 aa		3.96	□□□□□ -1.78
UBA3-208	ENST00000465627	KRTAP2-1	Q9BYU5	128 aa		3.96	□□□□□ -1.78
UBA3-208	ENST00000465627	UQCR11	O14957	56 aa		3.95	□□□□□ -1.78
UBA3-208	ENST00000465627	SPATA8	Q6RVD6	105 aa		3.95	□□□□□ -1.78
UBA3-208	ENST00000465627	KRTAP10-10	P60014	251 aa		3.94	□□□□□ -1.78
UBA3-208	ENST00000465627		A6NED7	52 aa		3.92	□□□□□ -1.78
UBA3-208	ENST00000465627		A8MU10	97 aa		3.92	□□□□□ -1.78
UBA3-208	ENST00000465627	MIR22HG	Q0VDD5	57 aa		3.9	□□□□□ -1.78
UBA3-208	ENST00000465627		R4GN34	69 aa		3.9	□□□□□ -1.78
UBA3-208	ENST00000465627	KTN1-AS1	Q86SY8	53 aa		3.89	□□□□□ -1.79
UBA3-208	ENST00000465627	CDC42SE1	Q9NRR8	79 aa		3.89	□□□□□ -1.79
UBA3-208	ENST00000465627	KRTAP19-8	Q3LI54	63 aa		3.88	□□□□□ -1.79

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