RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 Q5VV11 94 aa8.67□□□□□ -1.02
EXOSC3-203ENST00000465229 PRR15LQ9BU68 103 aa8.66□□□□□ -1.02
EXOSC3-203ENST00000465229 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
EXOSC3-203ENST00000465229 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
EXOSC3-203ENST00000465229 KRTAP19-2Q3LHN2 52 aa8.59□□□□□ -1.03
EXOSC3-203ENST00000465229 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
EXOSC3-203ENST00000465229 PRO0628Q9UI54 55 aa8.56□□□□□ -1.04
EXOSC3-203ENST00000465229 FAT4Q6V0I7 4981 aa8.56□□□□□ -1.04
EXOSC3-203ENST00000465229 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
EXOSC3-203ENST00000465229 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
EXOSC3-203ENST00000465229 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
EXOSC3-203ENST00000465229 SVIPQ8NHG7 77 aa8.49□□□□□ -1.05
EXOSC3-203ENST00000465229 A0A1B0GU69 56 aa8.48□□□□□ -1.05
EXOSC3-203ENST00000465229 A6NED7 52 aa8.46□□□□□ -1.06
EXOSC3-203ENST00000465229 FLGP20930 4061 aaPredicted RBP8.45□□□□□ -1.06
EXOSC3-203ENST00000465229 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
EXOSC3-203ENST00000465229 SEC61GP60059 68 aa8.38□□□□□ -1.07
EXOSC3-203ENST00000465229 MT1HP80294 61 aa8.36□□□□□ -1.07
EXOSC3-203ENST00000465229 LCA10Q71F78 164 aa8.36□□□□□ -1.07
EXOSC3-203ENST00000465229 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
EXOSC3-203ENST00000465229 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
EXOSC3-203ENST00000465229 UQCR11O14957 56 aa8.3□□□□□ -1.08
EXOSC3-203ENST00000465229 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
EXOSC3-203ENST00000465229 S4R3F8 94 aa8.29□□□□□ -1.08
EXOSC3-203ENST00000465229 A8MU10 97 aa8.29□□□□□ -1.08
EXOSC3-203ENST00000465229 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
EXOSC3-203ENST00000465229 SPATA8Q6RVD6 105 aa8.26□□□□□ -1.09
EXOSC3-203ENST00000465229 M0R2T5 61 aa8.23□□□□□ -1.09
EXOSC3-203ENST00000465229 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.09
EXOSC3-203ENST00000465229 A0A1B0GU33 70 aa8.15□□□□□ -1.1
EXOSC3-203ENST00000465229 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
EXOSC3-203ENST00000465229 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
EXOSC3-203ENST00000465229 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
EXOSC3-203ENST00000465229 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
EXOSC3-203ENST00000465229 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
EXOSC3-203ENST00000465229 H0YAA0 97 aa8.07□□□□□ -1.12
EXOSC3-203ENST00000465229 A6NN06 94 aa8.05□□□□□ -1.12
EXOSC3-203ENST00000465229 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
EXOSC3-203ENST00000465229 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
EXOSC3-203ENST00000465229 MT2AP02795 61 aa7.94□□□□□ -1.14
EXOSC3-203ENST00000465229 P0C880 135 aa7.94□□□□□ -1.14
EXOSC3-203ENST00000465229 MT1FP04733 61 aa7.89□□□□□ -1.15
EXOSC3-203ENST00000465229 KTN1-AS1Q86SY8 53 aa7.89□□□□□ -1.15
EXOSC3-203ENST00000465229 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
EXOSC3-203ENST00000465229 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
EXOSC3-203ENST00000465229 M0QZ58 72 aa7.83□□□□□ -1.16
EXOSC3-203ENST00000465229 K7ERS5 55 aa7.81□□□□□ -1.16
EXOSC3-203ENST00000465229 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
EXOSC3-203ENST00000465229 A0A0D9SG42 100 aa7.71□□□□□ -1.17
EXOSC3-203ENST00000465229 R4GN34 69 aa7.66□□□□□ -1.18
EXOSC3-203ENST00000465229 CRIPTQ9P021 101 aa7.63□□□□□ -1.19
EXOSC3-203ENST00000465229 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
EXOSC3-203ENST00000465229 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
EXOSC3-203ENST00000465229 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
EXOSC3-203ENST00000465229 LCE2BO14633 110 aa7.59□□□□□ -1.19
EXOSC3-203ENST00000465229 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.19
EXOSC3-203ENST00000465229 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
EXOSC3-203ENST00000465229 ROMO1P60602 79 aa7.53□□□□□ -1.2
EXOSC3-203ENST00000465229 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.2
EXOSC3-203ENST00000465229 PRAC1Q96KF2 57 aa7.52□□□□□ -1.2
EXOSC3-203ENST00000465229 USH2AO75445 5202 aa7.48□□□□□ -1.21
EXOSC3-203ENST00000465229 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
EXOSC3-203ENST00000465229 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
EXOSC3-203ENST00000465229 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
EXOSC3-203ENST00000465229 MT1BP07438 61 aa7.38□□□□□ -1.23
EXOSC3-203ENST00000465229 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
EXOSC3-203ENST00000465229 SSPOA2VEC9 5147 aa7.31□□□□□ -1.24
EXOSC3-203ENST00000465229 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
EXOSC3-203ENST00000465229 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
EXOSC3-203ENST00000465229 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
EXOSC3-203ENST00000465229 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
EXOSC3-203ENST00000465229 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
EXOSC3-203ENST00000465229 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.27
EXOSC3-203ENST00000465229 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
EXOSC3-203ENST00000465229 KRTAP10-5P60370 271 aa7.09□□□□□ -1.28
EXOSC3-203ENST00000465229 MT1XP80297 61 aa7.06□□□□□ -1.28
EXOSC3-203ENST00000465229 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
EXOSC3-203ENST00000465229 TNP1P09430 55 aa6.93□□□□□ -1.3
EXOSC3-203ENST00000465229 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
EXOSC3-203ENST00000465229 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
EXOSC3-203ENST00000465229 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-203ENST00000465229 MACF1Q9UPN3 7388 aaKnown RBP6.75□□□□□ -1.33
EXOSC3-203ENST00000465229 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
EXOSC3-203ENST00000465229 KRTAP10-12P60413 245 aa6.7□□□□□ -1.34
EXOSC3-203ENST00000465229 KMT2DO14686 5537 aa6.65□□□□□ -1.34
EXOSC3-203ENST00000465229 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
EXOSC3-203ENST00000465229 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
EXOSC3-203ENST00000465229 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
EXOSC3-203ENST00000465229 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
EXOSC3-203ENST00000465229 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
EXOSC3-203ENST00000465229 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
EXOSC3-203ENST00000465229 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
EXOSC3-203ENST00000465229 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
EXOSC3-203ENST00000465229 KRTAP9-7A8MTY7 169 aa6.49□□□□□ -1.37
EXOSC3-203ENST00000465229 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
EXOSC3-203ENST00000465229 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
EXOSC3-203ENST00000465229 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
EXOSC3-203ENST00000465229 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
EXOSC3-203ENST00000465229 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
EXOSC3-203ENST00000465229 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms