RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 PCP4P48539 62 aa7.18□□□□□ -1.26
HOXB3-204ENST00000465120 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
HOXB3-204ENST00000465120 COX7CP15954 63 aa7.16□□□□□ -1.26
HOXB3-204ENST00000465120 C5orf47Q569G3 176 aa7.15□□□□□ -1.26
HOXB3-204ENST00000465120 MP68P56378 58 aa7.12□□□□□ -1.27
HOXB3-204ENST00000465120 H3BPC8 53 aa7.1□□□□□ -1.27
HOXB3-204ENST00000465120 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
HOXB3-204ENST00000465120 S4R3F8 94 aa7.08□□□□□ -1.28
HOXB3-204ENST00000465120 KRTAP6-3Q3LI67 103 aa7.07□□□□□ -1.28
HOXB3-204ENST00000465120 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
HOXB3-204ENST00000465120 H0Y9P7 68 aa7.05□□□□□ -1.28
HOXB3-204ENST00000465120 CSAG1Q6PB30 78 aa7.05□□□□□ -1.28
HOXB3-204ENST00000465120 C20orf197Q8N268 126 aa7.04□□□□□ -1.28
HOXB3-204ENST00000465120 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
HOXB3-204ENST00000465120 CCDC179H3BU77 68 aa7.02□□□□□ -1.29
HOXB3-204ENST00000465120 NDUFC1O43677 76 aa7.02□□□□□ -1.29
HOXB3-204ENST00000465120 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
HOXB3-204ENST00000465120 LCA10Q71F78 164 aa7.01□□□□□ -1.29
HOXB3-204ENST00000465120 A6NN06 94 aa7□□□□□ -1.29
HOXB3-204ENST00000465120 LINC00208Q96KT6 92 aa7□□□□□ -1.29
HOXB3-204ENST00000465120 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
HOXB3-204ENST00000465120 Q5VV11 94 aa6.99□□□□□ -1.29
HOXB3-204ENST00000465120 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
HOXB3-204ENST00000465120 MT1BP07438 61 aa6.94□□□□□ -1.3
HOXB3-204ENST00000465120 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
HOXB3-204ENST00000465120 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
HOXB3-204ENST00000465120 CYP4F30PQ9H0H9 118 aa6.89□□□□□ -1.31
HOXB3-204ENST00000465120 H7BZZ5 65 aa6.87□□□□□ -1.31
HOXB3-204ENST00000465120 TMEM258P61165 79 aa6.87□□□□□ -1.31
HOXB3-204ENST00000465120 ATP5EP56381 51 aaPredicted RBP6.85□□□□□ -1.31
HOXB3-204ENST00000465120 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
HOXB3-204ENST00000465120 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
HOXB3-204ENST00000465120 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
HOXB3-204ENST00000465120 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
HOXB3-204ENST00000465120 NEBP20929 6669 aa6.79□□□□□ -1.32
HOXB3-204ENST00000465120 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
HOXB3-204ENST00000465120 A8MUN3 132 aa6.71□□□□□ -1.34
HOXB3-204ENST00000465120 ACYP2P14621 99 aa6.69□□□□□ -1.34
HOXB3-204ENST00000465120 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
HOXB3-204ENST00000465120 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
HOXB3-204ENST00000465120 H0YAA0 97 aa6.65□□□□□ -1.34
HOXB3-204ENST00000465120 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
HOXB3-204ENST00000465120 KRTAP5-9P26371 169 aa6.64□□□□□ -1.35
HOXB3-204ENST00000465120 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
HOXB3-204ENST00000465120 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
HOXB3-204ENST00000465120 KMT2DO14686 5537 aa6.6□□□□□ -1.35
HOXB3-204ENST00000465120 MDN1Q9NU22 5596 aa6.59□□□□□ -1.36
HOXB3-204ENST00000465120 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
HOXB3-204ENST00000465120 COA5Q86WW8 74 aa6.57□□□□□ -1.36
HOXB3-204ENST00000465120 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
HOXB3-204ENST00000465120 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
HOXB3-204ENST00000465120 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
HOXB3-204ENST00000465120 R4GN34 69 aa6.51□□□□□ -1.37
HOXB3-204ENST00000465120 SMIM26A0A096LP01 95 aa6.49□□□□□ -1.37
HOXB3-204ENST00000465120 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
HOXB3-204ENST00000465120 MT1XP80297 61 aa6.47□□□□□ -1.37
HOXB3-204ENST00000465120 M0QZ58 72 aa6.44□□□□□ -1.38
HOXB3-204ENST00000465120 P0C880 135 aa6.44□□□□□ -1.38
HOXB3-204ENST00000465120 SPRR2EP22531 72 aa6.44□□□□□ -1.38
HOXB3-204ENST00000465120 SPRR2BP35325 72 aa6.44□□□□□ -1.38
HOXB3-204ENST00000465120 SPRR2AP35326 72 aa6.44□□□□□ -1.38
HOXB3-204ENST00000465120 V9GYY9 64 aa6.44□□□□□ -1.38
HOXB3-204ENST00000465120 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
HOXB3-204ENST00000465120 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
HOXB3-204ENST00000465120 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
HOXB3-204ENST00000465120 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
HOXB3-204ENST00000465120 Q1T7F1 81 aa6.35□□□□□ -1.39
HOXB3-204ENST00000465120 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
HOXB3-204ENST00000465120 SEC61GP60059 68 aa6.34□□□□□ -1.39
HOXB3-204ENST00000465120 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
HOXB3-204ENST00000465120 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
HOXB3-204ENST00000465120 A0A1B0GU69 56 aa6.28□□□□□ -1.4
HOXB3-204ENST00000465120 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
HOXB3-204ENST00000465120 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
HOXB3-204ENST00000465120 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
HOXB3-204ENST00000465120 SPRR2DP22532 72 aa6.23□□□□□ -1.41
HOXB3-204ENST00000465120 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
HOXB3-204ENST00000465120 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
HOXB3-204ENST00000465120 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
HOXB3-204ENST00000465120 PSPHP1O15172 72 aa6.19□□□□□ -1.42
HOXB3-204ENST00000465120 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
HOXB3-204ENST00000465120 A0A1B0GU33 70 aa6.09□□□□□ -1.43
HOXB3-204ENST00000465120 UQCR11O14957 56 aa6.09□□□□□ -1.43
HOXB3-204ENST00000465120 A6NED7 52 aa6.07□□□□□ -1.44
HOXB3-204ENST00000465120 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
HOXB3-204ENST00000465120 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
HOXB3-204ENST00000465120 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
HOXB3-204ENST00000465120 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
HOXB3-204ENST00000465120 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
HOXB3-204ENST00000465120 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
HOXB3-204ENST00000465120 H3BS24 57 aa5.92□□□□□ -1.46
HOXB3-204ENST00000465120 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
HOXB3-204ENST00000465120 K7ERS5 55 aa5.85□□□□□ -1.47
HOXB3-204ENST00000465120 A0A0D9SG42 100 aa5.82□□□□□ -1.48
HOXB3-204ENST00000465120 A8MU10 97 aa5.79□□□□□ -1.48
HOXB3-204ENST00000465120 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
HOXB3-204ENST00000465120 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
HOXB3-204ENST00000465120 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
HOXB3-204ENST00000465120 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
HOXB3-204ENST00000465120 MT1EP04732 61 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms