RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
XRN1-204ENST00000465074 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
XRN1-204ENST00000465074 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
XRN1-204ENST00000465074 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
XRN1-204ENST00000465074 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
XRN1-204ENST00000465074 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
XRN1-204ENST00000465074 ATP5EP2Q5VTU8 51 aa5.67□□□□□ -1.5
XRN1-204ENST00000465074 A0A1B0GV90 55 aa5.66□□□□□ -1.5
XRN1-204ENST00000465074 CSAG1Q6PB30 78 aa5.66□□□□□ -1.5
XRN1-204ENST00000465074 LCA10Q71F78 164 aa5.66□□□□□ -1.5
XRN1-204ENST00000465074 A0A087WVE0 104 aa5.63□□□□□ -1.51
XRN1-204ENST00000465074 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
XRN1-204ENST00000465074 H0Y9P7 68 aa5.63□□□□□ -1.51
XRN1-204ENST00000465074 UQCRQO14949 82 aa5.62□□□□□ -1.51
XRN1-204ENST00000465074 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
XRN1-204ENST00000465074 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
XRN1-204ENST00000465074 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
XRN1-204ENST00000465074 ATOX1O00244 68 aa5.58□□□□□ -1.52
XRN1-204ENST00000465074 PCP4P48539 62 aa5.55□□□□□ -1.52
XRN1-204ENST00000465074 LINC00208Q96KT6 92 aa5.55□□□□□ -1.52
XRN1-204ENST00000465074 J3QR89 54 aa5.51□□□□□ -1.53
XRN1-204ENST00000465074 MP68P56378 58 aa5.51□□□□□ -1.53
XRN1-204ENST00000465074 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
XRN1-204ENST00000465074 NDUFC1O43677 76 aa5.49□□□□□ -1.53
XRN1-204ENST00000465074 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
XRN1-204ENST00000465074 Q5VV11 94 aa5.48□□□□□ -1.53
XRN1-204ENST00000465074 OCR1Q9BZK8 76 aa5.48□□□□□ -1.53
XRN1-204ENST00000465074 SCGB1A1P11684 91 aa5.47□□□□□ -1.53
XRN1-204ENST00000465074 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
XRN1-204ENST00000465074 IMUPQ9GZP8 106 aa5.45□□□□□ -1.54
XRN1-204ENST00000465074 A8MUN3 132 aa5.43□□□□□ -1.54
XRN1-204ENST00000465074 MT1BP07438 61 aa5.43□□□□□ -1.54
XRN1-204ENST00000465074 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
XRN1-204ENST00000465074 A6NN06 94 aa5.42□□□□□ -1.54
XRN1-204ENST00000465074 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
XRN1-204ENST00000465074 SYNE2Q8WXH0 6885 aaKnown RBP5.4□□□□□ -1.54
XRN1-204ENST00000465074 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.54
XRN1-204ENST00000465074 CRIPTQ9P021 101 aa5.39□□□□□ -1.55
XRN1-204ENST00000465074 H3BPC8 53 aa5.37□□□□□ -1.55
XRN1-204ENST00000465074 H0YAA0 97 aa5.34□□□□□ -1.55
XRN1-204ENST00000465074 MT-ATP8P03928 68 aa5.32□□□□□ -1.56
XRN1-204ENST00000465074 K7ERU9 68 aa5.31□□□□□ -1.56
XRN1-204ENST00000465074 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
XRN1-204ENST00000465074 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
XRN1-204ENST00000465074 DMAC1Q96GE9 116 aa5.3□□□□□ -1.56
XRN1-204ENST00000465074 TRAV7A0A075B6U4 112 aa5.26□□□□□ -1.57
XRN1-204ENST00000465074 P0C880 135 aa5.25□□□□□ -1.57
XRN1-204ENST00000465074 R4GN34 69 aa5.25□□□□□ -1.57
XRN1-204ENST00000465074 C20orf197Q8N268 126 aa5.24□□□□□ -1.57
XRN1-204ENST00000465074 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
XRN1-204ENST00000465074 M0QZ58 72 aa5.22□□□□□ -1.57
XRN1-204ENST00000465074 ACYP2P14621 99 aa5.22□□□□□ -1.57
XRN1-204ENST00000465074 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
XRN1-204ENST00000465074 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
XRN1-204ENST00000465074 SNURFQ9Y675 71 aa5.2□□□□□ -1.58
XRN1-204ENST00000465074 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
XRN1-204ENST00000465074 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
XRN1-204ENST00000465074 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
XRN1-204ENST00000465074 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.59
XRN1-204ENST00000465074 MT1XP80297 61 aa5.11□□□□□ -1.59
XRN1-204ENST00000465074 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
XRN1-204ENST00000465074 NEBP20929 6669 aa5.04□□□□□ -1.6
XRN1-204ENST00000465074 SPANXA2-OT1Q8N9U9 137 aa5.04□□□□□ -1.6
XRN1-204ENST00000465074 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
XRN1-204ENST00000465074 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
XRN1-204ENST00000465074 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
XRN1-204ENST00000465074 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
XRN1-204ENST00000465074 COA5Q86WW8 74 aa4.96□□□□□ -1.62
XRN1-204ENST00000465074 KMT2DO14686 5537 aa4.95□□□□□ -1.62
XRN1-204ENST00000465074 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
XRN1-204ENST00000465074 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
XRN1-204ENST00000465074 COX7CP15954 63 aa4.93□□□□□ -1.62
XRN1-204ENST00000465074 SPRR2EP22531 72 aa4.91□□□□□ -1.62
XRN1-204ENST00000465074 SPRR2BP35325 72 aa4.91□□□□□ -1.62
XRN1-204ENST00000465074 SPRR2AP35326 72 aa4.91□□□□□ -1.62
XRN1-204ENST00000465074 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
XRN1-204ENST00000465074 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
XRN1-204ENST00000465074 SEC61GP60059 68 aa4.89□□□□□ -1.63
XRN1-204ENST00000465074 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
XRN1-204ENST00000465074 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
XRN1-204ENST00000465074 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
XRN1-204ENST00000465074 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
XRN1-204ENST00000465074 A0A0D9SG42 100 aa4.84□□□□□ -1.63
XRN1-204ENST00000465074 H7BZZ5 65 aa4.83□□□□□ -1.64
XRN1-204ENST00000465074 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
XRN1-204ENST00000465074 ANAPC13Q9BS18 74 aa4.81□□□□□ -1.64
XRN1-204ENST00000465074 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
XRN1-204ENST00000465074 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
XRN1-204ENST00000465074 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
XRN1-204ENST00000465074 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
XRN1-204ENST00000465074 A0A1B0GU33 70 aa4.78□□□□□ -1.64
XRN1-204ENST00000465074 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
XRN1-204ENST00000465074 SPRR2DP22532 72 aa4.75□□□□□ -1.65
XRN1-204ENST00000465074 A0A1B0GU69 56 aa4.72□□□□□ -1.65
XRN1-204ENST00000465074 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
XRN1-204ENST00000465074 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
XRN1-204ENST00000465074 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
XRN1-204ENST00000465074 SMIM26A0A096LP01 95 aa4.64□□□□□ -1.67
XRN1-204ENST00000465074 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
XRN1-204ENST00000465074 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms