RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 FLG2Q5D862 2391 aaPredicted RBP2.01□□□□□ -2.09
SCN3A-206ENST00000465043 LINC00313P59037 77 aa2□□□□□ -2.09
SCN3A-206ENST00000465043 SMIM20Q8N5G0 67 aa2□□□□□ -2.09
SCN3A-206ENST00000465043 MRPL34Q9BQ48 92 aaKnown RBP2□□□□□ -2.09
SCN3A-206ENST00000465043 LRP1Q07954 4544 aaKnown RBP1.99□□□□□ -2.09
SCN3A-206ENST00000465043 TNXBP22105 4242 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 C9orf92A6NGG3 77 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 C8orf87E5RJ46 101 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 MT1HL1P0DM35 61 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 TMEM254Q8TBM7 123 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 FAT3Q8TDW7 4589 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 HERC1Q15751 4861 aa1.99□□□□□ -2.09
SCN3A-206ENST00000465043 A0A0U1RQV1 116 aa1.98□□□□□ -2.09
SCN3A-206ENST00000465043 H0Y9P7 68 aa1.98□□□□□ -2.09
SCN3A-206ENST00000465043 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
SCN3A-206ENST00000465043 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
SCN3A-206ENST00000465043 C5orf47Q569G3 176 aa1.97□□□□□ -2.09
SCN3A-206ENST00000465043 Q5W150 140 aa1.97□□□□□ -2.09
SCN3A-206ENST00000465043 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
SCN3A-206ENST00000465043 DMBT1Q9UGM3 2413 aaPredicted RBP1.96□□□□□ -2.1
SCN3A-206ENST00000465043 MP68P56378 58 aa1.96□□□□□ -2.1
SCN3A-206ENST00000465043 C1orf64Q8NEQ6 169 aa1.96□□□□□ -2.1
SCN3A-206ENST00000465043 TRAV22A0A0B4J277 110 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 H7BZZ5 65 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 OXTP01178 125 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 KLKP1Q107X0 134 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 PRR4Q16378 134 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 ZCCHC13Q8WW36 166 aaKnown RBP1.95□□□□□ -2.1
SCN3A-206ENST00000465043 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
SCN3A-206ENST00000465043 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
SCN3A-206ENST00000465043 FAM236DA0A1B0GTK5 79 aa1.93□□□□□ -2.1
SCN3A-206ENST00000465043 FAM236CP0DP71 79 aa1.93□□□□□ -2.1
SCN3A-206ENST00000465043 TMEM258P61165 79 aa1.93□□□□□ -2.1
SCN3A-206ENST00000465043 A8MUU9 505 aa1.92□□□□□ -2.1
SCN3A-206ENST00000465043 H3BPC8 53 aa1.92□□□□□ -2.1
SCN3A-206ENST00000465043 NDUFC1O43677 76 aa1.92□□□□□ -2.1
SCN3A-206ENST00000465043 FP248Q71RG6 208 aaPredicted RBP1.92□□□□□ -2.1
SCN3A-206ENST00000465043 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
SCN3A-206ENST00000465043 LOC101927531A0A1B0GV80 90 aa1.91□□□□□ -2.1
SCN3A-206ENST00000465043 CYP4F30PQ9H0H9 118 aa1.91□□□□□ -2.1
SCN3A-206ENST00000465043 HRES1P13985 223 aa1.9□□□□□ -2.11
SCN3A-206ENST00000465043 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
SCN3A-206ENST00000465043 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
SCN3A-206ENST00000465043 SPINK7P58062 85 aa1.88□□□□□ -2.11
SCN3A-206ENST00000465043 ATP11AUNQ6ZP68 121 aa1.88□□□□□ -2.11
SCN3A-206ENST00000465043 C7orf65Q6ZTY9 151 aa1.88□□□□□ -2.11
SCN3A-206ENST00000465043 SPANXA2-OT1Q8N9U9 137 aa1.88□□□□□ -2.11
SCN3A-206ENST00000465043 SERP1Q9Y6X1 66 aa1.88□□□□□ -2.11
SCN3A-206ENST00000465043 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
SCN3A-206ENST00000465043 RPS28P62857 69 aaKnown RBP1.87□□□□□ -2.11
SCN3A-206ENST00000465043 C4orf26Q17RF5 130 aa1.87□□□□□ -2.11
SCN3A-206ENST00000465043 TPRXLQ17RH7 258 aa1.87□□□□□ -2.11
SCN3A-206ENST00000465043 LPAP08519 4548 aa1.87□□□□□ -2.11
SCN3A-206ENST00000465043 MUC2Q02817 5179 aa1.87□□□□□ -2.11
SCN3A-206ENST00000465043 COA5Q86WW8 74 aa1.86□□□□□ -2.11
SCN3A-206ENST00000465043 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
SCN3A-206ENST00000465043 ACYP2P14621 99 aa1.84□□□□□ -2.11
SCN3A-206ENST00000465043 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
SCN3A-206ENST00000465043 LRP2P98164 4655 aa1.84□□□□□ -2.12
SCN3A-206ENST00000465043 SMIM26A0A096LP01 95 aa1.83□□□□□ -2.12
SCN3A-206ENST00000465043 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
SCN3A-206ENST00000465043 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
SCN3A-206ENST00000465043 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
SCN3A-206ENST00000465043 HMCN2Q8NDA2 5059 aa1.82□□□□□ -2.12
SCN3A-206ENST00000465043 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
SCN3A-206ENST00000465043 MUC17Q685J3 4493 aa1.8□□□□□ -2.12
SCN3A-206ENST00000465043 A8MUN3 132 aa1.8□□□□□ -2.12
SCN3A-206ENST00000465043 PSPHP1O15172 72 aa1.8□□□□□ -2.12
SCN3A-206ENST00000465043 Q1T7F1 81 aa1.79□□□□□ -2.12
SCN3A-206ENST00000465043 PRR15LQ9BU68 103 aa1.79□□□□□ -2.12
SCN3A-206ENST00000465043 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
SCN3A-206ENST00000465043 H1FX-AS1Q4G0G2 97 aa1.78□□□□□ -2.12
SCN3A-206ENST00000465043 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
SCN3A-206ENST00000465043 RBM12B-AS1Q9P1G2 102 aa1.78□□□□□ -2.12
SCN3A-206ENST00000465043 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.13
SCN3A-206ENST00000465043 LCA10Q71F78 164 aa1.77□□□□□ -2.13
SCN3A-206ENST00000465043 LINC01558Q9Y6Z2 57 aa1.77□□□□□ -2.13
SCN3A-206ENST00000465043 S4R3F8 94 aa1.77□□□□□ -2.13
SCN3A-206ENST00000465043 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
SCN3A-206ENST00000465043 Q5VV11 94 aa1.76□□□□□ -2.13
SCN3A-206ENST00000465043 V9GYY9 64 aa1.76□□□□□ -2.13
SCN3A-206ENST00000465043 A0A1B0GU69 56 aa1.75□□□□□ -2.13
SCN3A-206ENST00000465043 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
SCN3A-206ENST00000465043 SPTSSBQ8NFR3 76 aa1.75□□□□□ -2.13
SCN3A-206ENST00000465043 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
SCN3A-206ENST00000465043 A6NED7 52 aa1.73□□□□□ -2.13
SCN3A-206ENST00000465043 SEC61GP60059 68 aa1.73□□□□□ -2.13
SCN3A-206ENST00000465043 CSAG1Q6PB30 78 aa1.72□□□□□ -2.13
SCN3A-206ENST00000465043 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
SCN3A-206ENST00000465043 P0C880 135 aa1.71□□□□□ -2.14
SCN3A-206ENST00000465043 ADM2Q7Z4H4 148 aa1.71□□□□□ -2.14
SCN3A-206ENST00000465043 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
SCN3A-206ENST00000465043 A0A1B0GU33 70 aa1.7□□□□□ -2.14
SCN3A-206ENST00000465043 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
SCN3A-206ENST00000465043 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
SCN3A-206ENST00000465043 H0YAA0 97 aa1.68□□□□□ -2.14
SCN3A-206ENST00000465043 M0R2T5 61 aa1.68□□□□□ -2.14
SCN3A-206ENST00000465043 UQCR11O14957 56 aa1.68□□□□□ -2.14
SCN3A-206ENST00000465043 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms