RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
MRPL55-224ENST00000464148 NEBP20929 6669 aa6.34□□□□□ -1.39
MRPL55-224ENST00000464148 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
MRPL55-224ENST00000464148 MP68P56378 58 aa6.34□□□□□ -1.39
MRPL55-224ENST00000464148 SPINK7P58062 85 aa6.34□□□□□ -1.39
MRPL55-224ENST00000464148 H0Y9P7 68 aa6.33□□□□□ -1.4
MRPL55-224ENST00000464148 ZCCHC13Q8WW36 166 aaKnown RBP6.32□□□□□ -1.4
MRPL55-224ENST00000464148 Q5W150 140 aa6.3□□□□□ -1.4
MRPL55-224ENST00000464148 NDUFC1O43677 76 aa6.29□□□□□ -1.4
MRPL55-224ENST00000464148 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
MRPL55-224ENST00000464148 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
MRPL55-224ENST00000464148 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
MRPL55-224ENST00000464148 C1orf64Q8NEQ6 169 aa6.27□□□□□ -1.41
MRPL55-224ENST00000464148 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
MRPL55-224ENST00000464148 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
MRPL55-224ENST00000464148 H7BZZ5 65 aa6.25□□□□□ -1.41
MRPL55-224ENST00000464148 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
MRPL55-224ENST00000464148 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
MRPL55-224ENST00000464148 TMEM258P61165 79 aa6.21□□□□□ -1.42
MRPL55-224ENST00000464148 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
MRPL55-224ENST00000464148 A6NN06 94 aa6.18□□□□□ -1.42
MRPL55-224ENST00000464148 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
MRPL55-224ENST00000464148 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
MRPL55-224ENST00000464148 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
MRPL55-224ENST00000464148 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
MRPL55-224ENST00000464148 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
MRPL55-224ENST00000464148 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
MRPL55-224ENST00000464148 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
MRPL55-224ENST00000464148 Q5VV11 94 aa6.06□□□□□ -1.44
MRPL55-224ENST00000464148 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
MRPL55-224ENST00000464148 MT1BP07438 61 aa6.04□□□□□ -1.44
MRPL55-224ENST00000464148 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
MRPL55-224ENST00000464148 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
MRPL55-224ENST00000464148 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
MRPL55-224ENST00000464148 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
MRPL55-224ENST00000464148 KMT2DO14686 5537 aa6.01□□□□□ -1.45
MRPL55-224ENST00000464148 KRTAP10-5P60370 271 aa6□□□□□ -1.45
MRPL55-224ENST00000464148 A8MUN3 132 aa5.99□□□□□ -1.45
MRPL55-224ENST00000464148 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
MRPL55-224ENST00000464148 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
MRPL55-224ENST00000464148 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
MRPL55-224ENST00000464148 ACYP2P14621 99 aa5.96□□□□□ -1.46
MRPL55-224ENST00000464148 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
MRPL55-224ENST00000464148 H3BS24 57 aa5.94□□□□□ -1.46
MRPL55-224ENST00000464148 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
MRPL55-224ENST00000464148 COA5Q86WW8 74 aa5.93□□□□□ -1.46
MRPL55-224ENST00000464148 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
MRPL55-224ENST00000464148 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
MRPL55-224ENST00000464148 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
MRPL55-224ENST00000464148 S4R3F8 94 aa5.85□□□□□ -1.47
MRPL55-224ENST00000464148 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
MRPL55-224ENST00000464148 SPRR2EP22531 72 aa5.84□□□□□ -1.47
MRPL55-224ENST00000464148 SPRR2BP35325 72 aa5.84□□□□□ -1.47
MRPL55-224ENST00000464148 SPRR2AP35326 72 aa5.84□□□□□ -1.47
MRPL55-224ENST00000464148 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
MRPL55-224ENST00000464148 LCA10Q71F78 164 aa5.79□□□□□ -1.48
MRPL55-224ENST00000464148 SPTSSBQ8NFR3 76 aa5.77□□□□□ -1.49
MRPL55-224ENST00000464148 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
MRPL55-224ENST00000464148 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
MRPL55-224ENST00000464148 Q1T7F1 81 aa5.76□□□□□ -1.49
MRPL55-224ENST00000464148 V9GYY9 64 aa5.75□□□□□ -1.49
MRPL55-224ENST00000464148 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
MRPL55-224ENST00000464148 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
MRPL55-224ENST00000464148 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
MRPL55-224ENST00000464148 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
MRPL55-224ENST00000464148 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
MRPL55-224ENST00000464148 SPRR2DP22532 72 aa5.65□□□□□ -1.5
MRPL55-224ENST00000464148 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
MRPL55-224ENST00000464148 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
MRPL55-224ENST00000464148 A0A1B0GU69 56 aa5.6□□□□□ -1.51
MRPL55-224ENST00000464148 PSPHP1O15172 72 aa5.59□□□□□ -1.51
MRPL55-224ENST00000464148 SEC61GP60059 68 aa5.58□□□□□ -1.52
MRPL55-224ENST00000464148 MT1XP80297 61 aa5.57□□□□□ -1.52
MRPL55-224ENST00000464148 H0YAA0 97 aa5.56□□□□□ -1.52
MRPL55-224ENST00000464148 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
MRPL55-224ENST00000464148 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
MRPL55-224ENST00000464148 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
MRPL55-224ENST00000464148 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
MRPL55-224ENST00000464148 GPR98Q8WXG9 6306 aa5.48□□□□□ -1.53
MRPL55-224ENST00000464148 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
MRPL55-224ENST00000464148 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
MRPL55-224ENST00000464148 A0A1B0GU33 70 aa5.45□□□□□ -1.54
MRPL55-224ENST00000464148 UQCR11O14957 56 aa5.45□□□□□ -1.54
MRPL55-224ENST00000464148 P0C880 135 aa5.45□□□□□ -1.54
MRPL55-224ENST00000464148 A6NED7 52 aa5.43□□□□□ -1.54
MRPL55-224ENST00000464148 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
MRPL55-224ENST00000464148 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
MRPL55-224ENST00000464148 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
MRPL55-224ENST00000464148 M0QZ58 72 aa5.36□□□□□ -1.55
MRPL55-224ENST00000464148 R4GN34 69 aa5.36□□□□□ -1.55
MRPL55-224ENST00000464148 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
MRPL55-224ENST00000464148 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
MRPL55-224ENST00000464148 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
MRPL55-224ENST00000464148 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
MRPL55-224ENST00000464148 A8MU10 97 aa5.28□□□□□ -1.56
MRPL55-224ENST00000464148 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
MRPL55-224ENST00000464148 LINC01554Q52M75 96 aa5.26□□□□□ -1.57
MRPL55-224ENST00000464148 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
MRPL55-224ENST00000464148 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
MRPL55-224ENST00000464148 A0A0D9SG42 100 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms