RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 LRP2P98164 4655 aa4.49□□□□□ -1.69
NCBP2-209ENST00000463783 FLG2Q5D862 2391 aaPredicted RBP4.49□□□□□ -1.69
NCBP2-209ENST00000463783 MUC2Q02817 5179 aa4.48□□□□□ -1.69
NCBP2-209ENST00000463783 MT1HL1P0DM35 61 aa4.46□□□□□ -1.69
NCBP2-209ENST00000463783 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
NCBP2-209ENST00000463783 UBR4Q5T4S7 5183 aa4.46□□□□□ -1.7
NCBP2-209ENST00000463783 H0YAA0 97 aa4.45□□□□□ -1.7
NCBP2-209ENST00000463783 LINC00304Q8N9R0 145 aa4.45□□□□□ -1.7
NCBP2-209ENST00000463783 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
NCBP2-209ENST00000463783 A8MUU9 505 aa4.41□□□□□ -1.7
NCBP2-209ENST00000463783 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
NCBP2-209ENST00000463783 C4orf48Q5BLP8 95 aa4.4□□□□□ -1.7
NCBP2-209ENST00000463783 UQCR11O14957 56 aa4.4□□□□□ -1.7
NCBP2-209ENST00000463783 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
NCBP2-209ENST00000463783 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
NCBP2-209ENST00000463783 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
NCBP2-209ENST00000463783 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
NCBP2-209ENST00000463783 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
NCBP2-209ENST00000463783 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
NCBP2-209ENST00000463783 DMBT1Q9UGM3 2413 aaPredicted RBP4.31□□□□□ -1.72
NCBP2-209ENST00000463783 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
NCBP2-209ENST00000463783 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
NCBP2-209ENST00000463783 H1FX-AS1Q4G0G2 97 aa4.28□□□□□ -1.72
NCBP2-209ENST00000463783 Q5VSD8 79 aa4.28□□□□□ -1.72
NCBP2-209ENST00000463783 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
NCBP2-209ENST00000463783 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.73
NCBP2-209ENST00000463783 A0A1B0GU33 70 aa4.27□□□□□ -1.73
NCBP2-209ENST00000463783 LINC01554Q52M75 96 aa4.27□□□□□ -1.73
NCBP2-209ENST00000463783 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
NCBP2-209ENST00000463783 XP32Q5T750 250 aa4.22□□□□□ -1.73
NCBP2-209ENST00000463783 P0C880 135 aa4.21□□□□□ -1.74
NCBP2-209ENST00000463783 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
NCBP2-209ENST00000463783 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
NCBP2-209ENST00000463783 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
NCBP2-209ENST00000463783 A0A0D9SG42 100 aa4.16□□□□□ -1.74
NCBP2-209ENST00000463783 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
NCBP2-209ENST00000463783 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
NCBP2-209ENST00000463783 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
NCBP2-209ENST00000463783 S4R3F8 94 aa4.09□□□□□ -1.75
NCBP2-209ENST00000463783 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.76
NCBP2-209ENST00000463783 ROMO1P60602 79 aa4.06□□□□□ -1.76
NCBP2-209ENST00000463783 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
NCBP2-209ENST00000463783 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
NCBP2-209ENST00000463783 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
NCBP2-209ENST00000463783 H3BS24 57 aa3.99□□□□□ -1.77
NCBP2-209ENST00000463783 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
NCBP2-209ENST00000463783 K7ERS5 55 aa3.92□□□□□ -1.78
NCBP2-209ENST00000463783 LCE2AQ5TA79 106 aaPredicted RBP3.92□□□□□ -1.78
NCBP2-209ENST00000463783 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.78
NCBP2-209ENST00000463783 J3QL48 77 aa3.88□□□□□ -1.79
NCBP2-209ENST00000463783 M0QZ58 72 aa3.84□□□□□ -1.79
NCBP2-209ENST00000463783 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
NCBP2-209ENST00000463783 R4GN34 69 aa3.77□□□□□ -1.81
NCBP2-209ENST00000463783 MT1HP80294 61 aa3.74□□□□□ -1.81
NCBP2-209ENST00000463783 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
NCBP2-209ENST00000463783 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
NCBP2-209ENST00000463783 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
NCBP2-209ENST00000463783 USH2AO75445 5202 aa3.66□□□□□ -1.82
NCBP2-209ENST00000463783 LCE2DQ5TA82 110 aaPredicted RBP3.64□□□□□ -1.83
NCBP2-209ENST00000463783 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
NCBP2-209ENST00000463783 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
NCBP2-209ENST00000463783 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
NCBP2-209ENST00000463783 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
NCBP2-209ENST00000463783 MT1FP04733 61 aa3.53□□□□□ -1.84
NCBP2-209ENST00000463783 MT2AP02795 61 aa3.52□□□□□ -1.85
NCBP2-209ENST00000463783 KMT2DO14686 5537 aa3.5□□□□□ -1.85
NCBP2-209ENST00000463783 LCE2BO14633 110 aa3.5□□□□□ -1.85
NCBP2-209ENST00000463783 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
NCBP2-209ENST00000463783 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
NCBP2-209ENST00000463783 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
NCBP2-209ENST00000463783 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
NCBP2-209ENST00000463783 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
NCBP2-209ENST00000463783 TNP1P09430 55 aa3.41□□□□□ -1.86
NCBP2-209ENST00000463783 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
NCBP2-209ENST00000463783 MT1BP07438 61 aa3.38□□□□□ -1.87
NCBP2-209ENST00000463783 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
NCBP2-209ENST00000463783 MT1XP80297 61 aa3.36□□□□□ -1.87
NCBP2-209ENST00000463783 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
NCBP2-209ENST00000463783 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
NCBP2-209ENST00000463783 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
NCBP2-209ENST00000463783 M0R2T5 61 aa3.34□□□□□ -1.87
NCBP2-209ENST00000463783 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
NCBP2-209ENST00000463783 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
NCBP2-209ENST00000463783 FSIP2Q5CZC0 6907 aa3.31□□□□□ -1.88
NCBP2-209ENST00000463783 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
NCBP2-209ENST00000463783 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
NCBP2-209ENST00000463783 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
NCBP2-209ENST00000463783 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
NCBP2-209ENST00000463783 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
NCBP2-209ENST00000463783 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
NCBP2-209ENST00000463783 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
NCBP2-209ENST00000463783 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
NCBP2-209ENST00000463783 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
NCBP2-209ENST00000463783 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
NCBP2-209ENST00000463783 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
NCBP2-209ENST00000463783 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
NCBP2-209ENST00000463783 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
NCBP2-209ENST00000463783 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.91
NCBP2-209ENST00000463783 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.92
NCBP2-209ENST00000463783 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms