RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 CHKB-CPT1BH3BT56 60 aa9.84□□□□□ -0.83
PTPN18-207ENST00000462321 S4R3F8 94 aa9.82□□□□□ -0.84
PTPN18-207ENST00000462321 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
PTPN18-207ENST00000462321 LCA10Q71F78 164 aa9.78□□□□□ -0.84
PTPN18-207ENST00000462321 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
PTPN18-207ENST00000462321 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
PTPN18-207ENST00000462321 FLGP20930 4061 aaPredicted RBP9.73□□□□□ -0.85
PTPN18-207ENST00000462321 SPTSSBQ8NFR3 76 aa9.7□□□□□ -0.86
PTPN18-207ENST00000462321 FAT4Q6V0I7 4981 aa9.68□□□□□ -0.86
PTPN18-207ENST00000462321 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
PTPN18-207ENST00000462321 MT1HP80294 61 aa9.62□□□□□ -0.87
PTPN18-207ENST00000462321 M0R2T5 61 aa9.5□□□□□ -0.89
PTPN18-207ENST00000462321 Q1T7F1 81 aa9.48□□□□□ -0.89
PTPN18-207ENST00000462321 LINC01558Q9Y6Z2 57 aa9.46□□□□□ -0.89
PTPN18-207ENST00000462321 V9GYY9 64 aa9.45□□□□□ -0.9
PTPN18-207ENST00000462321 H0YAA0 97 aa9.42□□□□□ -0.9
PTPN18-207ENST00000462321 PSPHP1O15172 72 aa9.4□□□□□ -0.9
PTPN18-207ENST00000462321 PRR15LQ9BU68 103 aa9.4□□□□□ -0.9
PTPN18-207ENST00000462321 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
PTPN18-207ENST00000462321 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
PTPN18-207ENST00000462321 SEC61GP60059 68 aa9.38□□□□□ -0.91
PTPN18-207ENST00000462321 A0A1B0GU69 56 aa9.37□□□□□ -0.91
PTPN18-207ENST00000462321 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
PTPN18-207ENST00000462321 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
PTPN18-207ENST00000462321 KRTAP10-6P60371 365 aaPredicted RBP9.3□□□□□ -0.92
PTPN18-207ENST00000462321 Q5VV11 94 aa9.28□□□□□ -0.92
PTPN18-207ENST00000462321 P0C880 135 aa9.26□□□□□ -0.93
PTPN18-207ENST00000462321 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
PTPN18-207ENST00000462321 KRTAP9-8Q9BYQ0 159 aa9.23□□□□□ -0.93
PTPN18-207ENST00000462321 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
PTPN18-207ENST00000462321 MT2AP02795 61 aa9.19□□□□□ -0.94
PTPN18-207ENST00000462321 A0A1B0GU33 70 aa9.14□□□□□ -0.95
PTPN18-207ENST00000462321 MT1FP04733 61 aa9.13□□□□□ -0.95
PTPN18-207ENST00000462321 KRTAP10-10P60014 251 aa9.1□□□□□ -0.95
PTPN18-207ENST00000462321 A6NED7 52 aa9.08□□□□□ -0.96
PTPN18-207ENST00000462321 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
PTPN18-207ENST00000462321 UQCR11O14957 56 aa9.06□□□□□ -0.96
PTPN18-207ENST00000462321 R4GN34 69 aa9.05□□□□□ -0.96
PTPN18-207ENST00000462321 M0QZ58 72 aa9.04□□□□□ -0.96
PTPN18-207ENST00000462321 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
PTPN18-207ENST00000462321 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
PTPN18-207ENST00000462321 MIR22HGQ0VDD5 57 aa8.94□□□□□ -0.98
PTPN18-207ENST00000462321 A8MU10 97 aa8.92□□□□□ -0.98
PTPN18-207ENST00000462321 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
PTPN18-207ENST00000462321 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
PTPN18-207ENST00000462321 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.98
PTPN18-207ENST00000462321 CDC42SE1Q9NRR8 79 aa8.88□□□□□ -0.99
PTPN18-207ENST00000462321 LINC01554Q52M75 96 aa8.83□□□□□ -1
PTPN18-207ENST00000462321 A0A0D9SG42 100 aa8.82□□□□□ -1
PTPN18-207ENST00000462321 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
PTPN18-207ENST00000462321 A6NN06 94 aa8.73□□□□□ -1.01
PTPN18-207ENST00000462321 KRTAP19-8Q3LI54 63 aa8.72□□□□□ -1.01
PTPN18-207ENST00000462321 LCE2BO14633 110 aa8.68□□□□□ -1.02
PTPN18-207ENST00000462321 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
PTPN18-207ENST00000462321 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
PTPN18-207ENST00000462321 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
PTPN18-207ENST00000462321 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
PTPN18-207ENST00000462321 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
PTPN18-207ENST00000462321 MT1BP07438 61 aa8.6□□□□□ -1.03
PTPN18-207ENST00000462321 K7ERS5 55 aa8.58□□□□□ -1.04
PTPN18-207ENST00000462321 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
PTPN18-207ENST00000462321 USH2AO75445 5202 aa8.45□□□□□ -1.06
PTPN18-207ENST00000462321 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
PTPN18-207ENST00000462321 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
PTPN18-207ENST00000462321 MT1XP80297 61 aa8.29□□□□□ -1.08
PTPN18-207ENST00000462321 KRTAP10-5P60370 271 aa8.26□□□□□ -1.09
PTPN18-207ENST00000462321 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
PTPN18-207ENST00000462321 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
PTPN18-207ENST00000462321 SSPOA2VEC9 5147 aa8.21□□□□□ -1.09
PTPN18-207ENST00000462321 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
PTPN18-207ENST00000462321 ROMO1P60602 79 aa8.18□□□□□ -1.1
PTPN18-207ENST00000462321 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
PTPN18-207ENST00000462321 PRAC1Q96KF2 57 aa8.15□□□□□ -1.11
PTPN18-207ENST00000462321 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
PTPN18-207ENST00000462321 TNP1P09430 55 aa8.01□□□□□ -1.13
PTPN18-207ENST00000462321 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
PTPN18-207ENST00000462321 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
PTPN18-207ENST00000462321 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.14
PTPN18-207ENST00000462321 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
PTPN18-207ENST00000462321 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
PTPN18-207ENST00000462321 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
PTPN18-207ENST00000462321 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
PTPN18-207ENST00000462321 PP632Q6XCG6 107 aa7.68□□□□□ -1.18
PTPN18-207ENST00000462321 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
PTPN18-207ENST00000462321 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
PTPN18-207ENST00000462321 KMT2DO14686 5537 aa7.6□□□□□ -1.19
PTPN18-207ENST00000462321 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
PTPN18-207ENST00000462321 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
PTPN18-207ENST00000462321 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
PTPN18-207ENST00000462321 KRTAP19-5Q3LI72 72 aa7.43□□□□□ -1.22
PTPN18-207ENST00000462321 KRTAP12-3P60328 96 aa7.4□□□□□ -1.23
PTPN18-207ENST00000462321 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
PTPN18-207ENST00000462321 MT1EP04732 61 aa7.28□□□□□ -1.24
PTPN18-207ENST00000462321 KRTAP5-9P26371 169 aa7.27□□□□□ -1.25
PTPN18-207ENST00000462321 SPRR2FQ96RM1 72 aa7.27□□□□□ -1.25
PTPN18-207ENST00000462321 SYNE2Q8WXH0 6885 aaKnown RBP7.26□□□□□ -1.25
PTPN18-207ENST00000462321 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
PTPN18-207ENST00000462321 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
PTPN18-207ENST00000462321 MT1LQ93083 61 aa7.1□□□□□ -1.27
PTPN18-207ENST00000462321 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms