RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 LINC00336Q6ZUF6 198 aa2.15□□□□□ -2.07
CFHR3-204ENST00000461558 SSBP3-AS1Q7Z2R9 100 aa2.15□□□□□ -2.07
CFHR3-204ENST00000461558 MRPL34Q9BQ48 92 aaKnown RBP2.15□□□□□ -2.07
CFHR3-204ENST00000461558 TGP01266 2768 aa2.15□□□□□ -2.07
CFHR3-204ENST00000461558 FAT2Q9NYQ8 4349 aa2.13□□□□□ -2.07
CFHR3-204ENST00000461558 DNHD1Q96M86 4753 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 HYDINQ4G0P3 5121 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 C8orf87E5RJ46 101 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 KRTAP21-3Q3LHN1 58 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 Q5W150 140 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 KRTAP4-1Q9BYQ7 146 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 PRO0628Q9UI54 55 aa2.12□□□□□ -2.07
CFHR3-204ENST00000461558 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
CFHR3-204ENST00000461558 NDUFS5O43920 106 aa2.11□□□□□ -2.07
CFHR3-204ENST00000461558 PCOTHQ58A44 107 aa2.11□□□□□ -2.07
CFHR3-204ENST00000461558 SPINK6Q6UWN8 80 aa2.11□□□□□ -2.07
CFHR3-204ENST00000461558 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
CFHR3-204ENST00000461558 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
CFHR3-204ENST00000461558 COA5Q86WW8 74 aa2.1□□□□□ -2.07
CFHR3-204ENST00000461558 V9GYY9 64 aa2.1□□□□□ -2.07
CFHR3-204ENST00000461558 LRP1BQ9NZR2 4599 aa2.1□□□□□ -2.07
CFHR3-204ENST00000461558 A8MUN3 132 aa2.09□□□□□ -2.07
CFHR3-204ENST00000461558 PSPHP1O15172 72 aa2.09□□□□□ -2.07
CFHR3-204ENST00000461558 HRES1P13985 223 aa2.09□□□□□ -2.07
CFHR3-204ENST00000461558 LINC00313P59037 77 aa2.09□□□□□ -2.07
CFHR3-204ENST00000461558 Q5VV11 94 aa2.09□□□□□ -2.07
CFHR3-204ENST00000461558 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
CFHR3-204ENST00000461558 LIMD2Q9BT23 127 aa2.08□□□□□ -2.08
CFHR3-204ENST00000461558 PKHD1L1Q86WI1 4243 aa2.08□□□□□ -2.08
CFHR3-204ENST00000461558 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
CFHR3-204ENST00000461558 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
CFHR3-204ENST00000461558 LINC01558Q9Y6Z2 57 aa2.07□□□□□ -2.08
CFHR3-204ENST00000461558 SPINK1P00995 79 aa2.06□□□□□ -2.08
CFHR3-204ENST00000461558 RPS29P62273 56 aaKnown RBP2.06□□□□□ -2.08
CFHR3-204ENST00000461558 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
CFHR3-204ENST00000461558 PRR15LQ9BU68 103 aa2.06□□□□□ -2.08
CFHR3-204ENST00000461558 RETNLBQ9BQ08 111 aa2.05□□□□□ -2.08
CFHR3-204ENST00000461558 APOBP04114 4563 aaKnown RBP2.05□□□□□ -2.08
CFHR3-204ENST00000461558 DYNC1H1Q14204 4646 aaKnown RBP2.04□□□□□ -2.08
CFHR3-204ENST00000461558 CHKB-CPT1BH3BT56 60 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 ACYP2P14621 99 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 SPAG11AQ6PDA7 123 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 LCA10Q71F78 164 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 LINC00304Q8N9R0 145 aa2.04□□□□□ -2.08
CFHR3-204ENST00000461558 SMR3BP02814 79 aaPredicted RBP2.02□□□□□ -2.09
CFHR3-204ENST00000461558 SPINK7P58062 85 aa2.02□□□□□ -2.09
CFHR3-204ENST00000461558 CDC42SE1Q9NRR8 79 aa2.02□□□□□ -2.09
CFHR3-204ENST00000461558 A8MUU9 505 aa2.01□□□□□ -2.09
CFHR3-204ENST00000461558 C20orf166-AS1Q96NR2 134 aa2.01□□□□□ -2.09
CFHR3-204ENST00000461558 RYR2Q92736 4967 aa2□□□□□ -2.09
CFHR3-204ENST00000461558 A6NED7 52 aa2□□□□□ -2.09
CFHR3-204ENST00000461558 ATP11AUNQ6ZP68 121 aa2□□□□□ -2.09
CFHR3-204ENST00000461558 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
CFHR3-204ENST00000461558 A6NN06 94 aa1.99□□□□□ -2.09
CFHR3-204ENST00000461558 C9orf92A6NGG3 77 aa1.98□□□□□ -2.09
CFHR3-204ENST00000461558 FAT1Q14517 4588 aa1.97□□□□□ -2.09
CFHR3-204ENST00000461558 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
CFHR3-204ENST00000461558 TNXBP22105 4242 aa1.96□□□□□ -2.09
CFHR3-204ENST00000461558 A0A1B0GU69 56 aa1.96□□□□□ -2.1
CFHR3-204ENST00000461558 SPATA8Q6RVD6 105 aa1.96□□□□□ -2.1
CFHR3-204ENST00000461558 SPTSSBQ8NFR3 76 aa1.96□□□□□ -2.1
CFHR3-204ENST00000461558 FLG2Q5D862 2391 aaPredicted RBP1.96□□□□□ -2.1
CFHR3-204ENST00000461558 FAT3Q8TDW7 4589 aa1.96□□□□□ -2.1
CFHR3-204ENST00000461558 KTN1-AS1Q86SY8 53 aa1.95□□□□□ -2.1
CFHR3-204ENST00000461558 HSPG2P98160 4391 aa1.95□□□□□ -2.1
CFHR3-204ENST00000461558 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
CFHR3-204ENST00000461558 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
CFHR3-204ENST00000461558 UQCR11O14957 56 aa1.93□□□□□ -2.1
CFHR3-204ENST00000461558 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
CFHR3-204ENST00000461558 Q5VSD8 79 aa1.93□□□□□ -2.1
CFHR3-204ENST00000461558 MT1HL1P0DM35 61 aa1.92□□□□□ -2.1
CFHR3-204ENST00000461558 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
CFHR3-204ENST00000461558 RPL37P61927 97 aaKnown RBP1.92□□□□□ -2.1
CFHR3-204ENST00000461558 COX6B2Q6YFQ2 88 aa1.92□□□□□ -2.1
CFHR3-204ENST00000461558 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
CFHR3-204ENST00000461558 RYR1P21817 5038 aa1.91□□□□□ -2.1
CFHR3-204ENST00000461558 H0YAA0 97 aa1.9□□□□□ -2.11
CFHR3-204ENST00000461558 RYR3Q15413 4870 aa1.89□□□□□ -2.11
CFHR3-204ENST00000461558 H1FX-AS1Q4G0G2 97 aa1.89□□□□□ -2.11
CFHR3-204ENST00000461558 RBM12B-AS1Q9P1G2 102 aa1.89□□□□□ -2.11
CFHR3-204ENST00000461558 A0A1B0GU33 70 aa1.88□□□□□ -2.11
CFHR3-204ENST00000461558 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
CFHR3-204ENST00000461558 ADM2Q7Z4H4 148 aa1.88□□□□□ -2.11
CFHR3-204ENST00000461558 TPRXLQ17RH7 258 aa1.85□□□□□ -2.11
CFHR3-204ENST00000461558 S4R3F8 94 aa1.85□□□□□ -2.11
CFHR3-204ENST00000461558 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
CFHR3-204ENST00000461558 KIAA1109Q2LD37 5005 aa1.84□□□□□ -2.11
CFHR3-204ENST00000461558 MYCBP2O75592 4640 aa1.84□□□□□ -2.12
CFHR3-204ENST00000461558 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
CFHR3-204ENST00000461558 P0C880 135 aa1.82□□□□□ -2.12
CFHR3-204ENST00000461558 DMBT1Q9UGM3 2413 aaPredicted RBP1.81□□□□□ -2.12
CFHR3-204ENST00000461558 CSAG1Q6PB30 78 aa1.81□□□□□ -2.12
CFHR3-204ENST00000461558 LINC01554Q52M75 96 aa1.79□□□□□ -2.12
CFHR3-204ENST00000461558 LRP2P98164 4655 aa1.79□□□□□ -2.12
CFHR3-204ENST00000461558 LPAP08519 4548 aa1.78□□□□□ -2.12
CFHR3-204ENST00000461558 MUC17Q685J3 4493 aa1.78□□□□□ -2.12
CFHR3-204ENST00000461558 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms