RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.64
HDAC9-219ENST00000461159 PKHD1L1Q86WI1 4243 aa4.83□□□□□ -1.64
HDAC9-219ENST00000461159 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-219ENST00000461159 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
HDAC9-219ENST00000461159 KRTAP1-4P0C5Y4 121 aa4.8□□□□□ -1.64
HDAC9-219ENST00000461159 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
HDAC9-219ENST00000461159 Q5VSD8 79 aa4.79□□□□□ -1.64
HDAC9-219ENST00000461159 SSBP3-AS1Q7Z2R9 100 aa4.78□□□□□ -1.64
HDAC9-219ENST00000461159 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
HDAC9-219ENST00000461159 TNXBP22105 4242 aa4.75□□□□□ -1.65
HDAC9-219ENST00000461159 FAT3Q8TDW7 4589 aa4.75□□□□□ -1.65
HDAC9-219ENST00000461159 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
HDAC9-219ENST00000461159 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
HDAC9-219ENST00000461159 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
HDAC9-219ENST00000461159 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
HDAC9-219ENST00000461159 HERC2O95714 4834 aa4.73□□□□□ -1.65
HDAC9-219ENST00000461159 TYMSOSQ8TAI1 123 aa4.73□□□□□ -1.65
HDAC9-219ENST00000461159 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
HDAC9-219ENST00000461159 H0YAA0 97 aa4.69□□□□□ -1.66
HDAC9-219ENST00000461159 Q8N1X5 172 aa4.69□□□□□ -1.66
HDAC9-219ENST00000461159 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
HDAC9-219ENST00000461159 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.67
HDAC9-219ENST00000461159 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
HDAC9-219ENST00000461159 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
HDAC9-219ENST00000461159 SPINK1P00995 79 aa4.63□□□□□ -1.67
HDAC9-219ENST00000461159 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
HDAC9-219ENST00000461159 LCE2AQ5TA79 106 aaPredicted RBP4.61□□□□□ -1.67
HDAC9-219ENST00000461159 HERC1Q15751 4861 aa4.6□□□□□ -1.67
HDAC9-219ENST00000461159 LPAP08519 4548 aa4.59□□□□□ -1.67
HDAC9-219ENST00000461159 KRTAP10-8P60410 259 aa4.59□□□□□ -1.67
HDAC9-219ENST00000461159 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
HDAC9-219ENST00000461159 LCE2BO14633 110 aa4.57□□□□□ -1.68
HDAC9-219ENST00000461159 A0A1B0GU33 70 aa4.56□□□□□ -1.68
HDAC9-219ENST00000461159 C9orf92A6NGG3 77 aa4.55□□□□□ -1.68
HDAC9-219ENST00000461159 LRP2P98164 4655 aa4.55□□□□□ -1.68
HDAC9-219ENST00000461159 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
HDAC9-219ENST00000461159 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
HDAC9-219ENST00000461159 MUC2Q02817 5179 aa4.45□□□□□ -1.7
HDAC9-219ENST00000461159 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
HDAC9-219ENST00000461159 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
HDAC9-219ENST00000461159 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
HDAC9-219ENST00000461159 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
HDAC9-219ENST00000461159 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.7
HDAC9-219ENST00000461159 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
HDAC9-219ENST00000461159 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
HDAC9-219ENST00000461159 XP32Q5T750 250 aa4.36□□□□□ -1.71
HDAC9-219ENST00000461159 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
HDAC9-219ENST00000461159 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
HDAC9-219ENST00000461159 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-219ENST00000461159 R4GN34 69 aa4.26□□□□□ -1.73
HDAC9-219ENST00000461159 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
HDAC9-219ENST00000461159 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
HDAC9-219ENST00000461159 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
HDAC9-219ENST00000461159 A0A0D9SG42 100 aa4.23□□□□□ -1.73
HDAC9-219ENST00000461159 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
HDAC9-219ENST00000461159 S4R3F8 94 aa4.2□□□□□ -1.74
HDAC9-219ENST00000461159 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
HDAC9-219ENST00000461159 INE1O15225 51 aa4.16□□□□□ -1.74
HDAC9-219ENST00000461159 KRTAP12-2P59991 146 aa4.1□□□□□ -1.75
HDAC9-219ENST00000461159 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
HDAC9-219ENST00000461159 M0QZ58 72 aa4.06□□□□□ -1.76
HDAC9-219ENST00000461159 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
HDAC9-219ENST00000461159 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.77
HDAC9-219ENST00000461159 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
HDAC9-219ENST00000461159 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
HDAC9-219ENST00000461159 M0R2T5 61 aa3.89□□□□□ -1.79
HDAC9-219ENST00000461159 MT1HP80294 61 aa3.87□□□□□ -1.79
HDAC9-219ENST00000461159 USH2AO75445 5202 aa3.75□□□□□ -1.81
HDAC9-219ENST00000461159 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
HDAC9-219ENST00000461159 MT1FP04733 61 aa3.71□□□□□ -1.82
HDAC9-219ENST00000461159 KRTAP10-10P60014 251 aa3.71□□□□□ -1.82
HDAC9-219ENST00000461159 MT2AP02795 61 aa3.7□□□□□ -1.82
HDAC9-219ENST00000461159 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
HDAC9-219ENST00000461159 TNP1P09430 55 aa3.63□□□□□ -1.83
HDAC9-219ENST00000461159 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
HDAC9-219ENST00000461159 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
HDAC9-219ENST00000461159 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
HDAC9-219ENST00000461159 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
HDAC9-219ENST00000461159 MT1BP07438 61 aa3.48□□□□□ -1.85
HDAC9-219ENST00000461159 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
HDAC9-219ENST00000461159 KMT2DO14686 5537 aa3.46□□□□□ -1.86
HDAC9-219ENST00000461159 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
HDAC9-219ENST00000461159 MT1XP80297 61 aa3.36□□□□□ -1.87
HDAC9-219ENST00000461159 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
HDAC9-219ENST00000461159 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
HDAC9-219ENST00000461159 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
HDAC9-219ENST00000461159 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
HDAC9-219ENST00000461159 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
HDAC9-219ENST00000461159 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
HDAC9-219ENST00000461159 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
HDAC9-219ENST00000461159 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
HDAC9-219ENST00000461159 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
HDAC9-219ENST00000461159 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
HDAC9-219ENST00000461159 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
HDAC9-219ENST00000461159 KRTAP4-8A0A0G2JLE6 195 aa3.21□□□□□ -1.9
HDAC9-219ENST00000461159 KRTAP4-8Q9BYQ9 185 aa3.21□□□□□ -1.9
HDAC9-219ENST00000461159 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
HDAC9-219ENST00000461159 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
HDAC9-219ENST00000461159 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
HDAC9-219ENST00000461159 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms