RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 USH2AO75445 5202 aa9.27□□□□□ -0.93
SNAPC3-204ENST00000461041 A8MUN3 132 aa9.26□□□□□ -0.93
SNAPC3-204ENST00000461041 FAM236AA0A1B0GUQ0 79 aa9.24□□□□□ -0.93
SNAPC3-204ENST00000461041 FAM236BA0A1B0GV22 79 aa9.24□□□□□ -0.93
SNAPC3-204ENST00000461041 SMIM20Q8N5G0 67 aa9.19□□□□□ -0.94
SNAPC3-204ENST00000461041 TRAV7A0A075B6U4 112 aa9.18□□□□□ -0.94
SNAPC3-204ENST00000461041 NDUFC1O43677 76 aa9.18□□□□□ -0.94
SNAPC3-204ENST00000461041 KRTAP19-1Q8IUB9 90 aa9.14□□□□□ -0.95
SNAPC3-204ENST00000461041 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
SNAPC3-204ENST00000461041 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
SNAPC3-204ENST00000461041 H0YAA0 97 aa9.04□□□□□ -0.96
SNAPC3-204ENST00000461041 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
SNAPC3-204ENST00000461041 SPRR2GQ9BYE4 73 aa9.04□□□□□ -0.96
SNAPC3-204ENST00000461041 SNURFQ9Y675 71 aa8.98□□□□□ -0.97
SNAPC3-204ENST00000461041 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
SNAPC3-204ENST00000461041 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
SNAPC3-204ENST00000461041 ADM2Q7Z4H4 148 aa8.95□□□□□ -0.98
SNAPC3-204ENST00000461041 KRTAP19-8Q3LI54 63 aa8.94□□□□□ -0.98
SNAPC3-204ENST00000461041 MT1BP07438 61 aa8.92□□□□□ -0.98
SNAPC3-204ENST00000461041 ACYP2P14621 99 aa8.92□□□□□ -0.98
SNAPC3-204ENST00000461041 Q5VV11 94 aa8.92□□□□□ -0.98
SNAPC3-204ENST00000461041 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.91□□□□□ -0.98
SNAPC3-204ENST00000461041 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
SNAPC3-204ENST00000461041 FCGBPQ9Y6R7 5405 aaPredicted RBP8.91□□□□□ -0.98
SNAPC3-204ENST00000461041 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
SNAPC3-204ENST00000461041 P0C880 135 aa8.79□□□□□ -1
SNAPC3-204ENST00000461041 COX7CP15954 63 aa8.76□□□□□ -1.01
SNAPC3-204ENST00000461041 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
SNAPC3-204ENST00000461041 CHKB-CPT1BH3BT56 60 aa8.75□□□□□ -1.01
SNAPC3-204ENST00000461041 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
SNAPC3-204ENST00000461041 A6NN06 94 aa8.71□□□□□ -1.02
SNAPC3-204ENST00000461041 R4GN34 69 aa8.7□□□□□ -1.02
SNAPC3-204ENST00000461041 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
SNAPC3-204ENST00000461041 M0QZ58 72 aa8.65□□□□□ -1.02
SNAPC3-204ENST00000461041 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.03
SNAPC3-204ENST00000461041 H7BZZ5 65 aa8.57□□□□□ -1.04
SNAPC3-204ENST00000461041 ANAPC13Q9BS18 74 aa8.57□□□□□ -1.04
SNAPC3-204ENST00000461041 COA5Q86WW8 74 aa8.56□□□□□ -1.04
SNAPC3-204ENST00000461041 MACF1Q9UPN3 7388 aaKnown RBP8.54□□□□□ -1.04
SNAPC3-204ENST00000461041 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
SNAPC3-204ENST00000461041 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
SNAPC3-204ENST00000461041 MT1XP80297 61 aa8.42□□□□□ -1.06
SNAPC3-204ENST00000461041 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
SNAPC3-204ENST00000461041 CCDC179H3BU77 68 aa8.41□□□□□ -1.06
SNAPC3-204ENST00000461041 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
SNAPC3-204ENST00000461041 SYNE2Q8WXH0 6885 aaKnown RBP8.36□□□□□ -1.07
SNAPC3-204ENST00000461041 SEC61GP60059 68 aa8.31□□□□□ -1.08
SNAPC3-204ENST00000461041 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
SNAPC3-204ENST00000461041 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
SNAPC3-204ENST00000461041 H3BS24 57 aa8.26□□□□□ -1.09
SNAPC3-204ENST00000461041 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
SNAPC3-204ENST00000461041 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
SNAPC3-204ENST00000461041 A0A1B0GU33 70 aa8.15□□□□□ -1.1
SNAPC3-204ENST00000461041 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
SNAPC3-204ENST00000461041 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
SNAPC3-204ENST00000461041 A0A1B0GU69 56 aa8.11□□□□□ -1.11
SNAPC3-204ENST00000461041 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
SNAPC3-204ENST00000461041 TMEM258P61165 79 aa8.09□□□□□ -1.11
SNAPC3-204ENST00000461041 KRTAP4-6Q9BYQ5 205 aa8.09□□□□□ -1.11
SNAPC3-204ENST00000461041 A0A0D9SG42 100 aa8.08□□□□□ -1.12
SNAPC3-204ENST00000461041 KRTAP10-7P60409 375 aaPredicted RBP8.05□□□□□ -1.12
SNAPC3-204ENST00000461041 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
SNAPC3-204ENST00000461041 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
SNAPC3-204ENST00000461041 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
SNAPC3-204ENST00000461041 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
SNAPC3-204ENST00000461041 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
SNAPC3-204ENST00000461041 KMT2DO14686 5537 aa7.96□□□□□ -1.13
SNAPC3-204ENST00000461041 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
SNAPC3-204ENST00000461041 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
SNAPC3-204ENST00000461041 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
SNAPC3-204ENST00000461041 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
SNAPC3-204ENST00000461041 LINC01558Q9Y6Z2 57 aa7.93□□□□□ -1.14
SNAPC3-204ENST00000461041 SMIM26A0A096LP01 95 aa7.92□□□□□ -1.14
SNAPC3-204ENST00000461041 MUC12Q9UKN1 5478 aa7.89□□□□□ -1.15
SNAPC3-204ENST00000461041 A8MU10 97 aa7.87□□□□□ -1.15
SNAPC3-204ENST00000461041 NEBP20929 6669 aa7.84□□□□□ -1.15
SNAPC3-204ENST00000461041 SPRR2EP22531 72 aa7.78□□□□□ -1.16
SNAPC3-204ENST00000461041 SPRR2BP35325 72 aa7.78□□□□□ -1.16
SNAPC3-204ENST00000461041 SPRR2AP35326 72 aa7.78□□□□□ -1.16
SNAPC3-204ENST00000461041 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
SNAPC3-204ENST00000461041 MDN1Q9NU22 5596 aa7.71□□□□□ -1.17
SNAPC3-204ENST00000461041 UQCR11O14957 56 aa7.68□□□□□ -1.18
SNAPC3-204ENST00000461041 KRTAP20-1Q3LI63 56 aa7.67□□□□□ -1.18
SNAPC3-204ENST00000461041 V9GYY9 64 aa7.6□□□□□ -1.19
SNAPC3-204ENST00000461041 Q1T7F1 81 aa7.57□□□□□ -1.2
SNAPC3-204ENST00000461041 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
SNAPC3-204ENST00000461041 PSPHP1O15172 72 aa7.54□□□□□ -1.2
SNAPC3-204ENST00000461041 KRTAP2-3P0C7H8 128 aa7.54□□□□□ -1.2
SNAPC3-204ENST00000461041 PCP4P48539 62 aa7.54□□□□□ -1.2
SNAPC3-204ENST00000461041 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
SNAPC3-204ENST00000461041 KRTAP2-4Q9BYR9 128 aa7.54□□□□□ -1.2
SNAPC3-204ENST00000461041 SPRR2DP22532 72 aa7.52□□□□□ -1.21
SNAPC3-204ENST00000461041 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.21
SNAPC3-204ENST00000461041 TNP1P09430 55 aa7.48□□□□□ -1.21
SNAPC3-204ENST00000461041 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
SNAPC3-204ENST00000461041 MT1EP04732 61 aa7.44□□□□□ -1.22
SNAPC3-204ENST00000461041 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.22
SNAPC3-204ENST00000461041 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
SNAPC3-204ENST00000461041 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
SNAPC3-204ENST00000461041 K7ERS5 55 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms