RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 FAM236AA0A1B0GUQ0 79 aa9.57□□□□□ -0.88
RPUSD3-210ENST00000460909 FAM236BA0A1B0GV22 79 aa9.57□□□□□ -0.88
RPUSD3-210ENST00000460909 A8MUN3 132 aa9.54□□□□□ -0.88
RPUSD3-210ENST00000460909 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
RPUSD3-210ENST00000460909 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
RPUSD3-210ENST00000460909 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
RPUSD3-210ENST00000460909 NDUFC1O43677 76 aa9.42□□□□□ -0.9
RPUSD3-210ENST00000460909 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
RPUSD3-210ENST00000460909 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
RPUSD3-210ENST00000460909 H0YAA0 97 aa9.31□□□□□ -0.92
RPUSD3-210ENST00000460909 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
RPUSD3-210ENST00000460909 SERP2Q8N6R1 65 aa9.3□□□□□ -0.92
RPUSD3-210ENST00000460909 SNURFQ9Y675 71 aa9.28□□□□□ -0.92
RPUSD3-210ENST00000460909 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
RPUSD3-210ENST00000460909 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
RPUSD3-210ENST00000460909 FCGBPQ9Y6R7 5405 aaPredicted RBP9.22□□□□□ -0.93
RPUSD3-210ENST00000460909 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.94
RPUSD3-210ENST00000460909 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
RPUSD3-210ENST00000460909 ACYP2P14621 99 aa9.19□□□□□ -0.94
RPUSD3-210ENST00000460909 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
RPUSD3-210ENST00000460909 MT1BP07438 61 aa9.18□□□□□ -0.94
RPUSD3-210ENST00000460909 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
RPUSD3-210ENST00000460909 Q5VV11 94 aa9.12□□□□□ -0.95
RPUSD3-210ENST00000460909 COX7CP15954 63 aa9.09□□□□□ -0.95
RPUSD3-210ENST00000460909 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
RPUSD3-210ENST00000460909 P0C880 135 aa9.06□□□□□ -0.96
RPUSD3-210ENST00000460909 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
RPUSD3-210ENST00000460909 SPTSSBQ8NFR3 76 aa8.99□□□□□ -0.97
RPUSD3-210ENST00000460909 CHKB-CPT1BH3BT56 60 aa8.98□□□□□ -0.97
RPUSD3-210ENST00000460909 CYSTM1Q9H1C7 97 aa8.95□□□□□ -0.98
RPUSD3-210ENST00000460909 KRTAP9-7A8MTY7 169 aa8.93□□□□□ -0.98
RPUSD3-210ENST00000460909 H7BZZ5 65 aa8.91□□□□□ -0.98
RPUSD3-210ENST00000460909 R4GN34 69 aa8.91□□□□□ -0.98
RPUSD3-210ENST00000460909 A6NN06 94 aa8.89□□□□□ -0.99
RPUSD3-210ENST00000460909 KRTAP10-5P60370 271 aa8.89□□□□□ -0.99
RPUSD3-210ENST00000460909 MACF1Q9UPN3 7388 aaKnown RBP8.88□□□□□ -0.99
RPUSD3-210ENST00000460909 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
RPUSD3-210ENST00000460909 M0QZ58 72 aa8.86□□□□□ -0.99
RPUSD3-210ENST00000460909 COA5Q86WW8 74 aa8.84□□□□□ -0.99
RPUSD3-210ENST00000460909 CCDC179H3BU77 68 aa8.74□□□□□ -1.01
RPUSD3-210ENST00000460909 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
RPUSD3-210ENST00000460909 LINC01554Q52M75 96 aa8.7□□□□□ -1.02
RPUSD3-210ENST00000460909 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
RPUSD3-210ENST00000460909 MT1XP80297 61 aa8.67□□□□□ -1.02
RPUSD3-210ENST00000460909 KRTAP6-3Q3LI67 103 aa8.6□□□□□ -1.03
RPUSD3-210ENST00000460909 PRO2289Q9P1D8 64 aa8.6□□□□□ -1.03
RPUSD3-210ENST00000460909 KRTAP13-4Q3LI77 160 aa8.59□□□□□ -1.03
RPUSD3-210ENST00000460909 SEC61GP60059 68 aa8.53□□□□□ -1.04
RPUSD3-210ENST00000460909 SERP1Q9Y6X1 66 aa8.52□□□□□ -1.05
RPUSD3-210ENST00000460909 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
RPUSD3-210ENST00000460909 A0A1B0GU33 70 aa8.4□□□□□ -1.06
RPUSD3-210ENST00000460909 TMEM258P61165 79 aa8.4□□□□□ -1.06
RPUSD3-210ENST00000460909 KRTAP12-2P59991 146 aa8.39□□□□□ -1.07
RPUSD3-210ENST00000460909 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
RPUSD3-210ENST00000460909 A0A1B0GU69 56 aa8.35□□□□□ -1.07
RPUSD3-210ENST00000460909 KRTAP5-9P26371 169 aa8.35□□□□□ -1.07
RPUSD3-210ENST00000460909 KMT2DO14686 5537 aa8.32□□□□□ -1.08
RPUSD3-210ENST00000460909 A0A0D9SG42 100 aa8.3□□□□□ -1.08
RPUSD3-210ENST00000460909 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
RPUSD3-210ENST00000460909 KRTAP10-12P60413 245 aa8.24□□□□□ -1.09
RPUSD3-210ENST00000460909 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
RPUSD3-210ENST00000460909 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
RPUSD3-210ENST00000460909 MUC12Q9UKN1 5478 aa8.22□□□□□ -1.09
RPUSD3-210ENST00000460909 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.1
RPUSD3-210ENST00000460909 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
RPUSD3-210ENST00000460909 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
RPUSD3-210ENST00000460909 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
RPUSD3-210ENST00000460909 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
RPUSD3-210ENST00000460909 NEBP20929 6669 aa8.15□□□□□ -1.1
RPUSD3-210ENST00000460909 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
RPUSD3-210ENST00000460909 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
RPUSD3-210ENST00000460909 A8MU10 97 aa8.12□□□□□ -1.11
RPUSD3-210ENST00000460909 SPRR2FQ96RM1 72 aa8.12□□□□□ -1.11
RPUSD3-210ENST00000460909 MDN1Q9NU22 5596 aa8.02□□□□□ -1.13
RPUSD3-210ENST00000460909 UQCR11O14957 56 aa7.93□□□□□ -1.14
RPUSD3-210ENST00000460909 SPRR2EP22531 72 aa7.92□□□□□ -1.14
RPUSD3-210ENST00000460909 SPRR2BP35325 72 aa7.92□□□□□ -1.14
RPUSD3-210ENST00000460909 SPRR2AP35326 72 aa7.92□□□□□ -1.14
RPUSD3-210ENST00000460909 LCE1AQ5T7P2 110 aa7.91□□□□□ -1.14
RPUSD3-210ENST00000460909 PCP4P48539 62 aa7.89□□□□□ -1.15
RPUSD3-210ENST00000460909 Q1T7F1 81 aa7.87□□□□□ -1.15
RPUSD3-210ENST00000460909 V9GYY9 64 aa7.86□□□□□ -1.15
RPUSD3-210ENST00000460909 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
RPUSD3-210ENST00000460909 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
RPUSD3-210ENST00000460909 PSPHP1O15172 72 aa7.8□□□□□ -1.16
RPUSD3-210ENST00000460909 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
RPUSD3-210ENST00000460909 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
RPUSD3-210ENST00000460909 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
RPUSD3-210ENST00000460909 TNP1P09430 55 aa7.68□□□□□ -1.18
RPUSD3-210ENST00000460909 KRTAP2-3P0C7H8 128 aa7.68□□□□□ -1.18
RPUSD3-210ENST00000460909 KRTAP2-4Q9BYR9 128 aa7.68□□□□□ -1.18
RPUSD3-210ENST00000460909 MT1EP04732 61 aa7.66□□□□□ -1.18
RPUSD3-210ENST00000460909 SPRR2DP22532 72 aa7.66□□□□□ -1.18
RPUSD3-210ENST00000460909 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
RPUSD3-210ENST00000460909 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
RPUSD3-210ENST00000460909 A6NED7 52 aa7.53□□□□□ -1.2
RPUSD3-210ENST00000460909 K7ERS5 55 aa7.53□□□□□ -1.2
RPUSD3-210ENST00000460909 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
RPUSD3-210ENST00000460909 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.21
RPUSD3-210ENST00000460909 KRTAP2-2Q9BYT5 123 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms