RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 A0A096LPF7 62 aa2.56□□□□□ -2
RGPD6-206ENST00000459645 DSCR10P59022 87 aa2.56□□□□□ -2
RGPD6-206ENST00000459645 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
RGPD6-206ENST00000459645 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
RGPD6-206ENST00000459645 HTN1P15515 57 aa2.55□□□□□ -2
RGPD6-206ENST00000459645 COX6A2Q02221 97 aa2.55□□□□□ -2
RGPD6-206ENST00000459645 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
RGPD6-206ENST00000459645 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
RGPD6-206ENST00000459645 A0A1W2PNN7 141 aa2.54□□□□□ -2
RGPD6-206ENST00000459645 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
RGPD6-206ENST00000459645 USH2AO75445 5202 aa2.53□□□□□ -2
RGPD6-206ENST00000459645 A8MTW9 85 aa2.53□□□□□ -2
RGPD6-206ENST00000459645 SPINK13Q1W4C9 94 aa2.53□□□□□ -2
RGPD6-206ENST00000459645 WFDC10BQ8IUB3 73 aa2.53□□□□□ -2
RGPD6-206ENST00000459645 PRO0255Q9UI72 69 aa2.53□□□□□ -2
RGPD6-206ENST00000459645 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
RGPD6-206ENST00000459645 K7EQZ3 153 aa2.52□□□□□ -2.01
RGPD6-206ENST00000459645 FAM168BA1KXE4 195 aa2.51□□□□□ -2.01
RGPD6-206ENST00000459645 C14orf177Q52M58 125 aa2.51□□□□□ -2.01
RGPD6-206ENST00000459645 LINC01556Q5JQF7 62 aa2.51□□□□□ -2.01
RGPD6-206ENST00000459645 PRR9Q5T870 116 aa2.51□□□□□ -2.01
RGPD6-206ENST00000459645 KRTAP4-7Q9BYR0 210 aa2.51□□□□□ -2.01
RGPD6-206ENST00000459645 GVQW2A0A096LPI5 108 aaPredicted RBP2.5□□□□□ -2.01
RGPD6-206ENST00000459645 IGKV2-24A0A0C4DH68 120 aa2.5□□□□□ -2.01
RGPD6-206ENST00000459645 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
RGPD6-206ENST00000459645 KRTAP11-1Q8IUC1 163 aa2.5□□□□□ -2.01
RGPD6-206ENST00000459645 Q96NJ1 140 aa2.5□□□□□ -2.01
RGPD6-206ENST00000459645 TOMM7Q9P0U1 55 aa2.5□□□□□ -2.01
RGPD6-206ENST00000459645 C6orf48Q9UBA6 75 aa2.5□□□□□ -2.01
RGPD6-206ENST00000459645 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
RGPD6-206ENST00000459645 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
RGPD6-206ENST00000459645 NEBP20929 6669 aa2.49□□□□□ -2.01
RGPD6-206ENST00000459645 Q8N377 158 aa2.48□□□□□ -2.01
RGPD6-206ENST00000459645 A0A1B0GUV1 79 aa2.47□□□□□ -2.01
RGPD6-206ENST00000459645 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
RGPD6-206ENST00000459645 SPINK6Q6UWN8 80 aa2.47□□□□□ -2.01
RGPD6-206ENST00000459645 SSBP3-AS1Q7Z2R9 100 aa2.46□□□□□ -2.02
RGPD6-206ENST00000459645 WFDC13Q8IUB5 93 aa2.46□□□□□ -2.02
RGPD6-206ENST00000459645 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
RGPD6-206ENST00000459645 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
RGPD6-206ENST00000459645 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
RGPD6-206ENST00000459645 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
RGPD6-206ENST00000459645 PCOTHQ58A44 107 aa2.43□□□□□ -2.02
RGPD6-206ENST00000459645 MRPL34Q9BQ48 92 aaKnown RBP2.43□□□□□ -2.02
RGPD6-206ENST00000459645 KRTAP4-1Q9BYQ7 146 aa2.42□□□□□ -2.02
RGPD6-206ENST00000459645 CRIPTQ9P021 101 aa2.42□□□□□ -2.02
RGPD6-206ENST00000459645 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
RGPD6-206ENST00000459645 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
RGPD6-206ENST00000459645 MMP24-AS1A0A0U1RRL7 71 aa2.4□□□□□ -2.03
RGPD6-206ENST00000459645 INE1O15225 51 aa2.4□□□□□ -2.03
RGPD6-206ENST00000459645 MT1HP80294 61 aa2.4□□□□□ -2.03
RGPD6-206ENST00000459645 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
RGPD6-206ENST00000459645 Q6ZRX8 168 aa2.39□□□□□ -2.03
RGPD6-206ENST00000459645 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
RGPD6-206ENST00000459645 KRTAP4-9Q9BYQ8 210 aa2.39□□□□□ -2.03
RGPD6-206ENST00000459645 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
RGPD6-206ENST00000459645 KRTAP19-2Q3LHN2 52 aa2.37□□□□□ -2.03
RGPD6-206ENST00000459645 R4GN34 69 aa2.37□□□□□ -2.03
RGPD6-206ENST00000459645 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
RGPD6-206ENST00000459645 SPRR1AP35321 89 aa2.36□□□□□ -2.03
RGPD6-206ENST00000459645 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
RGPD6-206ENST00000459645 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
RGPD6-206ENST00000459645 CLPSL2Q6UWE3 100 aa2.36□□□□□ -2.03
RGPD6-206ENST00000459645 TPRXLQ17RH7 258 aa2.34□□□□□ -2.03
RGPD6-206ENST00000459645 IGFL1Q6UW32 110 aa2.34□□□□□ -2.03
RGPD6-206ENST00000459645 H0YAA0 97 aa2.33□□□□□ -2.04
RGPD6-206ENST00000459645 SPRR1BP22528 89 aa2.32□□□□□ -2.04
RGPD6-206ENST00000459645 DEFB105AQ8NG35 78 aa2.32□□□□□ -2.04
RGPD6-206ENST00000459645 KRTAP9-8Q9BYQ0 159 aa2.32□□□□□ -2.04
RGPD6-206ENST00000459645 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
RGPD6-206ENST00000459645 KRTAP1-4P0C5Y4 121 aa2.31□□□□□ -2.04
RGPD6-206ENST00000459645 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
RGPD6-206ENST00000459645 KRTAP13-3Q3SY46 172 aa2.31□□□□□ -2.04
RGPD6-206ENST00000459645 H1FX-AS1Q4G0G2 97 aa2.31□□□□□ -2.04
RGPD6-206ENST00000459645 TYMSOSQ8TAI1 123 aa2.31□□□□□ -2.04
RGPD6-206ENST00000459645 UNQ6190/PRO20217Q6UXQ8 127 aa2.3□□□□□ -2.04
RGPD6-206ENST00000459645 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
RGPD6-206ENST00000459645 KMT2DO14686 5537 aa2.29□□□□□ -2.04
RGPD6-206ENST00000459645 A0A096LNI7 61 aa2.29□□□□□ -2.04
RGPD6-206ENST00000459645 M0R2T5 61 aa2.29□□□□□ -2.04
RGPD6-206ENST00000459645 IGKV2D-30A0A075B6S6 120 aa2.28□□□□□ -2.04
RGPD6-206ENST00000459645 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
RGPD6-206ENST00000459645 MDN1Q9NU22 5596 aa2.27□□□□□ -2.05
RGPD6-206ENST00000459645 IGKV2-30P06310 120 aa2.27□□□□□ -2.05
RGPD6-206ENST00000459645 KRTAP12-2P59991 146 aa2.25□□□□□ -2.05
RGPD6-206ENST00000459645 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
RGPD6-206ENST00000459645 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
RGPD6-206ENST00000459645 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
RGPD6-206ENST00000459645 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
RGPD6-206ENST00000459645 KRTAP13-2Q52LG2 175 aa2.18□□□□□ -2.06
RGPD6-206ENST00000459645 PRLHP81277 87 aa2.16□□□□□ -2.06
RGPD6-206ENST00000459645 KRTAP9-3Q9BYQ3 159 aa2.16□□□□□ -2.06
RGPD6-206ENST00000459645 MT2AP02795 61 aa2.15□□□□□ -2.07
RGPD6-206ENST00000459645 SPINK1P00995 79 aa2.14□□□□□ -2.07
RGPD6-206ENST00000459645 MT1FP04733 61 aa2.14□□□□□ -2.07
RGPD6-206ENST00000459645 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
RGPD6-206ENST00000459645 KRTAP7-1Q8IUC3 87 aa2.13□□□□□ -2.07
RGPD6-206ENST00000459645 KRTAP3-1Q9BYR8 98 aa2.12□□□□□ -2.07
RGPD6-206ENST00000459645 LCE5AQ5TCM9 118 aa2.11□□□□□ -2.07
RGPD6-206ENST00000459645 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms