RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 MT1HP80294 61 aa5.57□□□□□ -1.52
TRAF4-206ENST00000454852 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
TRAF4-206ENST00000454852 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
TRAF4-206ENST00000454852 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
TRAF4-206ENST00000454852 S4R3F8 94 aa5.46□□□□□ -1.54
TRAF4-206ENST00000454852 ACYP2P14621 99 aa5.45□□□□□ -1.54
TRAF4-206ENST00000454852 LCA10Q71F78 164 aa5.44□□□□□ -1.54
TRAF4-206ENST00000454852 COA5Q86WW8 74 aa5.43□□□□□ -1.54
TRAF4-206ENST00000454852 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
TRAF4-206ENST00000454852 M0R2T5 61 aa5.42□□□□□ -1.54
TRAF4-206ENST00000454852 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.54
TRAF4-206ENST00000454852 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
TRAF4-206ENST00000454852 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
TRAF4-206ENST00000454852 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
TRAF4-206ENST00000454852 SEC61GP60059 68 aa5.35□□□□□ -1.55
TRAF4-206ENST00000454852 Q1T7F1 81 aa5.35□□□□□ -1.55
TRAF4-206ENST00000454852 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
TRAF4-206ENST00000454852 V9GYY9 64 aa5.34□□□□□ -1.55
TRAF4-206ENST00000454852 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
TRAF4-206ENST00000454852 H0YAA0 97 aa5.31□□□□□ -1.56
TRAF4-206ENST00000454852 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
TRAF4-206ENST00000454852 MT2AP02795 61 aa5.29□□□□□ -1.56
TRAF4-206ENST00000454852 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
TRAF4-206ENST00000454852 MT1FP04733 61 aa5.24□□□□□ -1.57
TRAF4-206ENST00000454852 PSPHP1O15172 72 aa5.22□□□□□ -1.57
TRAF4-206ENST00000454852 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
TRAF4-206ENST00000454852 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
TRAF4-206ENST00000454852 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
TRAF4-206ENST00000454852 Q5VV11 94 aa5.18□□□□□ -1.58
TRAF4-206ENST00000454852 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
TRAF4-206ENST00000454852 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
TRAF4-206ENST00000454852 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
TRAF4-206ENST00000454852 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
TRAF4-206ENST00000454852 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
TRAF4-206ENST00000454852 A0A1B0GU69 56 aa5.14□□□□□ -1.59
TRAF4-206ENST00000454852 P0C880 135 aa5.12□□□□□ -1.59
TRAF4-206ENST00000454852 SPRR2GQ9BYE4 73 aa5.1□□□□□ -1.59
TRAF4-206ENST00000454852 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
TRAF4-206ENST00000454852 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
TRAF4-206ENST00000454852 A6NED7 52 aa5.07□□□□□ -1.6
TRAF4-206ENST00000454852 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
TRAF4-206ENST00000454852 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
TRAF4-206ENST00000454852 M0QZ58 72 aa5.03□□□□□ -1.6
TRAF4-206ENST00000454852 LCE2BO14633 110 aa5.03□□□□□ -1.6
TRAF4-206ENST00000454852 USH2AO75445 5202 aa5.03□□□□□ -1.6
TRAF4-206ENST00000454852 R4GN34 69 aa5.02□□□□□ -1.61
TRAF4-206ENST00000454852 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
TRAF4-206ENST00000454852 UQCR11O14957 56 aa5□□□□□ -1.61
TRAF4-206ENST00000454852 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
TRAF4-206ENST00000454852 A0A1B0GU33 70 aa4.97□□□□□ -1.61
TRAF4-206ENST00000454852 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
TRAF4-206ENST00000454852 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
TRAF4-206ENST00000454852 A8MU10 97 aa4.94□□□□□ -1.62
TRAF4-206ENST00000454852 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
TRAF4-206ENST00000454852 MT1BP07438 61 aa4.93□□□□□ -1.62
TRAF4-206ENST00000454852 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
TRAF4-206ENST00000454852 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
TRAF4-206ENST00000454852 A6NN06 94 aa4.91□□□□□ -1.62
TRAF4-206ENST00000454852 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
TRAF4-206ENST00000454852 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
TRAF4-206ENST00000454852 LINC01554Q52M75 96 aa4.84□□□□□ -1.63
TRAF4-206ENST00000454852 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
TRAF4-206ENST00000454852 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
TRAF4-206ENST00000454852 A0A0D9SG42 100 aa4.76□□□□□ -1.65
TRAF4-206ENST00000454852 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
TRAF4-206ENST00000454852 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
TRAF4-206ENST00000454852 K7ERS5 55 aa4.73□□□□□ -1.65
TRAF4-206ENST00000454852 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
TRAF4-206ENST00000454852 MT1XP80297 61 aa4.71□□□□□ -1.66
TRAF4-206ENST00000454852 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
TRAF4-206ENST00000454852 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
TRAF4-206ENST00000454852 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
TRAF4-206ENST00000454852 H3BS24 57 aa4.68□□□□□ -1.66
TRAF4-206ENST00000454852 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
TRAF4-206ENST00000454852 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
TRAF4-206ENST00000454852 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
TRAF4-206ENST00000454852 ROMO1P60602 79 aa4.54□□□□□ -1.68
TRAF4-206ENST00000454852 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
TRAF4-206ENST00000454852 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
TRAF4-206ENST00000454852 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
TRAF4-206ENST00000454852 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
TRAF4-206ENST00000454852 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
TRAF4-206ENST00000454852 TNP1P09430 55 aa4.42□□□□□ -1.7
TRAF4-206ENST00000454852 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
TRAF4-206ENST00000454852 KMT2DO14686 5537 aa4.39□□□□□ -1.71
TRAF4-206ENST00000454852 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
TRAF4-206ENST00000454852 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
TRAF4-206ENST00000454852 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
TRAF4-206ENST00000454852 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
TRAF4-206ENST00000454852 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
TRAF4-206ENST00000454852 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
TRAF4-206ENST00000454852 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
TRAF4-206ENST00000454852 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
TRAF4-206ENST00000454852 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
TRAF4-206ENST00000454852 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
TRAF4-206ENST00000454852 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
TRAF4-206ENST00000454852 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
TRAF4-206ENST00000454852 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
TRAF4-206ENST00000454852 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
TRAF4-206ENST00000454852 MT1EP04732 61 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms