RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
MSH6-205ENST00000454137 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
MSH6-205ENST00000454137 FLG2Q5D862 2391 aaPredicted RBP3.4□□□□□ -1.87
MSH6-205ENST00000454137 HRES1P13985 223 aa3.39□□□□□ -1.87
MSH6-205ENST00000454137 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
MSH6-205ENST00000454137 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
MSH6-205ENST00000454137 Q5W150 140 aa3.38□□□□□ -1.87
MSH6-205ENST00000454137 IGKV2D-30A0A075B6S6 120 aa3.37□□□□□ -1.87
MSH6-205ENST00000454137 A6NED7 52 aa3.37□□□□□ -1.87
MSH6-205ENST00000454137 LINC00313P59037 77 aa3.37□□□□□ -1.87
MSH6-205ENST00000454137 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
MSH6-205ENST00000454137 TNXBP22105 4242 aa3.37□□□□□ -1.87
MSH6-205ENST00000454137 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
MSH6-205ENST00000454137 ACYP2P14621 99 aa3.36□□□□□ -1.87
MSH6-205ENST00000454137 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
MSH6-205ENST00000454137 DMAC1Q96GE9 116 aa3.36□□□□□ -1.87
MSH6-205ENST00000454137 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
MSH6-205ENST00000454137 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
MSH6-205ENST00000454137 ATP11AUNQ6ZP68 121 aa3.35□□□□□ -1.87
MSH6-205ENST00000454137 KRTAP16-1A8MUX0 517 aa3.34□□□□□ -1.87
MSH6-205ENST00000454137 LCA10Q71F78 164 aa3.34□□□□□ -1.87
MSH6-205ENST00000454137 DMBT1Q9UGM3 2413 aaPredicted RBP3.33□□□□□ -1.88
MSH6-205ENST00000454137 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
MSH6-205ENST00000454137 MYCBP2O75592 4640 aa3.33□□□□□ -1.88
MSH6-205ENST00000454137 A8MU10 97 aa3.32□□□□□ -1.88
MSH6-205ENST00000454137 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
MSH6-205ENST00000454137 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
MSH6-205ENST00000454137 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
MSH6-205ENST00000454137 A6NN06 94 aa3.3□□□□□ -1.88
MSH6-205ENST00000454137 A8MUU9 505 aa3.3□□□□□ -1.88
MSH6-205ENST00000454137 SPINK7P58062 85 aa3.3□□□□□ -1.88
MSH6-205ENST00000454137 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
MSH6-205ENST00000454137 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
MSH6-205ENST00000454137 RETNLBQ9BQ08 111 aa3.3□□□□□ -1.88
MSH6-205ENST00000454137 C9orf92A6NGG3 77 aa3.27□□□□□ -1.89
MSH6-205ENST00000454137 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
MSH6-205ENST00000454137 A0A1B0GU69 56 aa3.26□□□□□ -1.89
MSH6-205ENST00000454137 C7orf65Q6ZTY9 151 aa3.26□□□□□ -1.89
MSH6-205ENST00000454137 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
MSH6-205ENST00000454137 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
MSH6-205ENST00000454137 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
MSH6-205ENST00000454137 UQCR11O14957 56 aa3.21□□□□□ -1.9
MSH6-205ENST00000454137 MIR22HGQ0VDD5 57 aa3.2□□□□□ -1.9
MSH6-205ENST00000454137 HERC1Q15751 4861 aa3.2□□□□□ -1.9
MSH6-205ENST00000454137 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
MSH6-205ENST00000454137 RBM12B-AS1Q9P1G2 102 aa3.18□□□□□ -1.9
MSH6-205ENST00000454137 LRP2P98164 4655 aa3.12□□□□□ -1.91
MSH6-205ENST00000454137 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
MSH6-205ENST00000454137 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
MSH6-205ENST00000454137 A0A1B0GU33 70 aa3.09□□□□□ -1.91
MSH6-205ENST00000454137 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.91
MSH6-205ENST00000454137 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.92
MSH6-205ENST00000454137 LPAP08519 4548 aa3.08□□□□□ -1.92
MSH6-205ENST00000454137 H0YAA0 97 aa3.08□□□□□ -1.92
MSH6-205ENST00000454137 MT3P25713 68 aa3.08□□□□□ -1.92
MSH6-205ENST00000454137 UBR4Q5T4S7 5183 aa3.08□□□□□ -1.92
MSH6-205ENST00000454137 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
MSH6-205ENST00000454137 ADM2Q7Z4H4 148 aa3.07□□□□□ -1.92
MSH6-205ENST00000454137 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
MSH6-205ENST00000454137 LINC01554Q52M75 96 aa3.04□□□□□ -1.92
MSH6-205ENST00000454137 K7ERS5 55 aa3.03□□□□□ -1.92
MSH6-205ENST00000454137 CSAG1Q6PB30 78 aa3.02□□□□□ -1.93
MSH6-205ENST00000454137 KRTAP4-1Q9BYQ7 146 aa3.01□□□□□ -1.93
MSH6-205ENST00000454137 S4R3F8 94 aa2.99□□□□□ -1.93
MSH6-205ENST00000454137 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
MSH6-205ENST00000454137 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
MSH6-205ENST00000454137 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
MSH6-205ENST00000454137 RNF213Q63HN8 5207 aa2.96□□□□□ -1.94
MSH6-205ENST00000454137 ROMO1P60602 79 aa2.94□□□□□ -1.94
MSH6-205ENST00000454137 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
MSH6-205ENST00000454137 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
MSH6-205ENST00000454137 KRTAP9-8Q9BYQ0 159 aa2.91□□□□□ -1.94
MSH6-205ENST00000454137 A0A0D9SG42 100 aa2.9□□□□□ -1.95
MSH6-205ENST00000454137 MUC2Q02817 5179 aa2.9□□□□□ -1.95
MSH6-205ENST00000454137 P0C880 135 aa2.89□□□□□ -1.95
MSH6-205ENST00000454137 M0QZ58 72 aa2.87□□□□□ -1.95
MSH6-205ENST00000454137 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
MSH6-205ENST00000454137 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
MSH6-205ENST00000454137 MT1HP80294 61 aa2.83□□□□□ -1.96
MSH6-205ENST00000454137 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
MSH6-205ENST00000454137 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
MSH6-205ENST00000454137 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
MSH6-205ENST00000454137 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
MSH6-205ENST00000454137 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
MSH6-205ENST00000454137 M0R2T5 61 aa2.77□□□□□ -1.97
MSH6-205ENST00000454137 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
MSH6-205ENST00000454137 R4GN34 69 aa2.75□□□□□ -1.97
MSH6-205ENST00000454137 MT2AP02795 61 aa2.72□□□□□ -1.97
MSH6-205ENST00000454137 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
MSH6-205ENST00000454137 MT1FP04733 61 aa2.69□□□□□ -1.98
MSH6-205ENST00000454137 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
MSH6-205ENST00000454137 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
MSH6-205ENST00000454137 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
MSH6-205ENST00000454137 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
MSH6-205ENST00000454137 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
MSH6-205ENST00000454137 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
MSH6-205ENST00000454137 CRCT1Q9UGL9 99 aa2.61□□□□□ -1.99
MSH6-205ENST00000454137 PLAC4Q8WY50 150 aa2.59□□□□□ -1.99
MSH6-205ENST00000454137 KRTAP10-12P60413 245 aa2.57□□□□□ -2
MSH6-205ENST00000454137 MT1BP07438 61 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms