RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
CNOT4-207ENST00000451834 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
CNOT4-207ENST00000451834 TP53AIP1Q9HCN2 124 aa4.5□□□□□ -1.69
CNOT4-207ENST00000451834 ACYP2P14621 99 aa4.49□□□□□ -1.69
CNOT4-207ENST00000451834 SPRR1BP22528 89 aa4.49□□□□□ -1.69
CNOT4-207ENST00000451834 MRPL34Q9BQ48 92 aaKnown RBP4.49□□□□□ -1.69
CNOT4-207ENST00000451834 UQCR11O14957 56 aa4.49□□□□□ -1.69
CNOT4-207ENST00000451834 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
CNOT4-207ENST00000451834 SPINK1P00995 79 aa4.47□□□□□ -1.69
CNOT4-207ENST00000451834 DMBT1Q9UGM3 2413 aaPredicted RBP4.47□□□□□ -1.69
CNOT4-207ENST00000451834 KRTAP13-2Q52LG2 175 aa4.47□□□□□ -1.69
CNOT4-207ENST00000451834 FAT4Q6V0I7 4981 aa4.44□□□□□ -1.7
CNOT4-207ENST00000451834 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
CNOT4-207ENST00000451834 XP32Q5T750 250 aa4.43□□□□□ -1.7
CNOT4-207ENST00000451834 LPAP08519 4548 aa4.43□□□□□ -1.7
CNOT4-207ENST00000451834 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
CNOT4-207ENST00000451834 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.7
CNOT4-207ENST00000451834 A8MUU9 505 aa4.4□□□□□ -1.71
CNOT4-207ENST00000451834 LRP2P98164 4655 aa4.39□□□□□ -1.71
CNOT4-207ENST00000451834 KRTAP19-2Q3LHN2 52 aa4.39□□□□□ -1.71
CNOT4-207ENST00000451834 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
CNOT4-207ENST00000451834 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
CNOT4-207ENST00000451834 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
CNOT4-207ENST00000451834 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
CNOT4-207ENST00000451834 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
CNOT4-207ENST00000451834 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
CNOT4-207ENST00000451834 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
CNOT4-207ENST00000451834 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
CNOT4-207ENST00000451834 H0YAA0 97 aa4.35□□□□□ -1.71
CNOT4-207ENST00000451834 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
CNOT4-207ENST00000451834 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
CNOT4-207ENST00000451834 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
CNOT4-207ENST00000451834 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
CNOT4-207ENST00000451834 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
CNOT4-207ENST00000451834 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
CNOT4-207ENST00000451834 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
CNOT4-207ENST00000451834 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
CNOT4-207ENST00000451834 A0A1B0GU33 70 aa4.22□□□□□ -1.73
CNOT4-207ENST00000451834 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
CNOT4-207ENST00000451834 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
CNOT4-207ENST00000451834 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
CNOT4-207ENST00000451834 A0A0D9SG42 100 aa4.17□□□□□ -1.74
CNOT4-207ENST00000451834 MT1HP80294 61 aa4.16□□□□□ -1.74
CNOT4-207ENST00000451834 RPL37P61927 97 aaKnown RBP4.16□□□□□ -1.74
CNOT4-207ENST00000451834 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
CNOT4-207ENST00000451834 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
CNOT4-207ENST00000451834 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
CNOT4-207ENST00000451834 K7ERS5 55 aa4.1□□□□□ -1.75
CNOT4-207ENST00000451834 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
CNOT4-207ENST00000451834 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
CNOT4-207ENST00000451834 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
CNOT4-207ENST00000451834 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
CNOT4-207ENST00000451834 MUC2Q02817 5179 aa4.04□□□□□ -1.76
CNOT4-207ENST00000451834 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
CNOT4-207ENST00000451834 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
CNOT4-207ENST00000451834 S4R3F8 94 aa3.91□□□□□ -1.78
CNOT4-207ENST00000451834 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
CNOT4-207ENST00000451834 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-207ENST00000451834 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
CNOT4-207ENST00000451834 KRTAP3-2Q9BYR7 98 aa3.88□□□□□ -1.79
CNOT4-207ENST00000451834 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
CNOT4-207ENST00000451834 KRTAP3-3Q9BYR6 98 aa3.86□□□□□ -1.79
CNOT4-207ENST00000451834 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
CNOT4-207ENST00000451834 MT2AP02795 61 aa3.85□□□□□ -1.79
CNOT4-207ENST00000451834 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
CNOT4-207ENST00000451834 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
CNOT4-207ENST00000451834 USH2AO75445 5202 aa3.78□□□□□ -1.8
CNOT4-207ENST00000451834 LCE2BO14633 110 aa3.77□□□□□ -1.81
CNOT4-207ENST00000451834 MT1FP04733 61 aa3.77□□□□□ -1.81
CNOT4-207ENST00000451834 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
CNOT4-207ENST00000451834 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
CNOT4-207ENST00000451834 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
CNOT4-207ENST00000451834 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
CNOT4-207ENST00000451834 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
CNOT4-207ENST00000451834 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
CNOT4-207ENST00000451834 M0QZ58 72 aa3.61□□□□□ -1.83
CNOT4-207ENST00000451834 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-207ENST00000451834 PRO2289Q9P1D8 64 aa3.58□□□□□ -1.84
CNOT4-207ENST00000451834 MT1BP07438 61 aa3.55□□□□□ -1.84
CNOT4-207ENST00000451834 M0R2T5 61 aa3.55□□□□□ -1.84
CNOT4-207ENST00000451834 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
CNOT4-207ENST00000451834 R4GN34 69 aa3.54□□□□□ -1.84
CNOT4-207ENST00000451834 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
CNOT4-207ENST00000451834 NEBP20929 6669 aa3.44□□□□□ -1.86
CNOT4-207ENST00000451834 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
CNOT4-207ENST00000451834 KRTAP2-3P0C7H8 128 aa3.36□□□□□ -1.87
CNOT4-207ENST00000451834 KRTAP2-4Q9BYR9 128 aa3.36□□□□□ -1.87
CNOT4-207ENST00000451834 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
CNOT4-207ENST00000451834 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
CNOT4-207ENST00000451834 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
CNOT4-207ENST00000451834 INE1O15225 51 aa3.32□□□□□ -1.88
CNOT4-207ENST00000451834 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
CNOT4-207ENST00000451834 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
CNOT4-207ENST00000451834 MT1XP80297 61 aa3.29□□□□□ -1.88
CNOT4-207ENST00000451834 KRTAP23-1A1A580 65 aa3.27□□□□□ -1.89
CNOT4-207ENST00000451834 TNP1P09430 55 aa3.26□□□□□ -1.89
CNOT4-207ENST00000451834 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
CNOT4-207ENST00000451834 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
CNOT4-207ENST00000451834 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
CNOT4-207ENST00000451834 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms