RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 Q8N1X5 172 aa8.34□□□□□ -1.07
CCHCR1-208ENST00000451521 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
CCHCR1-208ENST00000451521 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
CCHCR1-208ENST00000451521 A8MUU9 505 aa8.33□□□□□ -1.08
CCHCR1-208ENST00000451521 FAT3Q8TDW7 4589 aa8.31□□□□□ -1.08
CCHCR1-208ENST00000451521 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
CCHCR1-208ENST00000451521 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
CCHCR1-208ENST00000451521 CRIPTQ9P021 101 aa8.21□□□□□ -1.09
CCHCR1-208ENST00000451521 H0YAA0 97 aa8.2□□□□□ -1.1
CCHCR1-208ENST00000451521 P0C880 135 aa8.2□□□□□ -1.1
CCHCR1-208ENST00000451521 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
CCHCR1-208ENST00000451521 HERC2O95714 4834 aa8.11□□□□□ -1.11
CCHCR1-208ENST00000451521 BIRC6Q9NR09 4857 aa8.11□□□□□ -1.11
CCHCR1-208ENST00000451521 A0A1B0GU33 70 aa8.07□□□□□ -1.12
CCHCR1-208ENST00000451521 LPAP08519 4548 aa8.05□□□□□ -1.12
CCHCR1-208ENST00000451521 RPL37P61927 97 aaKnown RBP8.05□□□□□ -1.12
CCHCR1-208ENST00000451521 XP32Q5T750 250 aa8.04□□□□□ -1.12
CCHCR1-208ENST00000451521 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
CCHCR1-208ENST00000451521 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
CCHCR1-208ENST00000451521 PCLOQ9Y6V0 5065 aa8.01□□□□□ -1.13
CCHCR1-208ENST00000451521 LRP2P98164 4655 aa7.97□□□□□ -1.13
CCHCR1-208ENST00000451521 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
CCHCR1-208ENST00000451521 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
CCHCR1-208ENST00000451521 K7ERS5 55 aa7.91□□□□□ -1.14
CCHCR1-208ENST00000451521 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
CCHCR1-208ENST00000451521 NDUFAF8A1L188 74 aa7.9□□□□□ -1.15
CCHCR1-208ENST00000451521 J3QL48 77 aa7.88□□□□□ -1.15
CCHCR1-208ENST00000451521 HERC1Q15751 4861 aa7.87□□□□□ -1.15
CCHCR1-208ENST00000451521 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
CCHCR1-208ENST00000451521 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
CCHCR1-208ENST00000451521 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
CCHCR1-208ENST00000451521 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
CCHCR1-208ENST00000451521 MUC2Q02817 5179 aa7.71□□□□□ -1.18
CCHCR1-208ENST00000451521 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
CCHCR1-208ENST00000451521 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
CCHCR1-208ENST00000451521 A0A0D9SG42 100 aa7.67□□□□□ -1.18
CCHCR1-208ENST00000451521 S4R3F8 94 aa7.66□□□□□ -1.18
CCHCR1-208ENST00000451521 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
CCHCR1-208ENST00000451521 SEC61BP60468 96 aaKnown RBP7.6□□□□□ -1.19
CCHCR1-208ENST00000451521 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
CCHCR1-208ENST00000451521 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
CCHCR1-208ENST00000451521 MUC17Q685J3 4493 aa7.52□□□□□ -1.21
CCHCR1-208ENST00000451521 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
CCHCR1-208ENST00000451521 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
CCHCR1-208ENST00000451521 KRTAP12-2P59991 146 aa7.46□□□□□ -1.21
CCHCR1-208ENST00000451521 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
CCHCR1-208ENST00000451521 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
CCHCR1-208ENST00000451521 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
CCHCR1-208ENST00000451521 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
CCHCR1-208ENST00000451521 M0QZ58 72 aa7.22□□□□□ -1.25
CCHCR1-208ENST00000451521 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
CCHCR1-208ENST00000451521 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
CCHCR1-208ENST00000451521 R4GN34 69 aa7.07□□□□□ -1.28
CCHCR1-208ENST00000451521 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
CCHCR1-208ENST00000451521 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
CCHCR1-208ENST00000451521 M0R2T5 61 aa6.89□□□□□ -1.31
CCHCR1-208ENST00000451521 MT1HP80294 61 aa6.88□□□□□ -1.31
CCHCR1-208ENST00000451521 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
CCHCR1-208ENST00000451521 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
CCHCR1-208ENST00000451521 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
CCHCR1-208ENST00000451521 MT1FP04733 61 aa6.65□□□□□ -1.34
CCHCR1-208ENST00000451521 MT2AP02795 61 aa6.65□□□□□ -1.34
CCHCR1-208ENST00000451521 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
CCHCR1-208ENST00000451521 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
CCHCR1-208ENST00000451521 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
CCHCR1-208ENST00000451521 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
CCHCR1-208ENST00000451521 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
CCHCR1-208ENST00000451521 USH2AO75445 5202 aa6.47□□□□□ -1.37
CCHCR1-208ENST00000451521 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
CCHCR1-208ENST00000451521 TNP1P09430 55 aa6.44□□□□□ -1.38
CCHCR1-208ENST00000451521 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
CCHCR1-208ENST00000451521 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
CCHCR1-208ENST00000451521 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
CCHCR1-208ENST00000451521 MT1BP07438 61 aa6.36□□□□□ -1.39
CCHCR1-208ENST00000451521 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
CCHCR1-208ENST00000451521 LCE2BO14633 110 aa6.27□□□□□ -1.41
CCHCR1-208ENST00000451521 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
CCHCR1-208ENST00000451521 MT1XP80297 61 aa6.23□□□□□ -1.41
CCHCR1-208ENST00000451521 INE1O15225 51 aa6.16□□□□□ -1.42
CCHCR1-208ENST00000451521 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
CCHCR1-208ENST00000451521 KMT2DO14686 5537 aa6.05□□□□□ -1.44
CCHCR1-208ENST00000451521 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
CCHCR1-208ENST00000451521 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
CCHCR1-208ENST00000451521 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
CCHCR1-208ENST00000451521 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
CCHCR1-208ENST00000451521 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
CCHCR1-208ENST00000451521 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
CCHCR1-208ENST00000451521 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
CCHCR1-208ENST00000451521 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
CCHCR1-208ENST00000451521 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
CCHCR1-208ENST00000451521 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
CCHCR1-208ENST00000451521 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
CCHCR1-208ENST00000451521 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
CCHCR1-208ENST00000451521 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
CCHCR1-208ENST00000451521 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
CCHCR1-208ENST00000451521 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
CCHCR1-208ENST00000451521 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
CCHCR1-208ENST00000451521 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
CCHCR1-208ENST00000451521 MT1EP04732 61 aa5.43□□□□□ -1.54
CCHCR1-208ENST00000451521 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms