RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 UQCR11O14957 56 aa3.69□□□□□ -1.82
USP46-202ENST00000451218 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
USP46-202ENST00000451218 C8orf17Q9NRJ1 99 aa3.68□□□□□ -1.82
USP46-202ENST00000451218 Q5W150 140 aa3.67□□□□□ -1.82
USP46-202ENST00000451218 KRTAP10-8P60410 259 aa3.67□□□□□ -1.82
USP46-202ENST00000451218 KRTAP4-5Q9BYR2 181 aa3.67□□□□□ -1.82
USP46-202ENST00000451218 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
USP46-202ENST00000451218 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
USP46-202ENST00000451218 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
USP46-202ENST00000451218 LCA10Q71F78 164 aa3.66□□□□□ -1.82
USP46-202ENST00000451218 Q8N9P0 234 aaPredicted RBP3.66□□□□□ -1.82
USP46-202ENST00000451218 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
USP46-202ENST00000451218 PCOTHQ58A44 107 aa3.64□□□□□ -1.83
USP46-202ENST00000451218 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
USP46-202ENST00000451218 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
USP46-202ENST00000451218 PSPHP1O15172 72 aa3.63□□□□□ -1.83
USP46-202ENST00000451218 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
USP46-202ENST00000451218 HERC1Q15751 4861 aa3.62□□□□□ -1.83
USP46-202ENST00000451218 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
USP46-202ENST00000451218 Q5VSD8 79 aa3.6□□□□□ -1.83
USP46-202ENST00000451218 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
USP46-202ENST00000451218 FLGP20930 4061 aaPredicted RBP3.58□□□□□ -1.84
USP46-202ENST00000451218 MUC2Q02817 5179 aa3.57□□□□□ -1.84
USP46-202ENST00000451218 C20orf166-AS1Q96NR2 134 aa3.56□□□□□ -1.84
USP46-202ENST00000451218 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
USP46-202ENST00000451218 A8MUU9 505 aa3.55□□□□□ -1.84
USP46-202ENST00000451218 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
USP46-202ENST00000451218 A8MU10 97 aa3.54□□□□□ -1.84
USP46-202ENST00000451218 R4GN34 69 aa3.54□□□□□ -1.84
USP46-202ENST00000451218 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
USP46-202ENST00000451218 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
USP46-202ENST00000451218 S4R3F8 94 aa3.51□□□□□ -1.85
USP46-202ENST00000451218 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
USP46-202ENST00000451218 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
USP46-202ENST00000451218 Q1T7F1 81 aa3.49□□□□□ -1.85
USP46-202ENST00000451218 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.86
USP46-202ENST00000451218 A0A1B0GU33 70 aa3.43□□□□□ -1.86
USP46-202ENST00000451218 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
USP46-202ENST00000451218 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
USP46-202ENST00000451218 COA5Q86WW8 74 aa3.42□□□□□ -1.86
USP46-202ENST00000451218 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
USP46-202ENST00000451218 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
USP46-202ENST00000451218 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
USP46-202ENST00000451218 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
USP46-202ENST00000451218 M0QZ58 72 aa3.39□□□□□ -1.87
USP46-202ENST00000451218 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
USP46-202ENST00000451218 A6NN06 94 aa3.38□□□□□ -1.87
USP46-202ENST00000451218 DMBT1Q9UGM3 2413 aaPredicted RBP3.37□□□□□ -1.87
USP46-202ENST00000451218 Q5VV11 94 aa3.37□□□□□ -1.87
USP46-202ENST00000451218 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
USP46-202ENST00000451218 SPINK7P58062 85 aa3.35□□□□□ -1.87
USP46-202ENST00000451218 A0A0D9SG42 100 aa3.33□□□□□ -1.88
USP46-202ENST00000451218 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
USP46-202ENST00000451218 TNP1P09430 55 aa3.3□□□□□ -1.88
USP46-202ENST00000451218 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
USP46-202ENST00000451218 P0C880 135 aa3.28□□□□□ -1.88
USP46-202ENST00000451218 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
USP46-202ENST00000451218 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
USP46-202ENST00000451218 ROMO1P60602 79 aa3.23□□□□□ -1.89
USP46-202ENST00000451218 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
USP46-202ENST00000451218 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
USP46-202ENST00000451218 SPATA8Q6RVD6 105 aa3.2□□□□□ -1.9
USP46-202ENST00000451218 H0YAA0 97 aa3.19□□□□□ -1.9
USP46-202ENST00000451218 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
USP46-202ENST00000451218 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
USP46-202ENST00000451218 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
USP46-202ENST00000451218 MT1HP80294 61 aa3.08□□□□□ -1.92
USP46-202ENST00000451218 KRTAP10-10P60014 251 aa3.07□□□□□ -1.92
USP46-202ENST00000451218 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
USP46-202ENST00000451218 KRTAP9-8Q9BYQ0 159 aa3.04□□□□□ -1.92
USP46-202ENST00000451218 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
USP46-202ENST00000451218 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
USP46-202ENST00000451218 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
USP46-202ENST00000451218 KRTAP12-1P59990 96 aa3□□□□□ -1.93
USP46-202ENST00000451218 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
USP46-202ENST00000451218 MT1FP04733 61 aa2.98□□□□□ -1.93
USP46-202ENST00000451218 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
USP46-202ENST00000451218 MT2AP02795 61 aa2.96□□□□□ -1.94
USP46-202ENST00000451218 KRTAP9-2Q9BYQ4 174 aa2.95□□□□□ -1.94
USP46-202ENST00000451218 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
USP46-202ENST00000451218 USH2AO75445 5202 aa2.93□□□□□ -1.94
USP46-202ENST00000451218 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
USP46-202ENST00000451218 MT3P25713 68 aa2.92□□□□□ -1.94
USP46-202ENST00000451218 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
USP46-202ENST00000451218 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.94
USP46-202ENST00000451218 MT1BP07438 61 aa2.87□□□□□ -1.95
USP46-202ENST00000451218 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
USP46-202ENST00000451218 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
USP46-202ENST00000451218 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
USP46-202ENST00000451218 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
USP46-202ENST00000451218 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
USP46-202ENST00000451218 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
USP46-202ENST00000451218 MT1XP80297 61 aa2.79□□□□□ -1.96
USP46-202ENST00000451218 KMT2DO14686 5537 aa2.78□□□□□ -1.96
USP46-202ENST00000451218 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.97
USP46-202ENST00000451218 KRTAP4-8A0A0G2JLE6 195 aa2.69□□□□□ -1.98
USP46-202ENST00000451218 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
USP46-202ENST00000451218 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
USP46-202ENST00000451218 INE1O15225 51 aa2.62□□□□□ -1.99
USP46-202ENST00000451218 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms