RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
RAB11FIP3-205ENST00000450428 RYR3Q15413 4870 aa6.38□□□□□ -1.39
RAB11FIP3-205ENST00000450428 RYR2Q92736 4967 aa6.37□□□□□ -1.39
RAB11FIP3-205ENST00000450428 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
RAB11FIP3-205ENST00000450428 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
RAB11FIP3-205ENST00000450428 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
RAB11FIP3-205ENST00000450428 Q5VSD8 79 aa6.31□□□□□ -1.4
RAB11FIP3-205ENST00000450428 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
RAB11FIP3-205ENST00000450428 KIAA1109Q2LD37 5005 aa6.28□□□□□ -1.4
RAB11FIP3-205ENST00000450428 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
RAB11FIP3-205ENST00000450428 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
RAB11FIP3-205ENST00000450428 EPPK1P58107 5090 aaKnown RBP6.23□□□□□ -1.41
RAB11FIP3-205ENST00000450428 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
RAB11FIP3-205ENST00000450428 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
RAB11FIP3-205ENST00000450428 S4R3F8 94 aa6.21□□□□□ -1.42
RAB11FIP3-205ENST00000450428 MYCBP2O75592 4640 aa6.21□□□□□ -1.42
RAB11FIP3-205ENST00000450428 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
RAB11FIP3-205ENST00000450428 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
RAB11FIP3-205ENST00000450428 HSPG2P98160 4391 aa6.13□□□□□ -1.43
RAB11FIP3-205ENST00000450428 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
RAB11FIP3-205ENST00000450428 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
RAB11FIP3-205ENST00000450428 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
RAB11FIP3-205ENST00000450428 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
RAB11FIP3-205ENST00000450428 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
RAB11FIP3-205ENST00000450428 RYR1P21817 5038 aa6.08□□□□□ -1.44
RAB11FIP3-205ENST00000450428 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
RAB11FIP3-205ENST00000450428 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
RAB11FIP3-205ENST00000450428 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
RAB11FIP3-205ENST00000450428 LUZP6Q538Z0 58 aa6□□□□□ -1.45
RAB11FIP3-205ENST00000450428 TNXBP22105 4242 aa6□□□□□ -1.45
RAB11FIP3-205ENST00000450428 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
RAB11FIP3-205ENST00000450428 XP32Q5T750 250 aa5.99□□□□□ -1.45
RAB11FIP3-205ENST00000450428 J3QL48 77 aa5.95□□□□□ -1.46
RAB11FIP3-205ENST00000450428 LPAP08519 4548 aa5.93□□□□□ -1.46
RAB11FIP3-205ENST00000450428 M0QZ58 72 aa5.92□□□□□ -1.46
RAB11FIP3-205ENST00000450428 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
RAB11FIP3-205ENST00000450428 LRP2P98164 4655 aa5.87□□□□□ -1.47
RAB11FIP3-205ENST00000450428 HERC2O95714 4834 aa5.87□□□□□ -1.47
RAB11FIP3-205ENST00000450428 ABCA13Q86UQ4 5058 aa5.87□□□□□ -1.47
RAB11FIP3-205ENST00000450428 R4GN34 69 aa5.84□□□□□ -1.47
RAB11FIP3-205ENST00000450428 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
RAB11FIP3-205ENST00000450428 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
RAB11FIP3-205ENST00000450428 HERC1Q15751 4861 aa5.75□□□□□ -1.49
RAB11FIP3-205ENST00000450428 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
RAB11FIP3-205ENST00000450428 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
RAB11FIP3-205ENST00000450428 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
RAB11FIP3-205ENST00000450428 MUC2Q02817 5179 aa5.65□□□□□ -1.5
RAB11FIP3-205ENST00000450428 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
RAB11FIP3-205ENST00000450428 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
RAB11FIP3-205ENST00000450428 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
RAB11FIP3-205ENST00000450428 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
RAB11FIP3-205ENST00000450428 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
RAB11FIP3-205ENST00000450428 TNP1P09430 55 aa5.33□□□□□ -1.56
RAB11FIP3-205ENST00000450428 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
RAB11FIP3-205ENST00000450428 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
RAB11FIP3-205ENST00000450428 M0R2T5 61 aa5.28□□□□□ -1.56
RAB11FIP3-205ENST00000450428 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
RAB11FIP3-205ENST00000450428 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
RAB11FIP3-205ENST00000450428 LCE2CQ5TA81 110 aa5.1□□□□□ -1.59
RAB11FIP3-205ENST00000450428 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
RAB11FIP3-205ENST00000450428 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
RAB11FIP3-205ENST00000450428 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
RAB11FIP3-205ENST00000450428 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
RAB11FIP3-205ENST00000450428 MT1HP80294 61 aa5.04□□□□□ -1.6
RAB11FIP3-205ENST00000450428 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
RAB11FIP3-205ENST00000450428 MT1FP04733 61 aa4.91□□□□□ -1.62
RAB11FIP3-205ENST00000450428 MT2AP02795 61 aa4.91□□□□□ -1.62
RAB11FIP3-205ENST00000450428 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
RAB11FIP3-205ENST00000450428 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
RAB11FIP3-205ENST00000450428 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
RAB11FIP3-205ENST00000450428 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
RAB11FIP3-205ENST00000450428 INE1O15225 51 aa4.84□□□□□ -1.63
RAB11FIP3-205ENST00000450428 USH2AO75445 5202 aa4.79□□□□□ -1.64
RAB11FIP3-205ENST00000450428 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
RAB11FIP3-205ENST00000450428 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
RAB11FIP3-205ENST00000450428 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
RAB11FIP3-205ENST00000450428 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
RAB11FIP3-205ENST00000450428 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
RAB11FIP3-205ENST00000450428 MT1BP07438 61 aa4.65□□□□□ -1.66
RAB11FIP3-205ENST00000450428 KMT2DO14686 5537 aa4.61□□□□□ -1.67
RAB11FIP3-205ENST00000450428 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.68
RAB11FIP3-205ENST00000450428 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
RAB11FIP3-205ENST00000450428 MT1XP80297 61 aa4.58□□□□□ -1.68
RAB11FIP3-205ENST00000450428 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
RAB11FIP3-205ENST00000450428 LCE2BO14633 110 aa4.54□□□□□ -1.68
RAB11FIP3-205ENST00000450428 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
RAB11FIP3-205ENST00000450428 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
RAB11FIP3-205ENST00000450428 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
RAB11FIP3-205ENST00000450428 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
RAB11FIP3-205ENST00000450428 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
RAB11FIP3-205ENST00000450428 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
RAB11FIP3-205ENST00000450428 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
RAB11FIP3-205ENST00000450428 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.73
RAB11FIP3-205ENST00000450428 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
RAB11FIP3-205ENST00000450428 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
RAB11FIP3-205ENST00000450428 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
RAB11FIP3-205ENST00000450428 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
RAB11FIP3-205ENST00000450428 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
RAB11FIP3-205ENST00000450428 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
RAB11FIP3-205ENST00000450428 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms