RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
LINC00954-202ENST00000449086 HERC2O95714 4834 aa4.63□□□□□ -1.67
LINC00954-202ENST00000449086 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
LINC00954-202ENST00000449086 KRTAP4-5Q9BYR2 181 aa4.59□□□□□ -1.68
LINC00954-202ENST00000449086 PKHD1L1Q86WI1 4243 aa4.56□□□□□ -1.68
LINC00954-202ENST00000449086 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
LINC00954-202ENST00000449086 FAT1Q14517 4588 aa4.55□□□□□ -1.68
LINC00954-202ENST00000449086 SSBP3-AS1Q7Z2R9 100 aa4.55□□□□□ -1.68
LINC00954-202ENST00000449086 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
LINC00954-202ENST00000449086 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
LINC00954-202ENST00000449086 DMBT1Q9UGM3 2413 aaPredicted RBP4.54□□□□□ -1.68
LINC00954-202ENST00000449086 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
LINC00954-202ENST00000449086 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
LINC00954-202ENST00000449086 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
LINC00954-202ENST00000449086 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
LINC00954-202ENST00000449086 H0YAA0 97 aa4.5□□□□□ -1.69
LINC00954-202ENST00000449086 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
LINC00954-202ENST00000449086 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
LINC00954-202ENST00000449086 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
LINC00954-202ENST00000449086 LINC00304Q8N9R0 145 aa4.49□□□□□ -1.69
LINC00954-202ENST00000449086 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
LINC00954-202ENST00000449086 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
LINC00954-202ENST00000449086 A8MUU9 505 aa4.47□□□□□ -1.69
LINC00954-202ENST00000449086 ROMO1P60602 79 aa4.47□□□□□ -1.69
LINC00954-202ENST00000449086 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
LINC00954-202ENST00000449086 A0A1B0GU33 70 aa4.47□□□□□ -1.69
LINC00954-202ENST00000449086 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
LINC00954-202ENST00000449086 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
LINC00954-202ENST00000449086 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
LINC00954-202ENST00000449086 K7ERS5 55 aa4.43□□□□□ -1.7
LINC00954-202ENST00000449086 C9orf92A6NGG3 77 aa4.41□□□□□ -1.7
LINC00954-202ENST00000449086 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.7
LINC00954-202ENST00000449086 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.71
LINC00954-202ENST00000449086 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
LINC00954-202ENST00000449086 MYCBP2O75592 4640 aa4.38□□□□□ -1.71
LINC00954-202ENST00000449086 TNXBP22105 4242 aa4.38□□□□□ -1.71
LINC00954-202ENST00000449086 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
LINC00954-202ENST00000449086 A0A0D9SG42 100 aa4.35□□□□□ -1.71
LINC00954-202ENST00000449086 P0C880 135 aa4.35□□□□□ -1.71
LINC00954-202ENST00000449086 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
LINC00954-202ENST00000449086 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
LINC00954-202ENST00000449086 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
LINC00954-202ENST00000449086 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
LINC00954-202ENST00000449086 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
LINC00954-202ENST00000449086 RPL37P61927 97 aaKnown RBP4.26□□□□□ -1.73
LINC00954-202ENST00000449086 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
LINC00954-202ENST00000449086 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
LINC00954-202ENST00000449086 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
LINC00954-202ENST00000449086 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
LINC00954-202ENST00000449086 HERC1Q15751 4861 aa4.19□□□□□ -1.74
LINC00954-202ENST00000449086 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
LINC00954-202ENST00000449086 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
LINC00954-202ENST00000449086 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
LINC00954-202ENST00000449086 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
LINC00954-202ENST00000449086 S4R3F8 94 aa4.12□□□□□ -1.75
LINC00954-202ENST00000449086 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
LINC00954-202ENST00000449086 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
LINC00954-202ENST00000449086 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
LINC00954-202ENST00000449086 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
LINC00954-202ENST00000449086 LPAP08519 4548 aa4.09□□□□□ -1.75
LINC00954-202ENST00000449086 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
LINC00954-202ENST00000449086 LRP2P98164 4655 aa4.04□□□□□ -1.76
LINC00954-202ENST00000449086 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
LINC00954-202ENST00000449086 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
LINC00954-202ENST00000449086 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
LINC00954-202ENST00000449086 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
LINC00954-202ENST00000449086 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
LINC00954-202ENST00000449086 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
LINC00954-202ENST00000449086 M0QZ58 72 aa3.92□□□□□ -1.78
LINC00954-202ENST00000449086 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
LINC00954-202ENST00000449086 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
LINC00954-202ENST00000449086 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
LINC00954-202ENST00000449086 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
LINC00954-202ENST00000449086 R4GN34 69 aa3.9□□□□□ -1.79
LINC00954-202ENST00000449086 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
LINC00954-202ENST00000449086 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
LINC00954-202ENST00000449086 MUC2Q02817 5179 aa3.82□□□□□ -1.8
LINC00954-202ENST00000449086 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
LINC00954-202ENST00000449086 MT1HP80294 61 aa3.78□□□□□ -1.8
LINC00954-202ENST00000449086 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
LINC00954-202ENST00000449086 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
LINC00954-202ENST00000449086 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
LINC00954-202ENST00000449086 M0R2T5 61 aa3.71□□□□□ -1.82
LINC00954-202ENST00000449086 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
LINC00954-202ENST00000449086 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
LINC00954-202ENST00000449086 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
LINC00954-202ENST00000449086 MT2AP02795 61 aa3.58□□□□□ -1.84
LINC00954-202ENST00000449086 TNP1P09430 55 aa3.57□□□□□ -1.84
LINC00954-202ENST00000449086 MT1FP04733 61 aa3.54□□□□□ -1.84
LINC00954-202ENST00000449086 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
LINC00954-202ENST00000449086 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
LINC00954-202ENST00000449086 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
LINC00954-202ENST00000449086 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
LINC00954-202ENST00000449086 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
LINC00954-202ENST00000449086 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
LINC00954-202ENST00000449086 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
LINC00954-202ENST00000449086 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
LINC00954-202ENST00000449086 MT1BP07438 61 aa3.32□□□□□ -1.88
LINC00954-202ENST00000449086 KRTAP19-6Q3LI70 58 aa3.31□□□□□ -1.88
LINC00954-202ENST00000449086 USH2AO75445 5202 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms