RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
APP-210ENST00000448850 MUC2Q02817 5179 aa7.48□□□□□ -1.21
APP-210ENST00000448850 HRES1P13985 223 aa7.48□□□□□ -1.21
APP-210ENST00000448850 LINC01554Q52M75 96 aa7.46□□□□□ -1.21
APP-210ENST00000448850 SNURFQ9Y675 71 aa7.46□□□□□ -1.21
APP-210ENST00000448850 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
APP-210ENST00000448850 A6NN06 94 aa7.42□□□□□ -1.22
APP-210ENST00000448850 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
APP-210ENST00000448850 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
APP-210ENST00000448850 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
APP-210ENST00000448850 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
APP-210ENST00000448850 SPANXA2-OT1Q8N9U9 137 aa7.27□□□□□ -1.25
APP-210ENST00000448850 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
APP-210ENST00000448850 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
APP-210ENST00000448850 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
APP-210ENST00000448850 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
APP-210ENST00000448850 SPTSSBQ8NFR3 76 aa7.18□□□□□ -1.26
APP-210ENST00000448850 ACYP2P14621 99 aa7.16□□□□□ -1.26
APP-210ENST00000448850 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.26
APP-210ENST00000448850 MT1HP80294 61 aa7.14□□□□□ -1.27
APP-210ENST00000448850 Q5VV11 94 aa7.13□□□□□ -1.27
APP-210ENST00000448850 S4R3F8 94 aa7.13□□□□□ -1.27
APP-210ENST00000448850 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
APP-210ENST00000448850 M0R2T5 61 aa7.06□□□□□ -1.28
APP-210ENST00000448850 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
APP-210ENST00000448850 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
APP-210ENST00000448850 COA5Q86WW8 74 aa7.04□□□□□ -1.28
APP-210ENST00000448850 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
APP-210ENST00000448850 A8MU10 97 aa7□□□□□ -1.29
APP-210ENST00000448850 A6NED7 52 aa6.98□□□□□ -1.29
APP-210ENST00000448850 KRTAP10-6P60371 365 aaPredicted RBP6.92□□□□□ -1.3
APP-210ENST00000448850 ROMO1P60602 79 aa6.9□□□□□ -1.31
APP-210ENST00000448850 PRAC1Q96KF2 57 aa6.9□□□□□ -1.31
APP-210ENST00000448850 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
APP-210ENST00000448850 PRR15LQ9BU68 103 aa6.87□□□□□ -1.31
APP-210ENST00000448850 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
APP-210ENST00000448850 H0YAA0 97 aa6.83□□□□□ -1.32
APP-210ENST00000448850 MT2AP02795 61 aa6.8□□□□□ -1.32
APP-210ENST00000448850 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
APP-210ENST00000448850 MT1FP04733 61 aa6.76□□□□□ -1.33
APP-210ENST00000448850 K7ERS5 55 aa6.75□□□□□ -1.33
APP-210ENST00000448850 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
APP-210ENST00000448850 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
APP-210ENST00000448850 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.33
APP-210ENST00000448850 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
APP-210ENST00000448850 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.33
APP-210ENST00000448850 P0C880 135 aa6.71□□□□□ -1.34
APP-210ENST00000448850 A0A1B0GU69 56 aa6.66□□□□□ -1.34
APP-210ENST00000448850 CRIPTQ9P021 101 aa6.62□□□□□ -1.35
APP-210ENST00000448850 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
APP-210ENST00000448850 R4GN34 69 aa6.57□□□□□ -1.36
APP-210ENST00000448850 A0A1B0GU33 70 aa6.55□□□□□ -1.36
APP-210ENST00000448850 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
APP-210ENST00000448850 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
APP-210ENST00000448850 M0QZ58 72 aa6.54□□□□□ -1.36
APP-210ENST00000448850 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
APP-210ENST00000448850 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
APP-210ENST00000448850 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
APP-210ENST00000448850 LCE2BO14633 110 aa6.47□□□□□ -1.37
APP-210ENST00000448850 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
APP-210ENST00000448850 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
APP-210ENST00000448850 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
APP-210ENST00000448850 UQCR11O14957 56 aa6.42□□□□□ -1.38
APP-210ENST00000448850 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
APP-210ENST00000448850 NDUFAF8A1L188 74 aa6.39□□□□□ -1.39
APP-210ENST00000448850 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
APP-210ENST00000448850 USH2AO75445 5202 aa6.35□□□□□ -1.39
APP-210ENST00000448850 A0A0D9SG42 100 aa6.34□□□□□ -1.39
APP-210ENST00000448850 MT1BP07438 61 aa6.34□□□□□ -1.39
APP-210ENST00000448850 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.4
APP-210ENST00000448850 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
APP-210ENST00000448850 FSIP2Q5CZC0 6907 aa6.23□□□□□ -1.41
APP-210ENST00000448850 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
APP-210ENST00000448850 SPINT4Q6UDR6 99 aa6.22□□□□□ -1.41
APP-210ENST00000448850 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
APP-210ENST00000448850 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
APP-210ENST00000448850 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
APP-210ENST00000448850 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
APP-210ENST00000448850 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
APP-210ENST00000448850 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
APP-210ENST00000448850 MT1XP80297 61 aa6.08□□□□□ -1.44
APP-210ENST00000448850 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
APP-210ENST00000448850 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
APP-210ENST00000448850 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
APP-210ENST00000448850 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
APP-210ENST00000448850 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
APP-210ENST00000448850 TNP1P09430 55 aa5.78□□□□□ -1.48
APP-210ENST00000448850 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
APP-210ENST00000448850 MACF1Q9UPN3 7388 aaKnown RBP5.73□□□□□ -1.49
APP-210ENST00000448850 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
APP-210ENST00000448850 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
APP-210ENST00000448850 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
APP-210ENST00000448850 KMT2DO14686 5537 aa5.65□□□□□ -1.5
APP-210ENST00000448850 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
APP-210ENST00000448850 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
APP-210ENST00000448850 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
APP-210ENST00000448850 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
APP-210ENST00000448850 INE1O15225 51 aa5.47□□□□□ -1.53
APP-210ENST00000448850 PP632Q6XCG6 107 aa5.46□□□□□ -1.53
APP-210ENST00000448850 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms