RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
SNHG4-201ENST00000448190 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
SNHG4-201ENST00000448190 H3BPC8 53 aa6.2□□□□□ -1.42
SNHG4-201ENST00000448190 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
SNHG4-201ENST00000448190 NDUFC1O43677 76 aa6.15□□□□□ -1.42
SNHG4-201ENST00000448190 A8MUN3 132 aa6.14□□□□□ -1.43
SNHG4-201ENST00000448190 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
SNHG4-201ENST00000448190 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
SNHG4-201ENST00000448190 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
SNHG4-201ENST00000448190 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
SNHG4-201ENST00000448190 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
SNHG4-201ENST00000448190 C20orf197Q8N268 126 aa6.03□□□□□ -1.44
SNHG4-201ENST00000448190 SERP2Q8N6R1 65 aa6.03□□□□□ -1.44
SNHG4-201ENST00000448190 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
SNHG4-201ENST00000448190 ACYP2P14621 99 aa5.98□□□□□ -1.45
SNHG4-201ENST00000448190 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
SNHG4-201ENST00000448190 H0YAA0 97 aa5.96□□□□□ -1.46
SNHG4-201ENST00000448190 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
SNHG4-201ENST00000448190 MT1BP07438 61 aa5.93□□□□□ -1.46
SNHG4-201ENST00000448190 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
SNHG4-201ENST00000448190 Q5VV11 94 aa5.92□□□□□ -1.46
SNHG4-201ENST00000448190 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
SNHG4-201ENST00000448190 P0C880 135 aa5.91□□□□□ -1.46
SNHG4-201ENST00000448190 COX7CP15954 63 aa5.9□□□□□ -1.46
SNHG4-201ENST00000448190 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
SNHG4-201ENST00000448190 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
SNHG4-201ENST00000448190 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
SNHG4-201ENST00000448190 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
SNHG4-201ENST00000448190 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
SNHG4-201ENST00000448190 CYSTM1Q9H1C7 97 aa5.84□□□□□ -1.47
SNHG4-201ENST00000448190 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
SNHG4-201ENST00000448190 R4GN34 69 aa5.81□□□□□ -1.48
SNHG4-201ENST00000448190 A6NN06 94 aa5.79□□□□□ -1.48
SNHG4-201ENST00000448190 M0QZ58 72 aa5.79□□□□□ -1.48
SNHG4-201ENST00000448190 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
SNHG4-201ENST00000448190 H7BZZ5 65 aa5.77□□□□□ -1.49
SNHG4-201ENST00000448190 COA5Q86WW8 74 aa5.76□□□□□ -1.49
SNHG4-201ENST00000448190 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
SNHG4-201ENST00000448190 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
SNHG4-201ENST00000448190 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
SNHG4-201ENST00000448190 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
SNHG4-201ENST00000448190 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
SNHG4-201ENST00000448190 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
SNHG4-201ENST00000448190 MT1XP80297 61 aa5.61□□□□□ -1.51
SNHG4-201ENST00000448190 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
SNHG4-201ENST00000448190 SEC61GP60059 68 aa5.58□□□□□ -1.52
SNHG4-201ENST00000448190 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
SNHG4-201ENST00000448190 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
SNHG4-201ENST00000448190 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
SNHG4-201ENST00000448190 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
SNHG4-201ENST00000448190 A0A1B0GU33 70 aa5.49□□□□□ -1.53
SNHG4-201ENST00000448190 A0A0D9SG42 100 aa5.48□□□□□ -1.53
SNHG4-201ENST00000448190 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
SNHG4-201ENST00000448190 KMT2DO14686 5537 aa5.46□□□□□ -1.53
SNHG4-201ENST00000448190 A0A1B0GU69 56 aa5.46□□□□□ -1.54
SNHG4-201ENST00000448190 TMEM258P61165 79 aa5.42□□□□□ -1.54
SNHG4-201ENST00000448190 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
SNHG4-201ENST00000448190 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
SNHG4-201ENST00000448190 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
SNHG4-201ENST00000448190 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
SNHG4-201ENST00000448190 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
SNHG4-201ENST00000448190 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
SNHG4-201ENST00000448190 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
SNHG4-201ENST00000448190 A8MU10 97 aa5.34□□□□□ -1.55
SNHG4-201ENST00000448190 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
SNHG4-201ENST00000448190 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
SNHG4-201ENST00000448190 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
SNHG4-201ENST00000448190 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
SNHG4-201ENST00000448190 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
SNHG4-201ENST00000448190 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
SNHG4-201ENST00000448190 NEBP20929 6669 aa5.32□□□□□ -1.56
SNHG4-201ENST00000448190 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
SNHG4-201ENST00000448190 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
SNHG4-201ENST00000448190 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
SNHG4-201ENST00000448190 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
SNHG4-201ENST00000448190 PCP4P48539 62 aa5.25□□□□□ -1.57
SNHG4-201ENST00000448190 SPRR2EP22531 72 aa5.17□□□□□ -1.58
SNHG4-201ENST00000448190 SPRR2BP35325 72 aa5.17□□□□□ -1.58
SNHG4-201ENST00000448190 SPRR2AP35326 72 aa5.17□□□□□ -1.58
SNHG4-201ENST00000448190 UQCR11O14957 56 aa5.16□□□□□ -1.58
SNHG4-201ENST00000448190 PSPHP1O15172 72 aa5.14□□□□□ -1.59
SNHG4-201ENST00000448190 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
SNHG4-201ENST00000448190 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
SNHG4-201ENST00000448190 Q1T7F1 81 aa5.09□□□□□ -1.59
SNHG4-201ENST00000448190 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
SNHG4-201ENST00000448190 V9GYY9 64 aa5.09□□□□□ -1.59
SNHG4-201ENST00000448190 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
SNHG4-201ENST00000448190 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
SNHG4-201ENST00000448190 TNP1P09430 55 aa4.99□□□□□ -1.61
SNHG4-201ENST00000448190 SPRR2DP22532 72 aa4.99□□□□□ -1.61
SNHG4-201ENST00000448190 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
SNHG4-201ENST00000448190 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
SNHG4-201ENST00000448190 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
SNHG4-201ENST00000448190 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
SNHG4-201ENST00000448190 MT1EP04732 61 aa4.95□□□□□ -1.62
SNHG4-201ENST00000448190 A6NED7 52 aa4.94□□□□□ -1.62
SNHG4-201ENST00000448190 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
SNHG4-201ENST00000448190 K7ERS5 55 aa4.92□□□□□ -1.62
SNHG4-201ENST00000448190 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
SNHG4-201ENST00000448190 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms