RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 DMAC1Q96GE9 116 aa4.79□□□□□ -1.64
TTC39A-212ENST00000447632 HMCN2Q8NDA2 5059 aa4.78□□□□□ -1.64
TTC39A-212ENST00000447632 LRP2P98164 4655 aa4.77□□□□□ -1.65
TTC39A-212ENST00000447632 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
TTC39A-212ENST00000447632 C9orf92A6NGG3 77 aa4.75□□□□□ -1.65
TTC39A-212ENST00000447632 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
TTC39A-212ENST00000447632 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
TTC39A-212ENST00000447632 A0A1B0GU69 56 aa4.72□□□□□ -1.65
TTC39A-212ENST00000447632 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
TTC39A-212ENST00000447632 ROMO1P60602 79 aa4.71□□□□□ -1.66
TTC39A-212ENST00000447632 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
TTC39A-212ENST00000447632 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
TTC39A-212ENST00000447632 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
TTC39A-212ENST00000447632 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.66
TTC39A-212ENST00000447632 RNF213Q63HN8 5207 aa4.65□□□□□ -1.66
TTC39A-212ENST00000447632 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
TTC39A-212ENST00000447632 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
TTC39A-212ENST00000447632 MUC2Q02817 5179 aa4.64□□□□□ -1.67
TTC39A-212ENST00000447632 UQCR11O14957 56 aa4.64□□□□□ -1.67
TTC39A-212ENST00000447632 XP32Q5T750 250 aa4.63□□□□□ -1.67
TTC39A-212ENST00000447632 P0C880 135 aa4.6□□□□□ -1.67
TTC39A-212ENST00000447632 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
TTC39A-212ENST00000447632 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
TTC39A-212ENST00000447632 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
TTC39A-212ENST00000447632 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
TTC39A-212ENST00000447632 A8MUU9 505 aa4.51□□□□□ -1.69
TTC39A-212ENST00000447632 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
TTC39A-212ENST00000447632 H0YAA0 97 aa4.5□□□□□ -1.69
TTC39A-212ENST00000447632 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
TTC39A-212ENST00000447632 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
TTC39A-212ENST00000447632 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
TTC39A-212ENST00000447632 A0A1B0GU33 70 aa4.44□□□□□ -1.7
TTC39A-212ENST00000447632 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
TTC39A-212ENST00000447632 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
TTC39A-212ENST00000447632 H1FX-AS1Q4G0G2 97 aa4.42□□□□□ -1.7
TTC39A-212ENST00000447632 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
TTC39A-212ENST00000447632 K7ERS5 55 aa4.35□□□□□ -1.71
TTC39A-212ENST00000447632 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
TTC39A-212ENST00000447632 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
TTC39A-212ENST00000447632 KRTAP3-2Q9BYR7 98 aa4.32□□□□□ -1.72
TTC39A-212ENST00000447632 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
TTC39A-212ENST00000447632 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
TTC39A-212ENST00000447632 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
TTC39A-212ENST00000447632 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
TTC39A-212ENST00000447632 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
TTC39A-212ENST00000447632 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
TTC39A-212ENST00000447632 A0A0D9SG42 100 aa4.25□□□□□ -1.73
TTC39A-212ENST00000447632 M0R2T5 61 aa4.24□□□□□ -1.73
TTC39A-212ENST00000447632 MT1HP80294 61 aa4.23□□□□□ -1.73
TTC39A-212ENST00000447632 S4R3F8 94 aa4.21□□□□□ -1.74
TTC39A-212ENST00000447632 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
TTC39A-212ENST00000447632 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
TTC39A-212ENST00000447632 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
TTC39A-212ENST00000447632 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
TTC39A-212ENST00000447632 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
TTC39A-212ENST00000447632 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
TTC39A-212ENST00000447632 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
TTC39A-212ENST00000447632 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
TTC39A-212ENST00000447632 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
TTC39A-212ENST00000447632 M0QZ58 72 aa4.02□□□□□ -1.77
TTC39A-212ENST00000447632 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
TTC39A-212ENST00000447632 MT2AP02795 61 aa4□□□□□ -1.77
TTC39A-212ENST00000447632 MT1FP04733 61 aa3.99□□□□□ -1.77
TTC39A-212ENST00000447632 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
TTC39A-212ENST00000447632 R4GN34 69 aa3.91□□□□□ -1.78
TTC39A-212ENST00000447632 USH2AO75445 5202 aa3.91□□□□□ -1.78
TTC39A-212ENST00000447632 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.78
TTC39A-212ENST00000447632 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
TTC39A-212ENST00000447632 LCE2BO14633 110 aa3.85□□□□□ -1.79
TTC39A-212ENST00000447632 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
TTC39A-212ENST00000447632 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
TTC39A-212ENST00000447632 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
TTC39A-212ENST00000447632 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
TTC39A-212ENST00000447632 SPRR2GQ9BYE4 73 aa3.77□□□□□ -1.81
TTC39A-212ENST00000447632 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
TTC39A-212ENST00000447632 MT1BP07438 61 aa3.71□□□□□ -1.82
TTC39A-212ENST00000447632 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
TTC39A-212ENST00000447632 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
TTC39A-212ENST00000447632 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
TTC39A-212ENST00000447632 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
TTC39A-212ENST00000447632 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
TTC39A-212ENST00000447632 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
TTC39A-212ENST00000447632 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
TTC39A-212ENST00000447632 TNP1P09430 55 aa3.59□□□□□ -1.83
TTC39A-212ENST00000447632 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
TTC39A-212ENST00000447632 MT1XP80297 61 aa3.54□□□□□ -1.84
TTC39A-212ENST00000447632 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
TTC39A-212ENST00000447632 INE1O15225 51 aa3.52□□□□□ -1.85
TTC39A-212ENST00000447632 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
TTC39A-212ENST00000447632 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
TTC39A-212ENST00000447632 KMT2DO14686 5537 aa3.51□□□□□ -1.85
TTC39A-212ENST00000447632 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
TTC39A-212ENST00000447632 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
TTC39A-212ENST00000447632 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
TTC39A-212ENST00000447632 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.87
TTC39A-212ENST00000447632 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.87
TTC39A-212ENST00000447632 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.88
TTC39A-212ENST00000447632 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
TTC39A-212ENST00000447632 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
TTC39A-212ENST00000447632 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms