RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
HLA-DOB-207ENST00000447394 H7BZZ5 65 aa6.39□□□□□ -1.39
HLA-DOB-207ENST00000447394 PRO0628Q9UI54 55 aa6.38□□□□□ -1.39
HLA-DOB-207ENST00000447394 MT2AP02795 61 aa6.37□□□□□ -1.39
HLA-DOB-207ENST00000447394 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
HLA-DOB-207ENST00000447394 H3BPC8 53 aa6.35□□□□□ -1.39
HLA-DOB-207ENST00000447394 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
HLA-DOB-207ENST00000447394 S4R3F8 94 aa6.35□□□□□ -1.39
HLA-DOB-207ENST00000447394 LCA10Q71F78 164 aa6.34□□□□□ -1.39
HLA-DOB-207ENST00000447394 MT1FP04733 61 aa6.33□□□□□ -1.4
HLA-DOB-207ENST00000447394 SNURFQ9Y675 71 aa6.3□□□□□ -1.4
HLA-DOB-207ENST00000447394 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
HLA-DOB-207ENST00000447394 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
HLA-DOB-207ENST00000447394 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
HLA-DOB-207ENST00000447394 A8MUN3 132 aa6.23□□□□□ -1.41
HLA-DOB-207ENST00000447394 CSAG1Q6PB30 78 aa6.22□□□□□ -1.41
HLA-DOB-207ENST00000447394 DMAC1Q96GE9 116 aa6.22□□□□□ -1.41
HLA-DOB-207ENST00000447394 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
HLA-DOB-207ENST00000447394 USH2AO75445 5202 aa6.15□□□□□ -1.42
HLA-DOB-207ENST00000447394 LCE2BO14633 110 aa6.13□□□□□ -1.43
HLA-DOB-207ENST00000447394 Q1T7F1 81 aa6.13□□□□□ -1.43
HLA-DOB-207ENST00000447394 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
HLA-DOB-207ENST00000447394 V9GYY9 64 aa6.12□□□□□ -1.43
HLA-DOB-207ENST00000447394 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
HLA-DOB-207ENST00000447394 ACYP2P14621 99 aa6.08□□□□□ -1.44
HLA-DOB-207ENST00000447394 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
HLA-DOB-207ENST00000447394 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
HLA-DOB-207ENST00000447394 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
HLA-DOB-207ENST00000447394 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
HLA-DOB-207ENST00000447394 ADM2Q7Z4H4 148 aa6.02□□□□□ -1.45
HLA-DOB-207ENST00000447394 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
HLA-DOB-207ENST00000447394 H0YAA0 97 aa6□□□□□ -1.45
HLA-DOB-207ENST00000447394 CHKB-CPT1BH3BT56 60 aa6□□□□□ -1.45
HLA-DOB-207ENST00000447394 P0C880 135 aa5.96□□□□□ -1.46
HLA-DOB-207ENST00000447394 SEC61GP60059 68 aa5.96□□□□□ -1.46
HLA-DOB-207ENST00000447394 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
HLA-DOB-207ENST00000447394 COA5Q86WW8 74 aa5.96□□□□□ -1.46
HLA-DOB-207ENST00000447394 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
HLA-DOB-207ENST00000447394 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
HLA-DOB-207ENST00000447394 SPTSSBQ8NFR3 76 aa5.92□□□□□ -1.46
HLA-DOB-207ENST00000447394 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
HLA-DOB-207ENST00000447394 MT1BP07438 61 aa5.88□□□□□ -1.47
HLA-DOB-207ENST00000447394 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
HLA-DOB-207ENST00000447394 Q5VV11 94 aa5.86□□□□□ -1.47
HLA-DOB-207ENST00000447394 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
HLA-DOB-207ENST00000447394 PSPHP1O15172 72 aa5.83□□□□□ -1.48
HLA-DOB-207ENST00000447394 M0QZ58 72 aa5.81□□□□□ -1.48
HLA-DOB-207ENST00000447394 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
HLA-DOB-207ENST00000447394 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
HLA-DOB-207ENST00000447394 R4GN34 69 aa5.8□□□□□ -1.48
HLA-DOB-207ENST00000447394 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
HLA-DOB-207ENST00000447394 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
HLA-DOB-207ENST00000447394 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
HLA-DOB-207ENST00000447394 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
HLA-DOB-207ENST00000447394 A6NED7 52 aa5.72□□□□□ -1.49
HLA-DOB-207ENST00000447394 A6NN06 94 aa5.72□□□□□ -1.49
HLA-DOB-207ENST00000447394 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
HLA-DOB-207ENST00000447394 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
HLA-DOB-207ENST00000447394 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
HLA-DOB-207ENST00000447394 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
HLA-DOB-207ENST00000447394 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
HLA-DOB-207ENST00000447394 A0A1B0GU69 56 aa5.61□□□□□ -1.51
HLA-DOB-207ENST00000447394 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
HLA-DOB-207ENST00000447394 A8MU10 97 aa5.59□□□□□ -1.51
HLA-DOB-207ENST00000447394 A0A1B0GU33 70 aa5.58□□□□□ -1.52
HLA-DOB-207ENST00000447394 MT1XP80297 61 aa5.58□□□□□ -1.52
HLA-DOB-207ENST00000447394 A0A0D9SG42 100 aa5.55□□□□□ -1.52
HLA-DOB-207ENST00000447394 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
HLA-DOB-207ENST00000447394 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
HLA-DOB-207ENST00000447394 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
HLA-DOB-207ENST00000447394 UQCR11O14957 56 aa5.44□□□□□ -1.54
HLA-DOB-207ENST00000447394 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
HLA-DOB-207ENST00000447394 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
HLA-DOB-207ENST00000447394 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
HLA-DOB-207ENST00000447394 KMT2DO14686 5537 aa5.39□□□□□ -1.55
HLA-DOB-207ENST00000447394 MIR22HGQ0VDD5 57 aa5.39□□□□□ -1.55
HLA-DOB-207ENST00000447394 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
HLA-DOB-207ENST00000447394 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
HLA-DOB-207ENST00000447394 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
HLA-DOB-207ENST00000447394 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
HLA-DOB-207ENST00000447394 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
HLA-DOB-207ENST00000447394 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
HLA-DOB-207ENST00000447394 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
HLA-DOB-207ENST00000447394 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
HLA-DOB-207ENST00000447394 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
HLA-DOB-207ENST00000447394 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
HLA-DOB-207ENST00000447394 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
HLA-DOB-207ENST00000447394 NEBP20929 6669 aa5.16□□□□□ -1.58
HLA-DOB-207ENST00000447394 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
HLA-DOB-207ENST00000447394 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
HLA-DOB-207ENST00000447394 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
HLA-DOB-207ENST00000447394 K7ERS5 55 aa5.11□□□□□ -1.59
HLA-DOB-207ENST00000447394 H3BS24 57 aa5.06□□□□□ -1.6
HLA-DOB-207ENST00000447394 ROMO1P60602 79 aa5.03□□□□□ -1.6
HLA-DOB-207ENST00000447394 TNP1P09430 55 aa5.02□□□□□ -1.61
HLA-DOB-207ENST00000447394 SPRR2EP22531 72 aa5.01□□□□□ -1.61
HLA-DOB-207ENST00000447394 SPRR2BP35325 72 aa5.01□□□□□ -1.61
HLA-DOB-207ENST00000447394 SPRR2AP35326 72 aa5.01□□□□□ -1.61
HLA-DOB-207ENST00000447394 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
HLA-DOB-207ENST00000447394 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms