RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 KLKP1Q107X0 134 aa11.2□□□□□ -0.62
C9orf3-207ENST00000445181 H3BPC8 53 aa11.17□□□□□ -0.62
C9orf3-207ENST00000445181 KRTAP9-7A8MTY7 169 aa11.16□□□□□ -0.62
C9orf3-207ENST00000445181 FAM236AA0A1B0GUQ0 79 aa11.14□□□□□ -0.63
C9orf3-207ENST00000445181 FAM236BA0A1B0GV22 79 aa11.14□□□□□ -0.63
C9orf3-207ENST00000445181 FCGBPQ9Y6R7 5405 aaPredicted RBP11.14□□□□□ -0.63
C9orf3-207ENST00000445181 A8MUN3 132 aa11.11□□□□□ -0.63
C9orf3-207ENST00000445181 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
C9orf3-207ENST00000445181 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
C9orf3-207ENST00000445181 NDUFC1O43677 76 aa11.03□□□□□ -0.64
C9orf3-207ENST00000445181 TRAV7A0A075B6U4 112 aa11.01□□□□□ -0.65
C9orf3-207ENST00000445181 KRTAP19-6Q3LI70 58 aa11.01□□□□□ -0.65
C9orf3-207ENST00000445181 DMAC1Q96GE9 116 aa10.89□□□□□ -0.67
C9orf3-207ENST00000445181 H0YAA0 97 aa10.79□□□□□ -0.68
C9orf3-207ENST00000445181 SNURFQ9Y675 71 aa10.79□□□□□ -0.68
C9orf3-207ENST00000445181 MACF1Q9UPN3 7388 aaKnown RBP10.79□□□□□ -0.68
C9orf3-207ENST00000445181 SPRR2GQ9BYE4 73 aa10.77□□□□□ -0.69
C9orf3-207ENST00000445181 SERP2Q8N6R1 65 aa10.76□□□□□ -0.69
C9orf3-207ENST00000445181 ADM2Q7Z4H4 148 aa10.75□□□□□ -0.69
C9orf3-207ENST00000445181 CRIPTQ9P021 101 aa10.75□□□□□ -0.69
C9orf3-207ENST00000445181 ACYP2P14621 99 aa10.72□□□□□ -0.69
C9orf3-207ENST00000445181 C20orf197Q8N268 126 aa10.71□□□□□ -0.69
C9orf3-207ENST00000445181 Q5VV11 94 aa10.69□□□□□ -0.7
C9orf3-207ENST00000445181 SYNE2Q8WXH0 6885 aaKnown RBP10.67□□□□□ -0.7
C9orf3-207ENST00000445181 KRTAP19-8Q3LI54 63 aa10.64□□□□□ -0.71
C9orf3-207ENST00000445181 MT1BP07438 61 aa10.6□□□□□ -0.71
C9orf3-207ENST00000445181 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
C9orf3-207ENST00000445181 SPANXA2-OT1Q8N9U9 137 aa10.56□□□□□ -0.72
C9orf3-207ENST00000445181 SPTSSBQ8NFR3 76 aa10.56□□□□□ -0.72
C9orf3-207ENST00000445181 KRTAP6-3Q3LI67 103 aa10.52□□□□□ -0.73
C9orf3-207ENST00000445181 COX7CP15954 63 aa10.51□□□□□ -0.73
C9orf3-207ENST00000445181 P0C880 135 aa10.5□□□□□ -0.73
C9orf3-207ENST00000445181 A6NN06 94 aa10.49□□□□□ -0.73
C9orf3-207ENST00000445181 R4GN34 69 aa10.46□□□□□ -0.73
C9orf3-207ENST00000445181 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
C9orf3-207ENST00000445181 M0QZ58 72 aa10.39□□□□□ -0.75
C9orf3-207ENST00000445181 KRTAP10-5P60370 271 aa10.35□□□□□ -0.75
C9orf3-207ENST00000445181 ANAPC13Q9BS18 74 aa10.33□□□□□ -0.76
C9orf3-207ENST00000445181 COA5Q86WW8 74 aa10.28□□□□□ -0.76
C9orf3-207ENST00000445181 PLAC4Q8WY50 150 aa10.27□□□□□ -0.77
C9orf3-207ENST00000445181 H7BZZ5 65 aa10.26□□□□□ -0.77
C9orf3-207ENST00000445181 CYSTM1Q9H1C7 97 aa10.26□□□□□ -0.77
C9orf3-207ENST00000445181 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
C9orf3-207ENST00000445181 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
C9orf3-207ENST00000445181 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
C9orf3-207ENST00000445181 NEBP20929 6669 aa10.07□□□□□ -0.8
C9orf3-207ENST00000445181 SEC61GP60059 68 aa10.05□□□□□ -0.8
C9orf3-207ENST00000445181 MT1XP80297 61 aa10.03□□□□□ -0.8
C9orf3-207ENST00000445181 SERP1Q9Y6X1 66 aa10.01□□□□□ -0.81
C9orf3-207ENST00000445181 KRTAP5-9P26371 169 aa9.99□□□□□ -0.81
C9orf3-207ENST00000445181 MUC12Q9UKN1 5478 aa9.97□□□□□ -0.81
C9orf3-207ENST00000445181 KRTAP13-4Q3LI77 160 aa9.92□□□□□ -0.82
C9orf3-207ENST00000445181 ATP5EP56381 51 aaPredicted RBP9.88□□□□□ -0.83
C9orf3-207ENST00000445181 A0A1B0GU33 70 aa9.8□□□□□ -0.84
C9orf3-207ENST00000445181 KMT2DO14686 5537 aa9.79□□□□□ -0.84
C9orf3-207ENST00000445181 KRTAP20-1Q3LI63 56 aa9.79□□□□□ -0.84
C9orf3-207ENST00000445181 A0A1B0GU69 56 aa9.78□□□□□ -0.84
C9orf3-207ENST00000445181 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
C9orf3-207ENST00000445181 A0A0D9SG42 100 aa9.73□□□□□ -0.85
C9orf3-207ENST00000445181 TMEM258P61165 79 aa9.73□□□□□ -0.85
C9orf3-207ENST00000445181 KRTAP12-2P59991 146 aa9.72□□□□□ -0.85
C9orf3-207ENST00000445181 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
C9orf3-207ENST00000445181 SPRR2FQ96RM1 72 aa9.7□□□□□ -0.86
C9orf3-207ENST00000445181 MDN1Q9NU22 5596 aa9.69□□□□□ -0.86
C9orf3-207ENST00000445181 KRTAP8-1Q8IUC2 63 aa9.64□□□□□ -0.87
C9orf3-207ENST00000445181 KRTAP10-7P60409 375 aaPredicted RBP9.6□□□□□ -0.87
C9orf3-207ENST00000445181 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
C9orf3-207ENST00000445181 SPRR2EP22531 72 aa9.58□□□□□ -0.88
C9orf3-207ENST00000445181 SPRR2BP35325 72 aa9.58□□□□□ -0.88
C9orf3-207ENST00000445181 SPRR2AP35326 72 aa9.58□□□□□ -0.88
C9orf3-207ENST00000445181 SPINT4Q6UDR6 99 aa9.58□□□□□ -0.88
C9orf3-207ENST00000445181 SMIM26A0A096LP01 95 aa9.53□□□□□ -0.88
C9orf3-207ENST00000445181 KRTAP2-3P0C7H8 128 aa9.52□□□□□ -0.89
C9orf3-207ENST00000445181 KRTAP10-12P60413 245 aa9.52□□□□□ -0.89
C9orf3-207ENST00000445181 KRTAP2-4Q9BYR9 128 aa9.52□□□□□ -0.89
C9orf3-207ENST00000445181 KRTAP4-8A0A0G2JLE6 195 aa9.51□□□□□ -0.89
C9orf3-207ENST00000445181 KRTAP4-8Q9BYQ9 185 aa9.51□□□□□ -0.89
C9orf3-207ENST00000445181 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
C9orf3-207ENST00000445181 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
C9orf3-207ENST00000445181 A8MU10 97 aa9.44□□□□□ -0.9
C9orf3-207ENST00000445181 LCE1AQ5T7P2 110 aa9.43□□□□□ -0.9
C9orf3-207ENST00000445181 SPRR2DP22532 72 aa9.26□□□□□ -0.93
C9orf3-207ENST00000445181 UQCR11O14957 56 aa9.25□□□□□ -0.93
C9orf3-207ENST00000445181 KRTAP2-2Q9BYT5 123 aa9.21□□□□□ -0.94
C9orf3-207ENST00000445181 KRTAP2-1Q9BYU5 128 aa9.21□□□□□ -0.94
C9orf3-207ENST00000445181 V9GYY9 64 aa9.17□□□□□ -0.94
C9orf3-207ENST00000445181 PSPHP1O15172 72 aa9.09□□□□□ -0.95
C9orf3-207ENST00000445181 Q1T7F1 81 aa9.09□□□□□ -0.95
C9orf3-207ENST00000445181 PCP4P48539 62 aa9.08□□□□□ -0.96
C9orf3-207ENST00000445181 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
C9orf3-207ENST00000445181 C10orf95Q9H7T3 257 aa9.03□□□□□ -0.96
C9orf3-207ENST00000445181 LCE3BQ5TA77 95 aa9.02□□□□□ -0.97
C9orf3-207ENST00000445181 TNP1P09430 55 aa8.99□□□□□ -0.97
C9orf3-207ENST00000445181 KRTAP19-7Q3SYF9 63 aa8.94□□□□□ -0.98
C9orf3-207ENST00000445181 K7ERS5 55 aa8.89□□□□□ -0.99
C9orf3-207ENST00000445181 MT1EP04732 61 aa8.87□□□□□ -0.99
C9orf3-207ENST00000445181 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
C9orf3-207ENST00000445181 KRTAP19-5Q3LI72 72 aa8.85□□□□□ -0.99
C9orf3-207ENST00000445181 A6NED7 52 aa8.81□□□□□ -1
C9orf3-207ENST00000445181 LCE3AQ5TA76 89 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms