RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SMPD4P1-203ENST00000443839 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
SMPD4P1-203ENST00000443839 LPAP08519 4548 aa5.08□□□□□ -1.6
SMPD4P1-203ENST00000443839 Q5VV11 94 aa5.08□□□□□ -1.6
SMPD4P1-203ENST00000443839 LRP2P98164 4655 aa5.07□□□□□ -1.6
SMPD4P1-203ENST00000443839 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
SMPD4P1-203ENST00000443839 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
SMPD4P1-203ENST00000443839 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
SMPD4P1-203ENST00000443839 HRES1P13985 223 aa5.02□□□□□ -1.61
SMPD4P1-203ENST00000443839 SPINK7P58062 85 aa5.02□□□□□ -1.61
SMPD4P1-203ENST00000443839 CHKB-CPT1BH3BT56 60 aa5□□□□□ -1.61
SMPD4P1-203ENST00000443839 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
SMPD4P1-203ENST00000443839 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
SMPD4P1-203ENST00000443839 A8MU10 97 aa4.97□□□□□ -1.61
SMPD4P1-203ENST00000443839 A6NN06 94 aa4.97□□□□□ -1.61
SMPD4P1-203ENST00000443839 A6NED7 52 aa4.94□□□□□ -1.62
SMPD4P1-203ENST00000443839 ACYP2P14621 99 aa4.94□□□□□ -1.62
SMPD4P1-203ENST00000443839 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
SMPD4P1-203ENST00000443839 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
SMPD4P1-203ENST00000443839 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
SMPD4P1-203ENST00000443839 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
SMPD4P1-203ENST00000443839 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
SMPD4P1-203ENST00000443839 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
SMPD4P1-203ENST00000443839 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
SMPD4P1-203ENST00000443839 MUC2Q02817 5179 aa4.81□□□□□ -1.64
SMPD4P1-203ENST00000443839 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
SMPD4P1-203ENST00000443839 A0A1B0GU69 56 aa4.8□□□□□ -1.64
SMPD4P1-203ENST00000443839 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SMPD4P1-203ENST00000443839 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
SMPD4P1-203ENST00000443839 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
SMPD4P1-203ENST00000443839 H1FX-AS1Q4G0G2 97 aa4.76□□□□□ -1.65
SMPD4P1-203ENST00000443839 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
SMPD4P1-203ENST00000443839 S4R3F8 94 aa4.73□□□□□ -1.65
SMPD4P1-203ENST00000443839 UQCR11O14957 56 aa4.72□□□□□ -1.65
SMPD4P1-203ENST00000443839 RNF213Q63HN8 5207 aa4.71□□□□□ -1.65
SMPD4P1-203ENST00000443839 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
SMPD4P1-203ENST00000443839 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
SMPD4P1-203ENST00000443839 ROMO1P60602 79 aa4.68□□□□□ -1.66
SMPD4P1-203ENST00000443839 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
SMPD4P1-203ENST00000443839 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
SMPD4P1-203ENST00000443839 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
SMPD4P1-203ENST00000443839 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
SMPD4P1-203ENST00000443839 K7ERS5 55 aa4.57□□□□□ -1.68
SMPD4P1-203ENST00000443839 H0YAA0 97 aa4.57□□□□□ -1.68
SMPD4P1-203ENST00000443839 A0A1B0GU33 70 aa4.54□□□□□ -1.68
SMPD4P1-203ENST00000443839 M0R2T5 61 aa4.54□□□□□ -1.68
SMPD4P1-203ENST00000443839 P0C880 135 aa4.54□□□□□ -1.68
SMPD4P1-203ENST00000443839 MT1HP80294 61 aa4.54□□□□□ -1.68
SMPD4P1-203ENST00000443839 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
SMPD4P1-203ENST00000443839 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
SMPD4P1-203ENST00000443839 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.69
SMPD4P1-203ENST00000443839 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
SMPD4P1-203ENST00000443839 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
SMPD4P1-203ENST00000443839 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
SMPD4P1-203ENST00000443839 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
SMPD4P1-203ENST00000443839 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
SMPD4P1-203ENST00000443839 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
SMPD4P1-203ENST00000443839 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
SMPD4P1-203ENST00000443839 R4GN34 69 aa4.38□□□□□ -1.71
SMPD4P1-203ENST00000443839 M0QZ58 72 aa4.37□□□□□ -1.71
SMPD4P1-203ENST00000443839 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
SMPD4P1-203ENST00000443839 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
SMPD4P1-203ENST00000443839 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
SMPD4P1-203ENST00000443839 MT2AP02795 61 aa4.34□□□□□ -1.71
SMPD4P1-203ENST00000443839 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
SMPD4P1-203ENST00000443839 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
SMPD4P1-203ENST00000443839 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
SMPD4P1-203ENST00000443839 A0A0D9SG42 100 aa4.32□□□□□ -1.72
SMPD4P1-203ENST00000443839 MT1FP04733 61 aa4.32□□□□□ -1.72
SMPD4P1-203ENST00000443839 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
SMPD4P1-203ENST00000443839 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
SMPD4P1-203ENST00000443839 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
SMPD4P1-203ENST00000443839 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
SMPD4P1-203ENST00000443839 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
SMPD4P1-203ENST00000443839 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
SMPD4P1-203ENST00000443839 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
SMPD4P1-203ENST00000443839 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
SMPD4P1-203ENST00000443839 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
SMPD4P1-203ENST00000443839 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
SMPD4P1-203ENST00000443839 LCE3BQ5TA77 95 aa4.15□□□□□ -1.74
SMPD4P1-203ENST00000443839 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
SMPD4P1-203ENST00000443839 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
SMPD4P1-203ENST00000443839 C10orf95Q9H7T3 257 aa4.12□□□□□ -1.75
SMPD4P1-203ENST00000443839 MT1BP07438 61 aa4.07□□□□□ -1.76
SMPD4P1-203ENST00000443839 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
SMPD4P1-203ENST00000443839 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
SMPD4P1-203ENST00000443839 USH2AO75445 5202 aa3.99□□□□□ -1.77
SMPD4P1-203ENST00000443839 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
SMPD4P1-203ENST00000443839 MT1XP80297 61 aa3.94□□□□□ -1.78
SMPD4P1-203ENST00000443839 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
SMPD4P1-203ENST00000443839 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
SMPD4P1-203ENST00000443839 TNP1P09430 55 aa3.88□□□□□ -1.79
SMPD4P1-203ENST00000443839 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
SMPD4P1-203ENST00000443839 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
SMPD4P1-203ENST00000443839 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
SMPD4P1-203ENST00000443839 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
SMPD4P1-203ENST00000443839 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
SMPD4P1-203ENST00000443839 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
SMPD4P1-203ENST00000443839 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
SMPD4P1-203ENST00000443839 LCE3AQ5TA76 89 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms