RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 FAM236BA0A1B0GV22 79 aa5.12□□□□□ -1.59
HDAC6-211ENST00000443563 KLKP1Q107X0 134 aa5.12□□□□□ -1.59
HDAC6-211ENST00000443563 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
HDAC6-211ENST00000443563 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
HDAC6-211ENST00000443563 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
HDAC6-211ENST00000443563 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
HDAC6-211ENST00000443563 USH2AO75445 5202 aa5.07□□□□□ -1.6
HDAC6-211ENST00000443563 NDUFC1O43677 76 aa5.06□□□□□ -1.6
HDAC6-211ENST00000443563 LCE2BO14633 110 aa5.05□□□□□ -1.6
HDAC6-211ENST00000443563 DMAC1Q96GE9 116 aa5□□□□□ -1.61
HDAC6-211ENST00000443563 SERP2Q8N6R1 65 aa4.99□□□□□ -1.61
HDAC6-211ENST00000443563 H0YAA0 97 aa4.97□□□□□ -1.61
HDAC6-211ENST00000443563 SSPOA2VEC9 5147 aa4.96□□□□□ -1.62
HDAC6-211ENST00000443563 ACYP2P14621 99 aa4.95□□□□□ -1.62
HDAC6-211ENST00000443563 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
HDAC6-211ENST00000443563 C20orf197Q8N268 126 aa4.94□□□□□ -1.62
HDAC6-211ENST00000443563 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
HDAC6-211ENST00000443563 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
HDAC6-211ENST00000443563 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.63
HDAC6-211ENST00000443563 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
HDAC6-211ENST00000443563 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
HDAC6-211ENST00000443563 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
HDAC6-211ENST00000443563 COX7CP15954 63 aa4.88□□□□□ -1.63
HDAC6-211ENST00000443563 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
HDAC6-211ENST00000443563 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
HDAC6-211ENST00000443563 Q5VV11 94 aa4.85□□□□□ -1.63
HDAC6-211ENST00000443563 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
HDAC6-211ENST00000443563 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
HDAC6-211ENST00000443563 ANAPC13Q9BS18 74 aa4.8□□□□□ -1.64
HDAC6-211ENST00000443563 MT1BP07438 61 aa4.78□□□□□ -1.64
HDAC6-211ENST00000443563 R4GN34 69 aa4.78□□□□□ -1.64
HDAC6-211ENST00000443563 P0C880 135 aa4.77□□□□□ -1.65
HDAC6-211ENST00000443563 H7BZZ5 65 aa4.75□□□□□ -1.65
HDAC6-211ENST00000443563 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
HDAC6-211ENST00000443563 M0QZ58 72 aa4.73□□□□□ -1.65
HDAC6-211ENST00000443563 COA5Q86WW8 74 aa4.73□□□□□ -1.65
HDAC6-211ENST00000443563 A6NN06 94 aa4.71□□□□□ -1.66
HDAC6-211ENST00000443563 CYSTM1Q9H1C7 97 aa4.7□□□□□ -1.66
HDAC6-211ENST00000443563 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
HDAC6-211ENST00000443563 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
HDAC6-211ENST00000443563 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
HDAC6-211ENST00000443563 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
HDAC6-211ENST00000443563 SEC61GP60059 68 aa4.65□□□□□ -1.67
HDAC6-211ENST00000443563 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
HDAC6-211ENST00000443563 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
HDAC6-211ENST00000443563 LINC01554Q52M75 96 aa4.64□□□□□ -1.67
HDAC6-211ENST00000443563 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
HDAC6-211ENST00000443563 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
HDAC6-211ENST00000443563 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
HDAC6-211ENST00000443563 TMEM258P61165 79 aa4.54□□□□□ -1.68
HDAC6-211ENST00000443563 MT1XP80297 61 aa4.53□□□□□ -1.68
HDAC6-211ENST00000443563 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
HDAC6-211ENST00000443563 A0A1B0GU33 70 aa4.51□□□□□ -1.69
HDAC6-211ENST00000443563 A0A1B0GU69 56 aa4.51□□□□□ -1.69
HDAC6-211ENST00000443563 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
HDAC6-211ENST00000443563 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
HDAC6-211ENST00000443563 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
HDAC6-211ENST00000443563 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
HDAC6-211ENST00000443563 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
HDAC6-211ENST00000443563 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
HDAC6-211ENST00000443563 A0A0D9SG42 100 aa4.42□□□□□ -1.7
HDAC6-211ENST00000443563 SMIM26A0A096LP01 95 aa4.41□□□□□ -1.7
HDAC6-211ENST00000443563 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
HDAC6-211ENST00000443563 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
HDAC6-211ENST00000443563 KMT2DO14686 5537 aa4.38□□□□□ -1.71
HDAC6-211ENST00000443563 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
HDAC6-211ENST00000443563 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
HDAC6-211ENST00000443563 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
HDAC6-211ENST00000443563 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
HDAC6-211ENST00000443563 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
HDAC6-211ENST00000443563 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
HDAC6-211ENST00000443563 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-211ENST00000443563 V9GYY9 64 aa4.31□□□□□ -1.72
HDAC6-211ENST00000443563 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
HDAC6-211ENST00000443563 UQCR11O14957 56 aa4.3□□□□□ -1.72
HDAC6-211ENST00000443563 A8MU10 97 aa4.29□□□□□ -1.72
HDAC6-211ENST00000443563 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
HDAC6-211ENST00000443563 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
HDAC6-211ENST00000443563 Q1T7F1 81 aa4.25□□□□□ -1.73
HDAC6-211ENST00000443563 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
HDAC6-211ENST00000443563 NEBP20929 6669 aa4.23□□□□□ -1.73
HDAC6-211ENST00000443563 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
HDAC6-211ENST00000443563 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
HDAC6-211ENST00000443563 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
HDAC6-211ENST00000443563 PSPHP1O15172 72 aa4.18□□□□□ -1.74
HDAC6-211ENST00000443563 SPRR2EP22531 72 aa4.17□□□□□ -1.74
HDAC6-211ENST00000443563 SPRR2BP35325 72 aa4.17□□□□□ -1.74
HDAC6-211ENST00000443563 SPRR2AP35326 72 aa4.17□□□□□ -1.74
HDAC6-211ENST00000443563 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
HDAC6-211ENST00000443563 K7ERS5 55 aa4.14□□□□□ -1.75
HDAC6-211ENST00000443563 TNP1P09430 55 aa4.13□□□□□ -1.75
HDAC6-211ENST00000443563 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
HDAC6-211ENST00000443563 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
HDAC6-211ENST00000443563 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
HDAC6-211ENST00000443563 A6NED7 52 aa4.09□□□□□ -1.75
HDAC6-211ENST00000443563 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
HDAC6-211ENST00000443563 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
HDAC6-211ENST00000443563 SPRR2DP22532 72 aa4.04□□□□□ -1.76
HDAC6-211ENST00000443563 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
HDAC6-211ENST00000443563 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms