RNA–Protein interactions for RNA: ENST00000442217.5

CCDC115-203, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-203ENST00000442217 RPS28P62857 69 aaKnown RBP9.27□□□□□ -0.93
CCDC115-203ENST00000442217 LCA10Q71F78 164 aa9.27□□□□□ -0.93
CCDC115-203ENST00000442217 S4R3F8 94 aa9.27□□□□□ -0.93
CCDC115-203ENST00000442217 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
CCDC115-203ENST00000442217 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
CCDC115-203ENST00000442217 FAT4Q6V0I7 4981 aa9.22□□□□□ -0.93
CCDC115-203ENST00000442217 FLGP20930 4061 aaPredicted RBP9.16□□□□□ -0.94
CCDC115-203ENST00000442217 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
CCDC115-203ENST00000442217 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
CCDC115-203ENST00000442217 MT1HP80294 61 aa9.05□□□□□ -0.96
CCDC115-203ENST00000442217 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
CCDC115-203ENST00000442217 Q1T7F1 81 aa8.98□□□□□ -0.97
CCDC115-203ENST00000442217 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
CCDC115-203ENST00000442217 M0R2T5 61 aa8.94□□□□□ -0.98
CCDC115-203ENST00000442217 PRR15LQ9BU68 103 aa8.91□□□□□ -0.98
CCDC115-203ENST00000442217 V9GYY9 64 aa8.91□□□□□ -0.98
CCDC115-203ENST00000442217 PSPHP1O15172 72 aa8.91□□□□□ -0.98
CCDC115-203ENST00000442217 A0A1B0GU69 56 aa8.9□□□□□ -0.98
CCDC115-203ENST00000442217 ADM2Q7Z4H4 148 aa8.87□□□□□ -0.99
CCDC115-203ENST00000442217 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
CCDC115-203ENST00000442217 SEC61GP60059 68 aa8.84□□□□□ -0.99
CCDC115-203ENST00000442217 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
CCDC115-203ENST00000442217 P0C880 135 aa8.82□□□□□ -1
CCDC115-203ENST00000442217 Q5VV11 94 aa8.8□□□□□ -1
CCDC115-203ENST00000442217 H0YAA0 97 aa8.8□□□□□ -1
CCDC115-203ENST00000442217 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1
CCDC115-203ENST00000442217 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
CCDC115-203ENST00000442217 KRTAP9-8Q9BYQ0 159 aa8.68□□□□□ -1.02
CCDC115-203ENST00000442217 A0A1B0GU33 70 aa8.67□□□□□ -1.02
CCDC115-203ENST00000442217 MT2AP02795 61 aa8.66□□□□□ -1.02
CCDC115-203ENST00000442217 MT1FP04733 61 aa8.62□□□□□ -1.03
CCDC115-203ENST00000442217 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
CCDC115-203ENST00000442217 A6NED7 52 aa8.6□□□□□ -1.03
CCDC115-203ENST00000442217 SPATA8Q6RVD6 105 aa8.6□□□□□ -1.03
CCDC115-203ENST00000442217 UQCR11O14957 56 aa8.57□□□□□ -1.04
CCDC115-203ENST00000442217 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
CCDC115-203ENST00000442217 M0QZ58 72 aa8.54□□□□□ -1.04
CCDC115-203ENST00000442217 R4GN34 69 aa8.52□□□□□ -1.04
CCDC115-203ENST00000442217 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
CCDC115-203ENST00000442217 A8MU10 97 aa8.47□□□□□ -1.05
CCDC115-203ENST00000442217 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
CCDC115-203ENST00000442217 A0A0D9SG42 100 aa8.43□□□□□ -1.06
CCDC115-203ENST00000442217 PRO0628Q9UI54 55 aa8.43□□□□□ -1.06
CCDC115-203ENST00000442217 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
CCDC115-203ENST00000442217 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
CCDC115-203ENST00000442217 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
CCDC115-203ENST00000442217 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
CCDC115-203ENST00000442217 SPRR2GQ9BYE4 73 aa8.37□□□□□ -1.07
CCDC115-203ENST00000442217 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
CCDC115-203ENST00000442217 KRTAP12-1P59990 96 aa8.23□□□□□ -1.09
CCDC115-203ENST00000442217 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
CCDC115-203ENST00000442217 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
CCDC115-203ENST00000442217 LCE2BO14633 110 aa8.19□□□□□ -1.1
CCDC115-203ENST00000442217 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
CCDC115-203ENST00000442217 A6NN06 94 aa8.14□□□□□ -1.11
CCDC115-203ENST00000442217 MT1BP07438 61 aa8.13□□□□□ -1.11
CCDC115-203ENST00000442217 K7ERS5 55 aa8.08□□□□□ -1.12
CCDC115-203ENST00000442217 USH2AO75445 5202 aa8.08□□□□□ -1.12
CCDC115-203ENST00000442217 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
CCDC115-203ENST00000442217 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
CCDC115-203ENST00000442217 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
CCDC115-203ENST00000442217 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
CCDC115-203ENST00000442217 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
CCDC115-203ENST00000442217 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
CCDC115-203ENST00000442217 MT1XP80297 61 aa7.82□□□□□ -1.16
CCDC115-203ENST00000442217 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
CCDC115-203ENST00000442217 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
CCDC115-203ENST00000442217 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
CCDC115-203ENST00000442217 ROMO1P60602 79 aa7.77□□□□□ -1.17
CCDC115-203ENST00000442217 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
CCDC115-203ENST00000442217 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
CCDC115-203ENST00000442217 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
CCDC115-203ENST00000442217 TNP1P09430 55 aa7.54□□□□□ -1.2
CCDC115-203ENST00000442217 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
CCDC115-203ENST00000442217 PRAC1Q96KF2 57 aa7.52□□□□□ -1.21
CCDC115-203ENST00000442217 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
CCDC115-203ENST00000442217 FCGBPQ9Y6R7 5405 aaPredicted RBP7.5□□□□□ -1.21
CCDC115-203ENST00000442217 CRCT1Q9UGL9 99 aa7.49□□□□□ -1.21
CCDC115-203ENST00000442217 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
CCDC115-203ENST00000442217 KMT2DO14686 5537 aa7.35□□□□□ -1.23
CCDC115-203ENST00000442217 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
CCDC115-203ENST00000442217 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
CCDC115-203ENST00000442217 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
CCDC115-203ENST00000442217 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
CCDC115-203ENST00000442217 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
CCDC115-203ENST00000442217 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
CCDC115-203ENST00000442217 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
CCDC115-203ENST00000442217 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
CCDC115-203ENST00000442217 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
CCDC115-203ENST00000442217 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
CCDC115-203ENST00000442217 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
CCDC115-203ENST00000442217 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
CCDC115-203ENST00000442217 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
CCDC115-203ENST00000442217 H3BS24 57 aa6.87□□□□□ -1.31
CCDC115-203ENST00000442217 MT1EP04732 61 aa6.86□□□□□ -1.31
CCDC115-203ENST00000442217 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
CCDC115-203ENST00000442217 MUC12Q9UKN1 5478 aa6.82□□□□□ -1.32
CCDC115-203ENST00000442217 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
CCDC115-203ENST00000442217 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
CCDC115-203ENST00000442217 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms