RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
CSNK1E-210ENST00000442216 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
CSNK1E-210ENST00000442216 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
CSNK1E-210ENST00000442216 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.3
CSNK1E-210ENST00000442216 NDUFC1O43677 76 aa6.93□□□□□ -1.3
CSNK1E-210ENST00000442216 DMAC1Q96GE9 116 aa6.88□□□□□ -1.31
CSNK1E-210ENST00000442216 H0YAA0 97 aa6.86□□□□□ -1.31
CSNK1E-210ENST00000442216 USH2AO75445 5202 aa6.83□□□□□ -1.32
CSNK1E-210ENST00000442216 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
CSNK1E-210ENST00000442216 SERP2Q8N6R1 65 aa6.81□□□□□ -1.32
CSNK1E-210ENST00000442216 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
CSNK1E-210ENST00000442216 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
CSNK1E-210ENST00000442216 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
CSNK1E-210ENST00000442216 ACYP2P14621 99 aa6.77□□□□□ -1.33
CSNK1E-210ENST00000442216 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
CSNK1E-210ENST00000442216 SSPOA2VEC9 5147 aa6.73□□□□□ -1.33
CSNK1E-210ENST00000442216 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
CSNK1E-210ENST00000442216 C20orf197Q8N268 126 aa6.73□□□□□ -1.33
CSNK1E-210ENST00000442216 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
CSNK1E-210ENST00000442216 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
CSNK1E-210ENST00000442216 Q5VV11 94 aa6.7□□□□□ -1.34
CSNK1E-210ENST00000442216 MT1BP07438 61 aa6.67□□□□□ -1.34
CSNK1E-210ENST00000442216 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
CSNK1E-210ENST00000442216 COX7CP15954 63 aa6.65□□□□□ -1.34
CSNK1E-210ENST00000442216 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
CSNK1E-210ENST00000442216 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
CSNK1E-210ENST00000442216 P0C880 135 aa6.58□□□□□ -1.36
CSNK1E-210ENST00000442216 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
CSNK1E-210ENST00000442216 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
CSNK1E-210ENST00000442216 R4GN34 69 aa6.56□□□□□ -1.36
CSNK1E-210ENST00000442216 A6NN06 94 aa6.52□□□□□ -1.37
CSNK1E-210ENST00000442216 H7BZZ5 65 aa6.5□□□□□ -1.37
CSNK1E-210ENST00000442216 M0QZ58 72 aa6.5□□□□□ -1.37
CSNK1E-210ENST00000442216 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
CSNK1E-210ENST00000442216 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
CSNK1E-210ENST00000442216 KRTAP9-7A8MTY7 169 aa6.49□□□□□ -1.37
CSNK1E-210ENST00000442216 COA5Q86WW8 74 aa6.46□□□□□ -1.38
CSNK1E-210ENST00000442216 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
CSNK1E-210ENST00000442216 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
CSNK1E-210ENST00000442216 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
CSNK1E-210ENST00000442216 LINC01554Q52M75 96 aa6.35□□□□□ -1.39
CSNK1E-210ENST00000442216 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
CSNK1E-210ENST00000442216 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
CSNK1E-210ENST00000442216 SEC61GP60059 68 aa6.31□□□□□ -1.4
CSNK1E-210ENST00000442216 MT1XP80297 61 aa6.31□□□□□ -1.4
CSNK1E-210ENST00000442216 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
CSNK1E-210ENST00000442216 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
CSNK1E-210ENST00000442216 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
CSNK1E-210ENST00000442216 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
CSNK1E-210ENST00000442216 TMEM258P61165 79 aa6.17□□□□□ -1.42
CSNK1E-210ENST00000442216 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
CSNK1E-210ENST00000442216 A0A1B0GU33 70 aa6.16□□□□□ -1.42
CSNK1E-210ENST00000442216 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
CSNK1E-210ENST00000442216 A0A1B0GU69 56 aa6.14□□□□□ -1.43
CSNK1E-210ENST00000442216 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
CSNK1E-210ENST00000442216 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
CSNK1E-210ENST00000442216 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
CSNK1E-210ENST00000442216 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
CSNK1E-210ENST00000442216 A0A0D9SG42 100 aa6.04□□□□□ -1.44
CSNK1E-210ENST00000442216 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
CSNK1E-210ENST00000442216 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
CSNK1E-210ENST00000442216 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
CSNK1E-210ENST00000442216 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
CSNK1E-210ENST00000442216 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
CSNK1E-210ENST00000442216 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
CSNK1E-210ENST00000442216 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
CSNK1E-210ENST00000442216 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
CSNK1E-210ENST00000442216 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
CSNK1E-210ENST00000442216 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
CSNK1E-210ENST00000442216 A8MU10 97 aa5.89□□□□□ -1.47
CSNK1E-210ENST00000442216 UQCR11O14957 56 aa5.85□□□□□ -1.47
CSNK1E-210ENST00000442216 KMT2DO14686 5537 aa5.85□□□□□ -1.47
CSNK1E-210ENST00000442216 V9GYY9 64 aa5.83□□□□□ -1.48
CSNK1E-210ENST00000442216 SPRR2EP22531 72 aa5.8□□□□□ -1.48
CSNK1E-210ENST00000442216 SPRR2BP35325 72 aa5.8□□□□□ -1.48
CSNK1E-210ENST00000442216 SPRR2AP35326 72 aa5.8□□□□□ -1.48
CSNK1E-210ENST00000442216 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
CSNK1E-210ENST00000442216 NEBP20929 6669 aa5.78□□□□□ -1.48
CSNK1E-210ENST00000442216 Q1T7F1 81 aa5.77□□□□□ -1.49
CSNK1E-210ENST00000442216 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
CSNK1E-210ENST00000442216 PCP4P48539 62 aa5.74□□□□□ -1.49
CSNK1E-210ENST00000442216 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
CSNK1E-210ENST00000442216 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
CSNK1E-210ENST00000442216 PSPHP1O15172 72 aa5.68□□□□□ -1.5
CSNK1E-210ENST00000442216 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
CSNK1E-210ENST00000442216 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
CSNK1E-210ENST00000442216 TNP1P09430 55 aa5.66□□□□□ -1.5
CSNK1E-210ENST00000442216 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
CSNK1E-210ENST00000442216 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
CSNK1E-210ENST00000442216 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
CSNK1E-210ENST00000442216 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
CSNK1E-210ENST00000442216 SPRR2DP22532 72 aa5.61□□□□□ -1.51
CSNK1E-210ENST00000442216 K7ERS5 55 aa5.59□□□□□ -1.51
CSNK1E-210ENST00000442216 MT1EP04732 61 aa5.58□□□□□ -1.52
CSNK1E-210ENST00000442216 A6NED7 52 aa5.53□□□□□ -1.52
CSNK1E-210ENST00000442216 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
CSNK1E-210ENST00000442216 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
CSNK1E-210ENST00000442216 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
CSNK1E-210ENST00000442216 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
CSNK1E-210ENST00000442216 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms