RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
PDGFB-203ENST00000440375 CSAG1Q6PB30 78 aa5.38□□□□□ -1.55
PDGFB-203ENST00000440375 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
PDGFB-203ENST00000440375 CYP4F30PQ9H0H9 118 aa5.38□□□□□ -1.55
PDGFB-203ENST00000440375 LOC101927531A0A1B0GV80 90 aa5.37□□□□□ -1.55
PDGFB-203ENST00000440375 SPRR2GQ9BYE4 73 aa5.36□□□□□ -1.55
PDGFB-203ENST00000440375 ATOX1O00244 68 aa5.35□□□□□ -1.55
PDGFB-203ENST00000440375 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
PDGFB-203ENST00000440375 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
PDGFB-203ENST00000440375 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
PDGFB-203ENST00000440375 Q5VV11 94 aa5.34□□□□□ -1.55
PDGFB-203ENST00000440375 A6NN06 94 aa5.33□□□□□ -1.56
PDGFB-203ENST00000440375 PCP4P48539 62 aa5.33□□□□□ -1.56
PDGFB-203ENST00000440375 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
PDGFB-203ENST00000440375 MP68P56378 58 aa5.31□□□□□ -1.56
PDGFB-203ENST00000440375 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
PDGFB-203ENST00000440375 NEBP20929 6669 aa5.29□□□□□ -1.56
PDGFB-203ENST00000440375 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
PDGFB-203ENST00000440375 H3BPC8 53 aa5.24□□□□□ -1.57
PDGFB-203ENST00000440375 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
PDGFB-203ENST00000440375 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
PDGFB-203ENST00000440375 SMIM20Q8N5G0 67 aa5.22□□□□□ -1.57
PDGFB-203ENST00000440375 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
PDGFB-203ENST00000440375 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
PDGFB-203ENST00000440375 A8MUN3 132 aa5.16□□□□□ -1.58
PDGFB-203ENST00000440375 NDUFC1O43677 76 aa5.15□□□□□ -1.59
PDGFB-203ENST00000440375 H0YAA0 97 aa5.14□□□□□ -1.59
PDGFB-203ENST00000440375 KMT2DO14686 5537 aa5.13□□□□□ -1.59
PDGFB-203ENST00000440375 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
PDGFB-203ENST00000440375 SERP2Q8N6R1 65 aa5.13□□□□□ -1.59
PDGFB-203ENST00000440375 SNURFQ9Y675 71 aa5.13□□□□□ -1.59
PDGFB-203ENST00000440375 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
PDGFB-203ENST00000440375 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
PDGFB-203ENST00000440375 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
PDGFB-203ENST00000440375 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
PDGFB-203ENST00000440375 C20orf197Q8N268 126 aa5.1□□□□□ -1.59
PDGFB-203ENST00000440375 COX7CP15954 63 aa5.05□□□□□ -1.6
PDGFB-203ENST00000440375 MT1XP80297 61 aa5.05□□□□□ -1.6
PDGFB-203ENST00000440375 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
PDGFB-203ENST00000440375 P0C880 135 aa5.01□□□□□ -1.61
PDGFB-203ENST00000440375 ACYP2P14621 99 aa5.01□□□□□ -1.61
PDGFB-203ENST00000440375 CCDC179H3BU77 68 aa5□□□□□ -1.61
PDGFB-203ENST00000440375 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
PDGFB-203ENST00000440375 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
PDGFB-203ENST00000440375 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
PDGFB-203ENST00000440375 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
PDGFB-203ENST00000440375 R4GN34 69 aa4.96□□□□□ -1.62
PDGFB-203ENST00000440375 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
PDGFB-203ENST00000440375 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
PDGFB-203ENST00000440375 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
PDGFB-203ENST00000440375 M0QZ58 72 aa4.94□□□□□ -1.62
PDGFB-203ENST00000440375 TMEM258P61165 79 aa4.93□□□□□ -1.62
PDGFB-203ENST00000440375 H7BZZ5 65 aa4.91□□□□□ -1.62
PDGFB-203ENST00000440375 SPRR2EP22531 72 aa4.91□□□□□ -1.62
PDGFB-203ENST00000440375 SPRR2BP35325 72 aa4.91□□□□□ -1.62
PDGFB-203ENST00000440375 SPRR2AP35326 72 aa4.91□□□□□ -1.62
PDGFB-203ENST00000440375 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
PDGFB-203ENST00000440375 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
PDGFB-203ENST00000440375 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
PDGFB-203ENST00000440375 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
PDGFB-203ENST00000440375 ATP5EP56381 51 aaPredicted RBP4.87□□□□□ -1.63
PDGFB-203ENST00000440375 COA5Q86WW8 74 aa4.87□□□□□ -1.63
PDGFB-203ENST00000440375 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
PDGFB-203ENST00000440375 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
PDGFB-203ENST00000440375 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
PDGFB-203ENST00000440375 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
PDGFB-203ENST00000440375 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
PDGFB-203ENST00000440375 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
PDGFB-203ENST00000440375 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
PDGFB-203ENST00000440375 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
PDGFB-203ENST00000440375 SPRR2DP22532 72 aa4.75□□□□□ -1.65
PDGFB-203ENST00000440375 SERP1Q9Y6X1 66 aa4.75□□□□□ -1.65
PDGFB-203ENST00000440375 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
PDGFB-203ENST00000440375 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
PDGFB-203ENST00000440375 SEC61GP60059 68 aa4.68□□□□□ -1.66
PDGFB-203ENST00000440375 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
PDGFB-203ENST00000440375 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
PDGFB-203ENST00000440375 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
PDGFB-203ENST00000440375 A0A1B0GU33 70 aa4.6□□□□□ -1.67
PDGFB-203ENST00000440375 A0A1B0GU69 56 aa4.6□□□□□ -1.67
PDGFB-203ENST00000440375 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
PDGFB-203ENST00000440375 V9GYY9 64 aa4.57□□□□□ -1.68
PDGFB-203ENST00000440375 A0A0D9SG42 100 aa4.56□□□□□ -1.68
PDGFB-203ENST00000440375 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
PDGFB-203ENST00000440375 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
PDGFB-203ENST00000440375 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
PDGFB-203ENST00000440375 Q1T7F1 81 aa4.51□□□□□ -1.69
PDGFB-203ENST00000440375 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
PDGFB-203ENST00000440375 PRR15LQ9BU68 103 aa4.51□□□□□ -1.69
PDGFB-203ENST00000440375 MT1EP04732 61 aa4.47□□□□□ -1.69
PDGFB-203ENST00000440375 A8MU10 97 aa4.46□□□□□ -1.7
PDGFB-203ENST00000440375 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
PDGFB-203ENST00000440375 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
PDGFB-203ENST00000440375 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
PDGFB-203ENST00000440375 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
PDGFB-203ENST00000440375 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
PDGFB-203ENST00000440375 PSPHP1O15172 72 aa4.37□□□□□ -1.71
PDGFB-203ENST00000440375 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
PDGFB-203ENST00000440375 UQCR11O14957 56 aa4.36□□□□□ -1.71
PDGFB-203ENST00000440375 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms