RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 SEC61GP60059 68 aa8.83□□□□□ -1
TVP23C-204ENST00000438826 LCA10Q71F78 164 aa8.82□□□□□ -1
TVP23C-204ENST00000438826 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
TVP23C-204ENST00000438826 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
TVP23C-204ENST00000438826 A8MU10 97 aa8.8□□□□□ -1
TVP23C-204ENST00000438826 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
TVP23C-204ENST00000438826 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
TVP23C-204ENST00000438826 S4R3F8 94 aa8.76□□□□□ -1.01
TVP23C-204ENST00000438826 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
TVP23C-204ENST00000438826 UQCR11O14957 56 aa8.74□□□□□ -1.01
TVP23C-204ENST00000438826 LCE2DQ5TA82 110 aaPredicted RBP8.72□□□□□ -1.01
TVP23C-204ENST00000438826 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
TVP23C-204ENST00000438826 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
TVP23C-204ENST00000438826 A0A1B0GU33 70 aa8.61□□□□□ -1.03
TVP23C-204ENST00000438826 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
TVP23C-204ENST00000438826 KRTAP4-1Q9BYQ7 146 aa8.6□□□□□ -1.03
TVP23C-204ENST00000438826 PMAIP1Q13794 54 aa8.56□□□□□ -1.04
TVP23C-204ENST00000438826 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
TVP23C-204ENST00000438826 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
TVP23C-204ENST00000438826 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
TVP23C-204ENST00000438826 H0YAA0 97 aa8.51□□□□□ -1.05
TVP23C-204ENST00000438826 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
TVP23C-204ENST00000438826 HERC1Q15751 4861 aa8.48□□□□□ -1.05
TVP23C-204ENST00000438826 A6NN06 94 aa8.45□□□□□ -1.06
TVP23C-204ENST00000438826 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
TVP23C-204ENST00000438826 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
TVP23C-204ENST00000438826 P0C880 135 aa8.41□□□□□ -1.06
TVP23C-204ENST00000438826 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
TVP23C-204ENST00000438826 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
TVP23C-204ENST00000438826 MUC2Q02817 5179 aa8.32□□□□□ -1.08
TVP23C-204ENST00000438826 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
TVP23C-204ENST00000438826 K7ERS5 55 aa8.22□□□□□ -1.09
TVP23C-204ENST00000438826 A0A0D9SG42 100 aa8.21□□□□□ -1.09
TVP23C-204ENST00000438826 M0QZ58 72 aa8.21□□□□□ -1.09
TVP23C-204ENST00000438826 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
TVP23C-204ENST00000438826 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
TVP23C-204ENST00000438826 R4GN34 69 aa8.11□□□□□ -1.11
TVP23C-204ENST00000438826 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
TVP23C-204ENST00000438826 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-204ENST00000438826 KRTAP12-2P59991 146 aa8.02□□□□□ -1.12
TVP23C-204ENST00000438826 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
TVP23C-204ENST00000438826 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
TVP23C-204ENST00000438826 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
TVP23C-204ENST00000438826 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
TVP23C-204ENST00000438826 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
TVP23C-204ENST00000438826 MT1HP80294 61 aa7.93□□□□□ -1.14
TVP23C-204ENST00000438826 ROMO1P60602 79 aa7.92□□□□□ -1.14
TVP23C-204ENST00000438826 M0R2T5 61 aa7.92□□□□□ -1.14
TVP23C-204ENST00000438826 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
TVP23C-204ENST00000438826 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
TVP23C-204ENST00000438826 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
TVP23C-204ENST00000438826 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
TVP23C-204ENST00000438826 MT2AP02795 61 aa7.68□□□□□ -1.18
TVP23C-204ENST00000438826 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
TVP23C-204ENST00000438826 MT1FP04733 61 aa7.65□□□□□ -1.18
TVP23C-204ENST00000438826 KRTAP10-10P60014 251 aa7.65□□□□□ -1.18
TVP23C-204ENST00000438826 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
TVP23C-204ENST00000438826 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
TVP23C-204ENST00000438826 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
TVP23C-204ENST00000438826 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
TVP23C-204ENST00000438826 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
TVP23C-204ENST00000438826 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.23
TVP23C-204ENST00000438826 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
TVP23C-204ENST00000438826 MT1BP07438 61 aa7.3□□□□□ -1.24
TVP23C-204ENST00000438826 TNP1P09430 55 aa7.3□□□□□ -1.24
TVP23C-204ENST00000438826 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
TVP23C-204ENST00000438826 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
TVP23C-204ENST00000438826 LCE2BO14633 110 aa7.14□□□□□ -1.27
TVP23C-204ENST00000438826 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
TVP23C-204ENST00000438826 MT1XP80297 61 aa7.13□□□□□ -1.27
TVP23C-204ENST00000438826 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
TVP23C-204ENST00000438826 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
TVP23C-204ENST00000438826 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
TVP23C-204ENST00000438826 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
TVP23C-204ENST00000438826 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
TVP23C-204ENST00000438826 USH2AO75445 5202 aa6.86□□□□□ -1.31
TVP23C-204ENST00000438826 KRTAP8-1Q8IUC2 63 aa6.79□□□□□ -1.32
TVP23C-204ENST00000438826 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
TVP23C-204ENST00000438826 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
TVP23C-204ENST00000438826 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
TVP23C-204ENST00000438826 KRTAP19-6Q3LI70 58 aa6.62□□□□□ -1.35
TVP23C-204ENST00000438826 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
TVP23C-204ENST00000438826 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
TVP23C-204ENST00000438826 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
TVP23C-204ENST00000438826 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
TVP23C-204ENST00000438826 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
TVP23C-204ENST00000438826 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
TVP23C-204ENST00000438826 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
TVP23C-204ENST00000438826 KMT2DO14686 5537 aa6.49□□□□□ -1.37
TVP23C-204ENST00000438826 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
TVP23C-204ENST00000438826 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
TVP23C-204ENST00000438826 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
TVP23C-204ENST00000438826 LCE3CQ5T5A8 94 aa6.24□□□□□ -1.41
TVP23C-204ENST00000438826 MT1EP04732 61 aa6.23□□□□□ -1.41
TVP23C-204ENST00000438826 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
TVP23C-204ENST00000438826 H3BS24 57 aa6.16□□□□□ -1.42
TVP23C-204ENST00000438826 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
TVP23C-204ENST00000438826 MT1LQ93083 61 aa6.15□□□□□ -1.43
TVP23C-204ENST00000438826 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
TVP23C-204ENST00000438826 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms