RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 USH2AO75445 5202 aa11.1□□□□□ -0.63
RBFOX2-209ENST00000438146 TRAV7A0A075B6U4 112 aa11.04□□□□□ -0.64
RBFOX2-209ENST00000438146 A8MUN3 132 aa11.04□□□□□ -0.64
RBFOX2-209ENST00000438146 SMIM20Q8N5G0 67 aa11.03□□□□□ -0.64
RBFOX2-209ENST00000438146 NDUFC1O43677 76 aa10.97□□□□□ -0.65
RBFOX2-209ENST00000438146 SSPOA2VEC9 5147 aa10.96□□□□□ -0.66
RBFOX2-209ENST00000438146 DMAC1Q96GE9 116 aa10.89□□□□□ -0.67
RBFOX2-209ENST00000438146 SNURFQ9Y675 71 aa10.86□□□□□ -0.67
RBFOX2-209ENST00000438146 KRTAP19-1Q8IUB9 90 aa10.83□□□□□ -0.68
RBFOX2-209ENST00000438146 SERP2Q8N6R1 65 aa10.81□□□□□ -0.68
RBFOX2-209ENST00000438146 C20orf197Q8N268 126 aa10.77□□□□□ -0.68
RBFOX2-209ENST00000438146 H0YAA0 97 aa10.72□□□□□ -0.69
RBFOX2-209ENST00000438146 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
RBFOX2-209ENST00000438146 SPRR2GQ9BYE4 73 aa10.71□□□□□ -0.69
RBFOX2-209ENST00000438146 ACYP2P14621 99 aa10.69□□□□□ -0.7
RBFOX2-209ENST00000438146 KRTAP19-6Q3LI70 58 aa10.65□□□□□ -0.7
RBFOX2-209ENST00000438146 CRIPTQ9P021 101 aa10.64□□□□□ -0.71
RBFOX2-209ENST00000438146 FCGBPQ9Y6R7 5405 aaPredicted RBP10.62□□□□□ -0.71
RBFOX2-209ENST00000438146 MT1BP07438 61 aa10.59□□□□□ -0.71
RBFOX2-209ENST00000438146 KRTAP19-8Q3LI54 63 aa10.59□□□□□ -0.71
RBFOX2-209ENST00000438146 Q5VV11 94 aa10.59□□□□□ -0.71
RBFOX2-209ENST00000438146 COX7CP15954 63 aa10.57□□□□□ -0.72
RBFOX2-209ENST00000438146 SPANXA2-OT1Q8N9U9 137 aa10.56□□□□□ -0.72
RBFOX2-209ENST00000438146 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
RBFOX2-209ENST00000438146 P0C880 135 aa10.52□□□□□ -0.72
RBFOX2-209ENST00000438146 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.5□□□□□ -0.73
RBFOX2-209ENST00000438146 SPTSSBQ8NFR3 76 aa10.48□□□□□ -0.73
RBFOX2-209ENST00000438146 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
RBFOX2-209ENST00000438146 CYSTM1Q9H1C7 97 aa10.42□□□□□ -0.74
RBFOX2-209ENST00000438146 ANAPC13Q9BS18 74 aa10.41□□□□□ -0.74
RBFOX2-209ENST00000438146 R4GN34 69 aa10.39□□□□□ -0.75
RBFOX2-209ENST00000438146 M0QZ58 72 aa10.36□□□□□ -0.75
RBFOX2-209ENST00000438146 A6NN06 94 aa10.34□□□□□ -0.75
RBFOX2-209ENST00000438146 H7BZZ5 65 aa10.34□□□□□ -0.75
RBFOX2-209ENST00000438146 COA5Q86WW8 74 aa10.32□□□□□ -0.76
RBFOX2-209ENST00000438146 KRTAP9-7A8MTY7 169 aa10.26□□□□□ -0.77
RBFOX2-209ENST00000438146 MACF1Q9UPN3 7388 aaKnown RBP10.25□□□□□ -0.77
RBFOX2-209ENST00000438146 KRTAP10-5P60370 271 aa10.25□□□□□ -0.77
RBFOX2-209ENST00000438146 LINC01554Q52M75 96 aa10.23□□□□□ -0.77
RBFOX2-209ENST00000438146 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
RBFOX2-209ENST00000438146 PLAC4Q8WY50 150 aa10.16□□□□□ -0.78
RBFOX2-209ENST00000438146 SYNE2Q8WXH0 6885 aaKnown RBP10.13□□□□□ -0.79
RBFOX2-209ENST00000438146 MT1XP80297 61 aa10.01□□□□□ -0.81
RBFOX2-209ENST00000438146 SEC61GP60059 68 aa9.99□□□□□ -0.81
RBFOX2-209ENST00000438146 KRTAP13-4Q3LI77 160 aa9.98□□□□□ -0.81
RBFOX2-209ENST00000438146 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
RBFOX2-209ENST00000438146 SERP1Q9Y6X1 66 aa9.97□□□□□ -0.81
RBFOX2-209ENST00000438146 ATP5EP56381 51 aaPredicted RBP9.88□□□□□ -0.83
RBFOX2-209ENST00000438146 KRTAP6-3Q3LI67 103 aa9.88□□□□□ -0.83
RBFOX2-209ENST00000438146 A0A1B0GU33 70 aa9.79□□□□□ -0.84
RBFOX2-209ENST00000438146 A0A1B0GU69 56 aa9.78□□□□□ -0.84
RBFOX2-209ENST00000438146 TMEM258P61165 79 aa9.78□□□□□ -0.84
RBFOX2-209ENST00000438146 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
RBFOX2-209ENST00000438146 A0A0D9SG42 100 aa9.75□□□□□ -0.85
RBFOX2-209ENST00000438146 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
RBFOX2-209ENST00000438146 CAMK2N1Q7Z7J9 78 aa9.63□□□□□ -0.87
RBFOX2-209ENST00000438146 KMT2DO14686 5537 aa9.6□□□□□ -0.87
RBFOX2-209ENST00000438146 KRTAP10-7P60409 375 aaPredicted RBP9.59□□□□□ -0.87
RBFOX2-209ENST00000438146 SPINT4Q6UDR6 99 aa9.57□□□□□ -0.88
RBFOX2-209ENST00000438146 KRTAP5-9P26371 169 aa9.56□□□□□ -0.88
RBFOX2-209ENST00000438146 PRR15LQ9BU68 103 aa9.55□□□□□ -0.88
RBFOX2-209ENST00000438146 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
RBFOX2-209ENST00000438146 KRTAP4-8A0A0G2JLE6 195 aa9.51□□□□□ -0.89
RBFOX2-209ENST00000438146 KRTAP8-1Q8IUC2 63 aa9.51□□□□□ -0.89
RBFOX2-209ENST00000438146 KRTAP4-8Q9BYQ9 185 aa9.51□□□□□ -0.89
RBFOX2-209ENST00000438146 KRTAP12-1P59990 96 aa9.5□□□□□ -0.89
RBFOX2-209ENST00000438146 A8MU10 97 aa9.5□□□□□ -0.89
RBFOX2-209ENST00000438146 SMIM26A0A096LP01 95 aa9.49□□□□□ -0.89
RBFOX2-209ENST00000438146 MUC12Q9UKN1 5478 aa9.48□□□□□ -0.89
RBFOX2-209ENST00000438146 KRTAP10-12P60413 245 aa9.48□□□□□ -0.89
RBFOX2-209ENST00000438146 NEBP20929 6669 aa9.44□□□□□ -0.9
RBFOX2-209ENST00000438146 SPRR2FQ96RM1 72 aa9.44□□□□□ -0.9
RBFOX2-209ENST00000438146 MDN1Q9NU22 5596 aa9.28□□□□□ -0.92
RBFOX2-209ENST00000438146 PCP4P48539 62 aa9.25□□□□□ -0.93
RBFOX2-209ENST00000438146 UQCR11O14957 56 aa9.24□□□□□ -0.93
RBFOX2-209ENST00000438146 SPRR2EP22531 72 aa9.23□□□□□ -0.93
RBFOX2-209ENST00000438146 SPRR2BP35325 72 aa9.23□□□□□ -0.93
RBFOX2-209ENST00000438146 SPRR2AP35326 72 aa9.23□□□□□ -0.93
RBFOX2-209ENST00000438146 PSPHP1O15172 72 aa9.17□□□□□ -0.94
RBFOX2-209ENST00000438146 V9GYY9 64 aa9.16□□□□□ -0.94
RBFOX2-209ENST00000438146 Q1T7F1 81 aa9.13□□□□□ -0.95
RBFOX2-209ENST00000438146 LCE1AQ5T7P2 110 aa9.12□□□□□ -0.95
RBFOX2-209ENST00000438146 MIR22HGQ0VDD5 57 aa9.1□□□□□ -0.95
RBFOX2-209ENST00000438146 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
RBFOX2-209ENST00000438146 KRTAP20-1Q3LI63 56 aa9.03□□□□□ -0.96
RBFOX2-209ENST00000438146 TNP1P09430 55 aa8.94□□□□□ -0.98
RBFOX2-209ENST00000438146 RPS28P62857 69 aaKnown RBP8.94□□□□□ -0.98
RBFOX2-209ENST00000438146 KRTAP19-7Q3SYF9 63 aa8.94□□□□□ -0.98
RBFOX2-209ENST00000438146 SPRR2DP22532 72 aa8.9□□□□□ -0.98
RBFOX2-209ENST00000438146 A6NED7 52 aa8.86□□□□□ -0.99
RBFOX2-209ENST00000438146 KRTAP2-3P0C7H8 128 aa8.86□□□□□ -0.99
RBFOX2-209ENST00000438146 KRTAP2-4Q9BYR9 128 aa8.86□□□□□ -0.99
RBFOX2-209ENST00000438146 MT1EP04732 61 aa8.85□□□□□ -0.99
RBFOX2-209ENST00000438146 KRTAP19-5Q3LI72 72 aa8.84□□□□□ -0.99
RBFOX2-209ENST00000438146 K7ERS5 55 aa8.83□□□□□ -1
RBFOX2-209ENST00000438146 LCE3AQ5TA76 89 aa8.82□□□□□ -1
RBFOX2-209ENST00000438146 KRTAP19-3Q7Z4W3 81 aa8.69□□□□□ -1.02
RBFOX2-209ENST00000438146 LCE5AQ5TCM9 118 aa8.65□□□□□ -1.02
RBFOX2-209ENST00000438146 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
RBFOX2-209ENST00000438146 KRTAP2-2Q9BYT5 123 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms