RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 A0A1B0GVX0 72 aa6.23□□□□□ -1.41
SNHG3-202ENST00000437681 A8MWP4 228 aa6.23□□□□□ -1.41
SNHG3-202ENST00000437681 A8MUU9 505 aa6.22□□□□□ -1.41
SNHG3-202ENST00000437681 H3BPC8 53 aa6.22□□□□□ -1.41
SNHG3-202ENST00000437681 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
SNHG3-202ENST00000437681 LPAP08519 4548 aa6.18□□□□□ -1.42
SNHG3-202ENST00000437681 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
SNHG3-202ENST00000437681 LRP2P98164 4655 aa6.17□□□□□ -1.42
SNHG3-202ENST00000437681 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
SNHG3-202ENST00000437681 PCOTHQ58A44 107 aa6.12□□□□□ -1.43
SNHG3-202ENST00000437681 HRES1P13985 223 aa6.09□□□□□ -1.43
SNHG3-202ENST00000437681 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
SNHG3-202ENST00000437681 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
SNHG3-202ENST00000437681 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
SNHG3-202ENST00000437681 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
SNHG3-202ENST00000437681 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
SNHG3-202ENST00000437681 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
SNHG3-202ENST00000437681 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
SNHG3-202ENST00000437681 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
SNHG3-202ENST00000437681 TP53AIP1Q9HCN2 124 aa5.99□□□□□ -1.45
SNHG3-202ENST00000437681 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
SNHG3-202ENST00000437681 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
SNHG3-202ENST00000437681 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
SNHG3-202ENST00000437681 A0A1B0GU69 56 aa5.89□□□□□ -1.47
SNHG3-202ENST00000437681 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
SNHG3-202ENST00000437681 UQCR11O14957 56 aa5.85□□□□□ -1.47
SNHG3-202ENST00000437681 ACYP2P14621 99 aa5.85□□□□□ -1.47
SNHG3-202ENST00000437681 K7ERS5 55 aa5.83□□□□□ -1.48
SNHG3-202ENST00000437681 Q5W150 140 aa5.82□□□□□ -1.48
SNHG3-202ENST00000437681 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
SNHG3-202ENST00000437681 COX6B2Q6YFQ2 88 aa5.81□□□□□ -1.48
SNHG3-202ENST00000437681 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
SNHG3-202ENST00000437681 MT1HP80294 61 aa5.79□□□□□ -1.48
SNHG3-202ENST00000437681 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
SNHG3-202ENST00000437681 FLGP20930 4061 aaPredicted RBP5.77□□□□□ -1.49
SNHG3-202ENST00000437681 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
SNHG3-202ENST00000437681 MUC2Q02817 5179 aa5.74□□□□□ -1.49
SNHG3-202ENST00000437681 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
SNHG3-202ENST00000437681 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
SNHG3-202ENST00000437681 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
SNHG3-202ENST00000437681 H1FX-AS1Q4G0G2 97 aa5.71□□□□□ -1.5
SNHG3-202ENST00000437681 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.5
SNHG3-202ENST00000437681 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
SNHG3-202ENST00000437681 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
SNHG3-202ENST00000437681 M0R2T5 61 aa5.63□□□□□ -1.51
SNHG3-202ENST00000437681 H0YAA0 97 aa5.58□□□□□ -1.52
SNHG3-202ENST00000437681 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
SNHG3-202ENST00000437681 S4R3F8 94 aa5.54□□□□□ -1.52
SNHG3-202ENST00000437681 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
SNHG3-202ENST00000437681 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
SNHG3-202ENST00000437681 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
SNHG3-202ENST00000437681 MT2AP02795 61 aa5.46□□□□□ -1.53
SNHG3-202ENST00000437681 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
SNHG3-202ENST00000437681 A0A1B0GU33 70 aa5.43□□□□□ -1.54
SNHG3-202ENST00000437681 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
SNHG3-202ENST00000437681 MT1FP04733 61 aa5.39□□□□□ -1.55
SNHG3-202ENST00000437681 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
SNHG3-202ENST00000437681 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
SNHG3-202ENST00000437681 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SNHG3-202ENST00000437681 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
SNHG3-202ENST00000437681 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
SNHG3-202ENST00000437681 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
SNHG3-202ENST00000437681 LCE2BO14633 110 aa5.21□□□□□ -1.58
SNHG3-202ENST00000437681 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
SNHG3-202ENST00000437681 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
SNHG3-202ENST00000437681 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
SNHG3-202ENST00000437681 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
SNHG3-202ENST00000437681 A0A0D9SG42 100 aa5.12□□□□□ -1.59
SNHG3-202ENST00000437681 M0QZ58 72 aa5.09□□□□□ -1.59
SNHG3-202ENST00000437681 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
SNHG3-202ENST00000437681 R4GN34 69 aa5.07□□□□□ -1.6
SNHG3-202ENST00000437681 USH2AO75445 5202 aa5.07□□□□□ -1.6
SNHG3-202ENST00000437681 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
SNHG3-202ENST00000437681 MT1BP07438 61 aa5.05□□□□□ -1.6
SNHG3-202ENST00000437681 KRTAP12-2P59991 146 aa5□□□□□ -1.61
SNHG3-202ENST00000437681 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
SNHG3-202ENST00000437681 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
SNHG3-202ENST00000437681 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
SNHG3-202ENST00000437681 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
SNHG3-202ENST00000437681 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
SNHG3-202ENST00000437681 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
SNHG3-202ENST00000437681 MT1XP80297 61 aa4.8□□□□□ -1.64
SNHG3-202ENST00000437681 FSIP2Q5CZC0 6907 aa4.73□□□□□ -1.65
SNHG3-202ENST00000437681 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
SNHG3-202ENST00000437681 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SNHG3-202ENST00000437681 INE1O15225 51 aa4.68□□□□□ -1.66
SNHG3-202ENST00000437681 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
SNHG3-202ENST00000437681 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
SNHG3-202ENST00000437681 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
SNHG3-202ENST00000437681 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SNHG3-202ENST00000437681 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
SNHG3-202ENST00000437681 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
SNHG3-202ENST00000437681 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
SNHG3-202ENST00000437681 TNP1P09430 55 aa4.45□□□□□ -1.7
SNHG3-202ENST00000437681 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
SNHG3-202ENST00000437681 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
SNHG3-202ENST00000437681 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
SNHG3-202ENST00000437681 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
SNHG3-202ENST00000437681 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SNHG3-202ENST00000437681 NEBP20929 6669 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms