RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MP68P56378 58 aa3.65□□□□□ -1.83
LSM3P3-201ENST00000436601 SPINK7P58062 85 aa3.65□□□□□ -1.83
LSM3P3-201ENST00000436601 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.83
LSM3P3-201ENST00000436601 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
LSM3P3-201ENST00000436601 H3BPC8 53 aa3.64□□□□□ -1.83
LSM3P3-201ENST00000436601 CYP4F30PQ9H0H9 118 aa3.64□□□□□ -1.83
LSM3P3-201ENST00000436601 LOC101927531A0A1B0GV80 90 aa3.63□□□□□ -1.83
LSM3P3-201ENST00000436601 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
LSM3P3-201ENST00000436601 LRP2P98164 4655 aa3.63□□□□□ -1.83
LSM3P3-201ENST00000436601 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
LSM3P3-201ENST00000436601 SNURFQ9Y675 71 aa3.62□□□□□ -1.83
LSM3P3-201ENST00000436601 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
LSM3P3-201ENST00000436601 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
LSM3P3-201ENST00000436601 HRES1P13985 223 aa3.6□□□□□ -1.83
LSM3P3-201ENST00000436601 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
LSM3P3-201ENST00000436601 C4orf26Q17RF5 130 aa3.57□□□□□ -1.84
LSM3P3-201ENST00000436601 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
LSM3P3-201ENST00000436601 H7BZZ5 65 aa3.55□□□□□ -1.84
LSM3P3-201ENST00000436601 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
LSM3P3-201ENST00000436601 NDUFC1O43677 76 aa3.54□□□□□ -1.84
LSM3P3-201ENST00000436601 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
LSM3P3-201ENST00000436601 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
LSM3P3-201ENST00000436601 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
LSM3P3-201ENST00000436601 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
LSM3P3-201ENST00000436601 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
LSM3P3-201ENST00000436601 DMAC1Q96GE9 116 aa3.49□□□□□ -1.85
LSM3P3-201ENST00000436601 FAM236DA0A1B0GTK5 79 aa3.48□□□□□ -1.85
LSM3P3-201ENST00000436601 FAM236CP0DP71 79 aa3.48□□□□□ -1.85
LSM3P3-201ENST00000436601 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
LSM3P3-201ENST00000436601 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
LSM3P3-201ENST00000436601 MUC2Q02817 5179 aa3.47□□□□□ -1.85
LSM3P3-201ENST00000436601 A8MUN3 132 aa3.47□□□□□ -1.85
LSM3P3-201ENST00000436601 TMEM258P61165 79 aa3.46□□□□□ -1.86
LSM3P3-201ENST00000436601 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
LSM3P3-201ENST00000436601 ACYP2P14621 99 aa3.44□□□□□ -1.86
LSM3P3-201ENST00000436601 MT1HP80294 61 aa3.43□□□□□ -1.86
LSM3P3-201ENST00000436601 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
LSM3P3-201ENST00000436601 LCA10Q71F78 164 aa3.42□□□□□ -1.86
LSM3P3-201ENST00000436601 S4R3F8 94 aa3.41□□□□□ -1.86
LSM3P3-201ENST00000436601 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
LSM3P3-201ENST00000436601 COA5Q86WW8 74 aa3.4□□□□□ -1.87
LSM3P3-201ENST00000436601 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
LSM3P3-201ENST00000436601 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
LSM3P3-201ENST00000436601 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
LSM3P3-201ENST00000436601 M0R2T5 61 aa3.35□□□□□ -1.87
LSM3P3-201ENST00000436601 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
LSM3P3-201ENST00000436601 RPS28P62857 69 aaKnown RBP3.33□□□□□ -1.88
LSM3P3-201ENST00000436601 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
LSM3P3-201ENST00000436601 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
LSM3P3-201ENST00000436601 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
LSM3P3-201ENST00000436601 H0YAA0 97 aa3.28□□□□□ -1.88
LSM3P3-201ENST00000436601 MT2AP02795 61 aa3.27□□□□□ -1.89
LSM3P3-201ENST00000436601 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
LSM3P3-201ENST00000436601 SMIM26A0A096LP01 95 aa3.26□□□□□ -1.89
LSM3P3-201ENST00000436601 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
LSM3P3-201ENST00000436601 MT1FP04733 61 aa3.25□□□□□ -1.89
LSM3P3-201ENST00000436601 V9GYY9 64 aa3.25□□□□□ -1.89
LSM3P3-201ENST00000436601 P0C880 135 aa3.24□□□□□ -1.89
LSM3P3-201ENST00000436601 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
LSM3P3-201ENST00000436601 Q1T7F1 81 aa3.23□□□□□ -1.89
LSM3P3-201ENST00000436601 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
LSM3P3-201ENST00000436601 A0A1B0GU69 56 aa3.21□□□□□ -1.9
LSM3P3-201ENST00000436601 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
LSM3P3-201ENST00000436601 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
LSM3P3-201ENST00000436601 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
LSM3P3-201ENST00000436601 A8MU10 97 aa3.17□□□□□ -1.9
LSM3P3-201ENST00000436601 PSPHP1O15172 72 aa3.17□□□□□ -1.9
LSM3P3-201ENST00000436601 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
LSM3P3-201ENST00000436601 A0A1B0GU33 70 aa3.16□□□□□ -1.9
LSM3P3-201ENST00000436601 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
LSM3P3-201ENST00000436601 Q5VV11 94 aa3.15□□□□□ -1.91
LSM3P3-201ENST00000436601 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
LSM3P3-201ENST00000436601 M0QZ58 72 aa3.13□□□□□ -1.91
LSM3P3-201ENST00000436601 R4GN34 69 aa3.13□□□□□ -1.91
LSM3P3-201ENST00000436601 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
LSM3P3-201ENST00000436601 UQCR11O14957 56 aa3.09□□□□□ -1.91
LSM3P3-201ENST00000436601 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
LSM3P3-201ENST00000436601 LINC01554Q52M75 96 aa3.07□□□□□ -1.92
LSM3P3-201ENST00000436601 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
LSM3P3-201ENST00000436601 A0A0D9SG42 100 aa3.06□□□□□ -1.92
LSM3P3-201ENST00000436601 A6NED7 52 aa3.06□□□□□ -1.92
LSM3P3-201ENST00000436601 MT1BP07438 61 aa3.06□□□□□ -1.92
LSM3P3-201ENST00000436601 MIR22HGQ0VDD5 57 aa3.06□□□□□ -1.92
LSM3P3-201ENST00000436601 PRO0628Q9UI54 55 aa3.05□□□□□ -1.92
LSM3P3-201ENST00000436601 A6NN06 94 aa3.03□□□□□ -1.92
LSM3P3-201ENST00000436601 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
LSM3P3-201ENST00000436601 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
LSM3P3-201ENST00000436601 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
LSM3P3-201ENST00000436601 PLAC4Q8WY50 150 aa2.99□□□□□ -1.93
LSM3P3-201ENST00000436601 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
LSM3P3-201ENST00000436601 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
LSM3P3-201ENST00000436601 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
LSM3P3-201ENST00000436601 USH2AO75445 5202 aa2.95□□□□□ -1.94
LSM3P3-201ENST00000436601 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
LSM3P3-201ENST00000436601 MT1XP80297 61 aa2.93□□□□□ -1.94
LSM3P3-201ENST00000436601 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
LSM3P3-201ENST00000436601 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
LSM3P3-201ENST00000436601 K7ERS5 55 aa2.91□□□□□ -1.94
LSM3P3-201ENST00000436601 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
LSM3P3-201ENST00000436601 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms