RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
HMGN1-207ENST00000436324 A0A087WVE0 104 aa8.33□□□□□ -1.08
HMGN1-207ENST00000436324 UQCRQO14949 82 aa8.33□□□□□ -1.08
HMGN1-207ENST00000436324 H0Y9P7 68 aa8.32□□□□□ -1.08
HMGN1-207ENST00000436324 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
HMGN1-207ENST00000436324 A0A1B0GV90 55 aa8.31□□□□□ -1.08
HMGN1-207ENST00000436324 LINC00643Q86TS7 51 aa8.3□□□□□ -1.08
HMGN1-207ENST00000436324 ATOX1O00244 68 aa8.26□□□□□ -1.09
HMGN1-207ENST00000436324 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
HMGN1-207ENST00000436324 Q5VV11 94 aa8.21□□□□□ -1.1
HMGN1-207ENST00000436324 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
HMGN1-207ENST00000436324 MT1BP07438 61 aa8.2□□□□□ -1.1
HMGN1-207ENST00000436324 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
HMGN1-207ENST00000436324 KRTAP19-8Q3LI54 63 aa8.16□□□□□ -1.1
HMGN1-207ENST00000436324 NDUFC1O43677 76 aa8.15□□□□□ -1.1
HMGN1-207ENST00000436324 MACF1Q9UPN3 7388 aaKnown RBP8.15□□□□□ -1.11
HMGN1-207ENST00000436324 OCR1Q9BZK8 76 aa8.14□□□□□ -1.11
HMGN1-207ENST00000436324 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
HMGN1-207ENST00000436324 MP68P56378 58 aa8.13□□□□□ -1.11
HMGN1-207ENST00000436324 A6NN06 94 aa8.12□□□□□ -1.11
HMGN1-207ENST00000436324 LCE1DQ5T752 114 aa8.12□□□□□ -1.11
HMGN1-207ENST00000436324 LCE4AQ5TA78 99 aa8.12□□□□□ -1.11
HMGN1-207ENST00000436324 IMUPQ9GZP8 106 aa8.12□□□□□ -1.11
HMGN1-207ENST00000436324 A8MUN3 132 aa8.09□□□□□ -1.11
HMGN1-207ENST00000436324 J3QR89 54 aa8.08□□□□□ -1.12
HMGN1-207ENST00000436324 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
HMGN1-207ENST00000436324 KRTAP6-3Q3LI67 103 aa8.04□□□□□ -1.12
HMGN1-207ENST00000436324 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
HMGN1-207ENST00000436324 H0YAA0 97 aa8.02□□□□□ -1.13
HMGN1-207ENST00000436324 SCGB1A1P11684 91 aa8.02□□□□□ -1.13
HMGN1-207ENST00000436324 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
HMGN1-207ENST00000436324 KRTAP4-7Q9BYR0 210 aa8.01□□□□□ -1.13
HMGN1-207ENST00000436324 KRTAP10-5P60370 271 aa8□□□□□ -1.13
HMGN1-207ENST00000436324 H3BPC8 53 aa7.97□□□□□ -1.13
HMGN1-207ENST00000436324 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
HMGN1-207ENST00000436324 KRTAP4-9Q9BYQ8 210 aa7.87□□□□□ -1.15
HMGN1-207ENST00000436324 MT-ATP8P03928 68 aa7.85□□□□□ -1.15
HMGN1-207ENST00000436324 P0C880 135 aa7.83□□□□□ -1.16
HMGN1-207ENST00000436324 R4GN34 69 aa7.79□□□□□ -1.16
HMGN1-207ENST00000436324 K7ERU9 68 aa7.77□□□□□ -1.17
HMGN1-207ENST00000436324 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
HMGN1-207ENST00000436324 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
HMGN1-207ENST00000436324 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
HMGN1-207ENST00000436324 M0QZ58 72 aa7.75□□□□□ -1.17
HMGN1-207ENST00000436324 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
HMGN1-207ENST00000436324 ACYP2P14621 99 aa7.72□□□□□ -1.17
HMGN1-207ENST00000436324 NEBP20929 6669 aa7.69□□□□□ -1.18
HMGN1-207ENST00000436324 MT1XP80297 61 aa7.69□□□□□ -1.18
HMGN1-207ENST00000436324 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
HMGN1-207ENST00000436324 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
HMGN1-207ENST00000436324 KRTAP4-2Q9BYR5 136 aa7.68□□□□□ -1.18
HMGN1-207ENST00000436324 SNURFQ9Y675 71 aa7.65□□□□□ -1.18
HMGN1-207ENST00000436324 KRTAP5-9P26371 169 aa7.64□□□□□ -1.19
HMGN1-207ENST00000436324 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
HMGN1-207ENST00000436324 SPTSSBQ8NFR3 76 aa7.62□□□□□ -1.19
HMGN1-207ENST00000436324 KRTAP4-11Q9BYQ6 195 aa7.62□□□□□ -1.19
HMGN1-207ENST00000436324 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
HMGN1-207ENST00000436324 MUC12Q9UKN1 5478 aa7.61□□□□□ -1.19
HMGN1-207ENST00000436324 KMT2DO14686 5537 aa7.5□□□□□ -1.21
HMGN1-207ENST00000436324 SERP2Q8N6R1 65 aa7.49□□□□□ -1.21
HMGN1-207ENST00000436324 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
HMGN1-207ENST00000436324 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
HMGN1-207ENST00000436324 SPANXA2-OT1Q8N9U9 137 aa7.47□□□□□ -1.21
HMGN1-207ENST00000436324 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
HMGN1-207ENST00000436324 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
HMGN1-207ENST00000436324 MDN1Q9NU22 5596 aa7.4□□□□□ -1.23
HMGN1-207ENST00000436324 SPRR2EP22531 72 aa7.38□□□□□ -1.23
HMGN1-207ENST00000436324 SPRR2BP35325 72 aa7.38□□□□□ -1.23
HMGN1-207ENST00000436324 SPRR2AP35326 72 aa7.38□□□□□ -1.23
HMGN1-207ENST00000436324 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-207ENST00000436324 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
HMGN1-207ENST00000436324 COA5Q86WW8 74 aa7.31□□□□□ -1.24
HMGN1-207ENST00000436324 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
HMGN1-207ENST00000436324 KRTAP2-3P0C7H8 128 aa7.26□□□□□ -1.25
HMGN1-207ENST00000436324 COX7CP15954 63 aa7.26□□□□□ -1.25
HMGN1-207ENST00000436324 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
HMGN1-207ENST00000436324 KRTAP2-4Q9BYR9 128 aa7.26□□□□□ -1.25
HMGN1-207ENST00000436324 SEC61GP60059 68 aa7.19□□□□□ -1.26
HMGN1-207ENST00000436324 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
HMGN1-207ENST00000436324 SERP1Q9Y6X1 66 aa7.18□□□□□ -1.26
HMGN1-207ENST00000436324 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
HMGN1-207ENST00000436324 H7BZZ5 65 aa7.15□□□□□ -1.26
HMGN1-207ENST00000436324 A0A0D9SG42 100 aa7.14□□□□□ -1.27
HMGN1-207ENST00000436324 SPRR2DP22532 72 aa7.13□□□□□ -1.27
HMGN1-207ENST00000436324 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
HMGN1-207ENST00000436324 A0A1B0GU33 70 aa7.06□□□□□ -1.28
HMGN1-207ENST00000436324 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
HMGN1-207ENST00000436324 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
HMGN1-207ENST00000436324 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
HMGN1-207ENST00000436324 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
HMGN1-207ENST00000436324 A0A1B0GU69 56 aa6.94□□□□□ -1.3
HMGN1-207ENST00000436324 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
HMGN1-207ENST00000436324 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
HMGN1-207ENST00000436324 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
HMGN1-207ENST00000436324 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
HMGN1-207ENST00000436324 A8MU10 97 aa6.85□□□□□ -1.31
HMGN1-207ENST00000436324 MT1EP04732 61 aa6.82□□□□□ -1.32
HMGN1-207ENST00000436324 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
HMGN1-207ENST00000436324 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
HMGN1-207ENST00000436324 KRTAP19-3Q7Z4W3 81 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms