RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 XP32Q5T750 250 aa7.45□□□□□ -1.22
RTN1-204ENST00000432103 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
RTN1-204ENST00000432103 Q5W150 140 aa7.4□□□□□ -1.22
RTN1-204ENST00000432103 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
RTN1-204ENST00000432103 IGKV2-30P06310 120 aa7.33□□□□□ -1.24
RTN1-204ENST00000432103 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
RTN1-204ENST00000432103 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
RTN1-204ENST00000432103 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
RTN1-204ENST00000432103 A0A1B0GU69 56 aa7.28□□□□□ -1.24
RTN1-204ENST00000432103 UQCR11O14957 56 aa7.22□□□□□ -1.25
RTN1-204ENST00000432103 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
RTN1-204ENST00000432103 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.26
RTN1-204ENST00000432103 LPAP08519 4548 aa7.15□□□□□ -1.26
RTN1-204ENST00000432103 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
RTN1-204ENST00000432103 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
RTN1-204ENST00000432103 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
RTN1-204ENST00000432103 LRP2P98164 4655 aa7.11□□□□□ -1.27
RTN1-204ENST00000432103 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
RTN1-204ENST00000432103 COX6B2Q6YFQ2 88 aa7.07□□□□□ -1.28
RTN1-204ENST00000432103 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
RTN1-204ENST00000432103 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
RTN1-204ENST00000432103 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
RTN1-204ENST00000432103 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
RTN1-204ENST00000432103 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
RTN1-204ENST00000432103 RNF213Q63HN8 5207 aa6.92□□□□□ -1.3
RTN1-204ENST00000432103 S4R3F8 94 aa6.87□□□□□ -1.31
RTN1-204ENST00000432103 H0YAA0 97 aa6.86□□□□□ -1.31
RTN1-204ENST00000432103 A0A1B0GU33 70 aa6.84□□□□□ -1.31
RTN1-204ENST00000432103 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
RTN1-204ENST00000432103 KRTAP19-2Q3LHN2 52 aa6.78□□□□□ -1.32
RTN1-204ENST00000432103 MUC2Q02817 5179 aa6.74□□□□□ -1.33
RTN1-204ENST00000432103 K7ERS5 55 aa6.73□□□□□ -1.33
RTN1-204ENST00000432103 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
RTN1-204ENST00000432103 H3BS24 57 aa6.7□□□□□ -1.34
RTN1-204ENST00000432103 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
RTN1-204ENST00000432103 ROMO1P60602 79 aa6.67□□□□□ -1.34
RTN1-204ENST00000432103 M0R2T5 61 aa6.61□□□□□ -1.35
RTN1-204ENST00000432103 MT1HP80294 61 aa6.59□□□□□ -1.35
RTN1-204ENST00000432103 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
RTN1-204ENST00000432103 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
RTN1-204ENST00000432103 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
RTN1-204ENST00000432103 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.37
RTN1-204ENST00000432103 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
RTN1-204ENST00000432103 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
RTN1-204ENST00000432103 P0C880 135 aa6.42□□□□□ -1.38
RTN1-204ENST00000432103 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
RTN1-204ENST00000432103 M0QZ58 72 aa6.37□□□□□ -1.39
RTN1-204ENST00000432103 A0A0D9SG42 100 aa6.35□□□□□ -1.39
RTN1-204ENST00000432103 R4GN34 69 aa6.35□□□□□ -1.39
RTN1-204ENST00000432103 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
RTN1-204ENST00000432103 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
RTN1-204ENST00000432103 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
RTN1-204ENST00000432103 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
RTN1-204ENST00000432103 MT2AP02795 61 aa6.3□□□□□ -1.4
RTN1-204ENST00000432103 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
RTN1-204ENST00000432103 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
RTN1-204ENST00000432103 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
RTN1-204ENST00000432103 MT1FP04733 61 aa6.25□□□□□ -1.41
RTN1-204ENST00000432103 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
RTN1-204ENST00000432103 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
RTN1-204ENST00000432103 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
RTN1-204ENST00000432103 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
RTN1-204ENST00000432103 NDUFAF8A1L188 74 aa6.11□□□□□ -1.43
RTN1-204ENST00000432103 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
RTN1-204ENST00000432103 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
RTN1-204ENST00000432103 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
RTN1-204ENST00000432103 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
RTN1-204ENST00000432103 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
RTN1-204ENST00000432103 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
RTN1-204ENST00000432103 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
RTN1-204ENST00000432103 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
RTN1-204ENST00000432103 LCE2BO14633 110 aa5.92□□□□□ -1.46
RTN1-204ENST00000432103 MT1BP07438 61 aa5.89□□□□□ -1.47
RTN1-204ENST00000432103 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
RTN1-204ENST00000432103 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
RTN1-204ENST00000432103 USH2AO75445 5202 aa5.69□□□□□ -1.5
RTN1-204ENST00000432103 MT1XP80297 61 aa5.69□□□□□ -1.5
RTN1-204ENST00000432103 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
RTN1-204ENST00000432103 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
RTN1-204ENST00000432103 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
RTN1-204ENST00000432103 TNP1P09430 55 aa5.65□□□□□ -1.51
RTN1-204ENST00000432103 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.51
RTN1-204ENST00000432103 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
RTN1-204ENST00000432103 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
RTN1-204ENST00000432103 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
RTN1-204ENST00000432103 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
RTN1-204ENST00000432103 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
RTN1-204ENST00000432103 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
RTN1-204ENST00000432103 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
RTN1-204ENST00000432103 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
RTN1-204ENST00000432103 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
RTN1-204ENST00000432103 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
RTN1-204ENST00000432103 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
RTN1-204ENST00000432103 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
RTN1-204ENST00000432103 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
RTN1-204ENST00000432103 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
RTN1-204ENST00000432103 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
RTN1-204ENST00000432103 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
RTN1-204ENST00000432103 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
RTN1-204ENST00000432103 INE1O15225 51 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms