RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 MT1FP04733 61 aa5.79□□□□□ -1.48
TRERNA1-201ENST00000431460 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
TRERNA1-201ENST00000431460 H3BPC8 53 aa5.78□□□□□ -1.48
TRERNA1-201ENST00000431460 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
TRERNA1-201ENST00000431460 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
TRERNA1-201ENST00000431460 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
TRERNA1-201ENST00000431460 TMEM258P61165 79 aa5.75□□□□□ -1.49
TRERNA1-201ENST00000431460 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
TRERNA1-201ENST00000431460 LCE2BO14633 110 aa5.69□□□□□ -1.5
TRERNA1-201ENST00000431460 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
TRERNA1-201ENST00000431460 COX7CP15954 63 aa5.68□□□□□ -1.5
TRERNA1-201ENST00000431460 S4R3F8 94 aa5.68□□□□□ -1.5
TRERNA1-201ENST00000431460 A8MUN3 132 aa5.66□□□□□ -1.5
TRERNA1-201ENST00000431460 USH2AO75445 5202 aa5.65□□□□□ -1.5
TRERNA1-201ENST00000431460 A0A0A0MQY5 61 aa5.65□□□□□ -1.5
TRERNA1-201ENST00000431460 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
TRERNA1-201ENST00000431460 LCA10Q71F78 164 aa5.64□□□□□ -1.51
TRERNA1-201ENST00000431460 CSAG1Q6PB30 78 aa5.62□□□□□ -1.51
TRERNA1-201ENST00000431460 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
TRERNA1-201ENST00000431460 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
TRERNA1-201ENST00000431460 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
TRERNA1-201ENST00000431460 SERP1Q9Y6X1 66 aa5.59□□□□□ -1.51
TRERNA1-201ENST00000431460 DMAC1Q96GE9 116 aa5.58□□□□□ -1.52
TRERNA1-201ENST00000431460 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
TRERNA1-201ENST00000431460 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
TRERNA1-201ENST00000431460 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
TRERNA1-201ENST00000431460 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
TRERNA1-201ENST00000431460 NDUFC1O43677 76 aa5.55□□□□□ -1.52
TRERNA1-201ENST00000431460 ACYP2P14621 99 aa5.5□□□□□ -1.53
TRERNA1-201ENST00000431460 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
TRERNA1-201ENST00000431460 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
TRERNA1-201ENST00000431460 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
TRERNA1-201ENST00000431460 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
TRERNA1-201ENST00000431460 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
TRERNA1-201ENST00000431460 H0YAA0 97 aa5.45□□□□□ -1.54
TRERNA1-201ENST00000431460 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
TRERNA1-201ENST00000431460 H7BZZ5 65 aa5.4□□□□□ -1.54
TRERNA1-201ENST00000431460 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
TRERNA1-201ENST00000431460 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
TRERNA1-201ENST00000431460 CHKB-CPT1BH3BT56 60 aa5.38□□□□□ -1.55
TRERNA1-201ENST00000431460 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
TRERNA1-201ENST00000431460 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
TRERNA1-201ENST00000431460 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
TRERNA1-201ENST00000431460 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
TRERNA1-201ENST00000431460 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
TRERNA1-201ENST00000431460 Q5VV11 94 aa5.32□□□□□ -1.56
TRERNA1-201ENST00000431460 MT1BP07438 61 aa5.31□□□□□ -1.56
TRERNA1-201ENST00000431460 COA5Q86WW8 74 aa5.31□□□□□ -1.56
TRERNA1-201ENST00000431460 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
TRERNA1-201ENST00000431460 P0C880 135 aa5.28□□□□□ -1.56
TRERNA1-201ENST00000431460 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
TRERNA1-201ENST00000431460 A6NN06 94 aa5.26□□□□□ -1.57
TRERNA1-201ENST00000431460 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
TRERNA1-201ENST00000431460 Q1T7F1 81 aa5.23□□□□□ -1.57
TRERNA1-201ENST00000431460 R4GN34 69 aa5.22□□□□□ -1.57
TRERNA1-201ENST00000431460 M0QZ58 72 aa5.17□□□□□ -1.58
TRERNA1-201ENST00000431460 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
TRERNA1-201ENST00000431460 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
TRERNA1-201ENST00000431460 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
TRERNA1-201ENST00000431460 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
TRERNA1-201ENST00000431460 A0A1B0GU69 56 aa5.04□□□□□ -1.6
TRERNA1-201ENST00000431460 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
TRERNA1-201ENST00000431460 A0A1B0GU33 70 aa5.02□□□□□ -1.61
TRERNA1-201ENST00000431460 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
TRERNA1-201ENST00000431460 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
TRERNA1-201ENST00000431460 MT1XP80297 61 aa4.98□□□□□ -1.61
TRERNA1-201ENST00000431460 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
TRERNA1-201ENST00000431460 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
TRERNA1-201ENST00000431460 PSPHP1O15172 72 aa4.96□□□□□ -1.62
TRERNA1-201ENST00000431460 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
TRERNA1-201ENST00000431460 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
TRERNA1-201ENST00000431460 NEBP20929 6669 aa4.91□□□□□ -1.62
TRERNA1-201ENST00000431460 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
TRERNA1-201ENST00000431460 A0A0D9SG42 100 aa4.89□□□□□ -1.63
TRERNA1-201ENST00000431460 A6NED7 52 aa4.88□□□□□ -1.63
TRERNA1-201ENST00000431460 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
TRERNA1-201ENST00000431460 KMT2DO14686 5537 aa4.86□□□□□ -1.63
TRERNA1-201ENST00000431460 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
TRERNA1-201ENST00000431460 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
TRERNA1-201ENST00000431460 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
TRERNA1-201ENST00000431460 A8MU10 97 aa4.82□□□□□ -1.64
TRERNA1-201ENST00000431460 UQCR11O14957 56 aa4.82□□□□□ -1.64
TRERNA1-201ENST00000431460 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
TRERNA1-201ENST00000431460 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
TRERNA1-201ENST00000431460 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
TRERNA1-201ENST00000431460 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
TRERNA1-201ENST00000431460 SPRR2EP22531 72 aa4.79□□□□□ -1.64
TRERNA1-201ENST00000431460 SPRR2BP35325 72 aa4.79□□□□□ -1.64
TRERNA1-201ENST00000431460 SPRR2AP35326 72 aa4.79□□□□□ -1.64
TRERNA1-201ENST00000431460 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
TRERNA1-201ENST00000431460 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
TRERNA1-201ENST00000431460 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
TRERNA1-201ENST00000431460 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
TRERNA1-201ENST00000431460 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
TRERNA1-201ENST00000431460 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
TRERNA1-201ENST00000431460 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
TRERNA1-201ENST00000431460 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
TRERNA1-201ENST00000431460 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
TRERNA1-201ENST00000431460 ROMO1P60602 79 aa4.64□□□□□ -1.67
TRERNA1-201ENST00000431460 SPRR2DP22532 72 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms