RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
USHBP1-203ENST00000431146 XP32Q5T750 250 aa8.88□□□□□ -0.99
USHBP1-203ENST00000431146 HERC2O95714 4834 aa8.86□□□□□ -0.99
USHBP1-203ENST00000431146 ACYP2P14621 99 aa8.86□□□□□ -0.99
USHBP1-203ENST00000431146 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
USHBP1-203ENST00000431146 LPAP08519 4548 aa8.82□□□□□ -1
USHBP1-203ENST00000431146 CSAG1Q6PB30 78 aa8.8□□□□□ -1
USHBP1-203ENST00000431146 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
USHBP1-203ENST00000431146 LRP2P98164 4655 aa8.78□□□□□ -1
USHBP1-203ENST00000431146 J3QL48 77 aa8.75□□□□□ -1.01
USHBP1-203ENST00000431146 ROMO1P60602 79 aa8.72□□□□□ -1.01
USHBP1-203ENST00000431146 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
USHBP1-203ENST00000431146 KRTAP3-1Q9BYR8 98 aa8.71□□□□□ -1.02
USHBP1-203ENST00000431146 A0A0A0MQY5 61 aa8.68□□□□□ -1.02
USHBP1-203ENST00000431146 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
USHBP1-203ENST00000431146 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
USHBP1-203ENST00000431146 PCLOQ9Y6V0 5065 aa8.59□□□□□ -1.03
USHBP1-203ENST00000431146 UQCR11O14957 56 aa8.57□□□□□ -1.04
USHBP1-203ENST00000431146 A0A1B0GU69 56 aa8.54□□□□□ -1.04
USHBP1-203ENST00000431146 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
USHBP1-203ENST00000431146 HERC1Q15751 4861 aa8.49□□□□□ -1.05
USHBP1-203ENST00000431146 P0C880 135 aa8.44□□□□□ -1.06
USHBP1-203ENST00000431146 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
USHBP1-203ENST00000431146 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
USHBP1-203ENST00000431146 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
USHBP1-203ENST00000431146 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
USHBP1-203ENST00000431146 S4R3F8 94 aa8.36□□□□□ -1.07
USHBP1-203ENST00000431146 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
USHBP1-203ENST00000431146 HMCN2Q8NDA2 5059 aa8.32□□□□□ -1.08
USHBP1-203ENST00000431146 MUC2Q02817 5179 aa8.29□□□□□ -1.08
USHBP1-203ENST00000431146 A0A1B0GU33 70 aa8.15□□□□□ -1.11
USHBP1-203ENST00000431146 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
USHBP1-203ENST00000431146 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
USHBP1-203ENST00000431146 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
USHBP1-203ENST00000431146 H0YAA0 97 aa8.1□□□□□ -1.11
USHBP1-203ENST00000431146 NDUFAF8A1L188 74 aa8.08□□□□□ -1.12
USHBP1-203ENST00000431146 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
USHBP1-203ENST00000431146 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.13
USHBP1-203ENST00000431146 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
USHBP1-203ENST00000431146 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
USHBP1-203ENST00000431146 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
USHBP1-203ENST00000431146 RNF213Q63HN8 5207 aa7.96□□□□□ -1.14
USHBP1-203ENST00000431146 K7ERS5 55 aa7.93□□□□□ -1.14
USHBP1-203ENST00000431146 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
USHBP1-203ENST00000431146 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
USHBP1-203ENST00000431146 A0A0D9SG42 100 aa7.89□□□□□ -1.15
USHBP1-203ENST00000431146 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
USHBP1-203ENST00000431146 CRIPTQ9P021 101 aa7.84□□□□□ -1.16
USHBP1-203ENST00000431146 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
USHBP1-203ENST00000431146 M0QZ58 72 aa7.75□□□□□ -1.17
USHBP1-203ENST00000431146 R4GN34 69 aa7.73□□□□□ -1.17
USHBP1-203ENST00000431146 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
USHBP1-203ENST00000431146 MT1HP80294 61 aa7.67□□□□□ -1.18
USHBP1-203ENST00000431146 M0R2T5 61 aa7.65□□□□□ -1.18
USHBP1-203ENST00000431146 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
USHBP1-203ENST00000431146 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
USHBP1-203ENST00000431146 MT2AP02795 61 aa7.42□□□□□ -1.22
USHBP1-203ENST00000431146 KRTAP9-8Q9BYQ0 159 aa7.42□□□□□ -1.22
USHBP1-203ENST00000431146 MT1FP04733 61 aa7.4□□□□□ -1.22
USHBP1-203ENST00000431146 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
USHBP1-203ENST00000431146 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
USHBP1-203ENST00000431146 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
USHBP1-203ENST00000431146 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
USHBP1-203ENST00000431146 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
USHBP1-203ENST00000431146 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
USHBP1-203ENST00000431146 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
USHBP1-203ENST00000431146 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
USHBP1-203ENST00000431146 MT1BP07438 61 aa7.03□□□□□ -1.28
USHBP1-203ENST00000431146 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
USHBP1-203ENST00000431146 LCE2BO14633 110 aa6.94□□□□□ -1.3
USHBP1-203ENST00000431146 TNP1P09430 55 aa6.91□□□□□ -1.3
USHBP1-203ENST00000431146 USH2AO75445 5202 aa6.89□□□□□ -1.31
USHBP1-203ENST00000431146 MT1XP80297 61 aa6.86□□□□□ -1.31
USHBP1-203ENST00000431146 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
USHBP1-203ENST00000431146 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
USHBP1-203ENST00000431146 INE1O15225 51 aa6.68□□□□□ -1.34
USHBP1-203ENST00000431146 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
USHBP1-203ENST00000431146 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.35
USHBP1-203ENST00000431146 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.35
USHBP1-203ENST00000431146 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
USHBP1-203ENST00000431146 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
USHBP1-203ENST00000431146 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
USHBP1-203ENST00000431146 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
USHBP1-203ENST00000431146 KMT2DO14686 5537 aa6.51□□□□□ -1.37
USHBP1-203ENST00000431146 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
USHBP1-203ENST00000431146 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
USHBP1-203ENST00000431146 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
USHBP1-203ENST00000431146 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
USHBP1-203ENST00000431146 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
USHBP1-203ENST00000431146 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
USHBP1-203ENST00000431146 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
USHBP1-203ENST00000431146 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.41
USHBP1-203ENST00000431146 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
USHBP1-203ENST00000431146 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
USHBP1-203ENST00000431146 MT1EP04732 61 aa5.98□□□□□ -1.45
USHBP1-203ENST00000431146 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
USHBP1-203ENST00000431146 CRCT1Q9UGL9 99 aa5.92□□□□□ -1.46
USHBP1-203ENST00000431146 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
USHBP1-203ENST00000431146 MUC12Q9UKN1 5478 aa5.9□□□□□ -1.46
USHBP1-203ENST00000431146 MT1LQ93083 61 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms