RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
HDAC6-207ENST00000430858 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
HDAC6-207ENST00000430858 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
HDAC6-207ENST00000430858 OCR1Q9BZK8 76 aa4.47□□□□□ -1.69
HDAC6-207ENST00000430858 MP68P56378 58 aa4.46□□□□□ -1.7
HDAC6-207ENST00000430858 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
HDAC6-207ENST00000430858 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
HDAC6-207ENST00000430858 A8MUN3 132 aa4.45□□□□□ -1.7
HDAC6-207ENST00000430858 KLKP1Q107X0 134 aa4.45□□□□□ -1.7
HDAC6-207ENST00000430858 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
HDAC6-207ENST00000430858 NDUFC1O43677 76 aa4.43□□□□□ -1.7
HDAC6-207ENST00000430858 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
HDAC6-207ENST00000430858 H3BPC8 53 aa4.42□□□□□ -1.7
HDAC6-207ENST00000430858 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
HDAC6-207ENST00000430858 IMUPQ9GZP8 106 aa4.42□□□□□ -1.7
HDAC6-207ENST00000430858 SCGB1A1P11684 91 aa4.41□□□□□ -1.7
HDAC6-207ENST00000430858 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
HDAC6-207ENST00000430858 Q5VV11 94 aa4.4□□□□□ -1.71
HDAC6-207ENST00000430858 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
HDAC6-207ENST00000430858 H0YAA0 97 aa4.39□□□□□ -1.71
HDAC6-207ENST00000430858 MT1BP07438 61 aa4.38□□□□□ -1.71
HDAC6-207ENST00000430858 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
HDAC6-207ENST00000430858 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
HDAC6-207ENST00000430858 A6NN06 94 aa4.34□□□□□ -1.71
HDAC6-207ENST00000430858 K7ERU9 68 aa4.34□□□□□ -1.71
HDAC6-207ENST00000430858 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
HDAC6-207ENST00000430858 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
HDAC6-207ENST00000430858 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
HDAC6-207ENST00000430858 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
HDAC6-207ENST00000430858 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
HDAC6-207ENST00000430858 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
HDAC6-207ENST00000430858 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
HDAC6-207ENST00000430858 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
HDAC6-207ENST00000430858 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
HDAC6-207ENST00000430858 ACYP2P14621 99 aa4.24□□□□□ -1.73
HDAC6-207ENST00000430858 P0C880 135 aa4.22□□□□□ -1.73
HDAC6-207ENST00000430858 R4GN34 69 aa4.22□□□□□ -1.73
HDAC6-207ENST00000430858 SPTSSBQ8NFR3 76 aa4.19□□□□□ -1.74
HDAC6-207ENST00000430858 M0QZ58 72 aa4.18□□□□□ -1.74
HDAC6-207ENST00000430858 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
HDAC6-207ENST00000430858 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
HDAC6-207ENST00000430858 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
HDAC6-207ENST00000430858 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
HDAC6-207ENST00000430858 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
HDAC6-207ENST00000430858 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
HDAC6-207ENST00000430858 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
HDAC6-207ENST00000430858 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
HDAC6-207ENST00000430858 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.75
HDAC6-207ENST00000430858 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
HDAC6-207ENST00000430858 MT1XP80297 61 aa4.12□□□□□ -1.75
HDAC6-207ENST00000430858 NEBP20929 6669 aa4.11□□□□□ -1.75
HDAC6-207ENST00000430858 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
HDAC6-207ENST00000430858 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
HDAC6-207ENST00000430858 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
HDAC6-207ENST00000430858 COX7CP15954 63 aa4.04□□□□□ -1.76
HDAC6-207ENST00000430858 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
HDAC6-207ENST00000430858 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
HDAC6-207ENST00000430858 PCP4P48539 62 aa4.01□□□□□ -1.77
HDAC6-207ENST00000430858 COA5Q86WW8 74 aa4.01□□□□□ -1.77
HDAC6-207ENST00000430858 LCE1DQ5T752 114 aa4□□□□□ -1.77
HDAC6-207ENST00000430858 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
HDAC6-207ENST00000430858 KMT2DO14686 5537 aa3.98□□□□□ -1.77
HDAC6-207ENST00000430858 H7BZZ5 65 aa3.97□□□□□ -1.77
HDAC6-207ENST00000430858 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
HDAC6-207ENST00000430858 SEC61GP60059 68 aa3.95□□□□□ -1.78
HDAC6-207ENST00000430858 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
HDAC6-207ENST00000430858 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
HDAC6-207ENST00000430858 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
HDAC6-207ENST00000430858 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
HDAC6-207ENST00000430858 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
HDAC6-207ENST00000430858 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
HDAC6-207ENST00000430858 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
HDAC6-207ENST00000430858 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
HDAC6-207ENST00000430858 ANAPC13Q9BS18 74 aa3.91□□□□□ -1.78
HDAC6-207ENST00000430858 SPRR2EP22531 72 aa3.9□□□□□ -1.79
HDAC6-207ENST00000430858 SPRR2BP35325 72 aa3.9□□□□□ -1.79
HDAC6-207ENST00000430858 SPRR2AP35326 72 aa3.9□□□□□ -1.79
HDAC6-207ENST00000430858 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
HDAC6-207ENST00000430858 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
HDAC6-207ENST00000430858 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
HDAC6-207ENST00000430858 A0A1B0GU33 70 aa3.86□□□□□ -1.79
HDAC6-207ENST00000430858 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
HDAC6-207ENST00000430858 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
HDAC6-207ENST00000430858 A0A0D9SG42 100 aa3.84□□□□□ -1.79
HDAC6-207ENST00000430858 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
HDAC6-207ENST00000430858 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
HDAC6-207ENST00000430858 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
HDAC6-207ENST00000430858 A0A1B0GU69 56 aa3.82□□□□□ -1.8
HDAC6-207ENST00000430858 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
HDAC6-207ENST00000430858 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
HDAC6-207ENST00000430858 ATP5EP56381 51 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-207ENST00000430858 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
HDAC6-207ENST00000430858 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
HDAC6-207ENST00000430858 SPRR2DP22532 72 aa3.77□□□□□ -1.81
HDAC6-207ENST00000430858 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
HDAC6-207ENST00000430858 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
HDAC6-207ENST00000430858 PRR15LQ9BU68 103 aa3.73□□□□□ -1.81
HDAC6-207ENST00000430858 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
HDAC6-207ENST00000430858 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
HDAC6-207ENST00000430858 A8MU10 97 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms