RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.43
USP40-205ENST00000430158 C4orf26Q17RF5 130 aa6.07□□□□□ -1.44
USP40-205ENST00000430158 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
USP40-205ENST00000430158 H0Y9P7 68 aa6.05□□□□□ -1.44
USP40-205ENST00000430158 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
USP40-205ENST00000430158 ATOX1O00244 68 aa6.03□□□□□ -1.44
USP40-205ENST00000430158 C5orf47Q569G3 176 aa6□□□□□ -1.45
USP40-205ENST00000430158 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
USP40-205ENST00000430158 SCGB1A1P11684 91 aa5.98□□□□□ -1.45
USP40-205ENST00000430158 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
USP40-205ENST00000430158 FAM236AA0A1B0GUQ0 79 aa5.97□□□□□ -1.45
USP40-205ENST00000430158 FAM236BA0A1B0GV22 79 aa5.97□□□□□ -1.45
USP40-205ENST00000430158 MT2AP02795 61 aa5.97□□□□□ -1.45
USP40-205ENST00000430158 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
USP40-205ENST00000430158 H3BPC8 53 aa5.95□□□□□ -1.46
USP40-205ENST00000430158 MP68P56378 58 aa5.95□□□□□ -1.46
USP40-205ENST00000430158 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
USP40-205ENST00000430158 MT1FP04733 61 aa5.93□□□□□ -1.46
USP40-205ENST00000430158 SMIM20Q8N5G0 67 aa5.91□□□□□ -1.46
USP40-205ENST00000430158 LCA10Q71F78 164 aa5.88□□□□□ -1.47
USP40-205ENST00000430158 S4R3F8 94 aa5.87□□□□□ -1.47
USP40-205ENST00000430158 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
USP40-205ENST00000430158 A8MUN3 132 aa5.83□□□□□ -1.48
USP40-205ENST00000430158 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
USP40-205ENST00000430158 SERP2Q8N6R1 65 aa5.82□□□□□ -1.48
USP40-205ENST00000430158 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
USP40-205ENST00000430158 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
USP40-205ENST00000430158 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
USP40-205ENST00000430158 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
USP40-205ENST00000430158 USH2AO75445 5202 aa5.77□□□□□ -1.49
USP40-205ENST00000430158 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
USP40-205ENST00000430158 C20orf197Q8N268 126 aa5.74□□□□□ -1.49
USP40-205ENST00000430158 COX7CP15954 63 aa5.72□□□□□ -1.49
USP40-205ENST00000430158 NDUFC1O43677 76 aa5.71□□□□□ -1.5
USP40-205ENST00000430158 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
USP40-205ENST00000430158 SPANXA2-OT1Q8N9U9 137 aa5.68□□□□□ -1.5
USP40-205ENST00000430158 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
USP40-205ENST00000430158 H0YAA0 97 aa5.66□□□□□ -1.5
USP40-205ENST00000430158 ACYP2P14621 99 aa5.65□□□□□ -1.5
USP40-205ENST00000430158 CYSTM1Q9H1C7 97 aa5.65□□□□□ -1.5
USP40-205ENST00000430158 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
USP40-205ENST00000430158 H7BZZ5 65 aa5.6□□□□□ -1.51
USP40-205ENST00000430158 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
USP40-205ENST00000430158 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.58□□□□□ -1.52
USP40-205ENST00000430158 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
USP40-205ENST00000430158 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
USP40-205ENST00000430158 CRIPTQ9P021 101 aa5.55□□□□□ -1.52
USP40-205ENST00000430158 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
USP40-205ENST00000430158 P0C880 135 aa5.53□□□□□ -1.52
USP40-205ENST00000430158 MT1BP07438 61 aa5.52□□□□□ -1.53
USP40-205ENST00000430158 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
USP40-205ENST00000430158 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
USP40-205ENST00000430158 CHKB-CPT1BH3BT56 60 aa5.49□□□□□ -1.53
USP40-205ENST00000430158 COA5Q86WW8 74 aa5.49□□□□□ -1.53
USP40-205ENST00000430158 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
USP40-205ENST00000430158 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
USP40-205ENST00000430158 Q5VV11 94 aa5.44□□□□□ -1.54
USP40-205ENST00000430158 KRTAP5-11Q6L8G4 156 aa5.42□□□□□ -1.54
USP40-205ENST00000430158 R4GN34 69 aa5.37□□□□□ -1.55
USP40-205ENST00000430158 M0QZ58 72 aa5.35□□□□□ -1.55
USP40-205ENST00000430158 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
USP40-205ENST00000430158 ATP5EP56381 51 aaPredicted RBP5.34□□□□□ -1.55
USP40-205ENST00000430158 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
USP40-205ENST00000430158 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
USP40-205ENST00000430158 TMEM258P61165 79 aa5.31□□□□□ -1.56
USP40-205ENST00000430158 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
USP40-205ENST00000430158 A6NN06 94 aa5.26□□□□□ -1.57
USP40-205ENST00000430158 MT1XP80297 61 aa5.24□□□□□ -1.57
USP40-205ENST00000430158 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
USP40-205ENST00000430158 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
USP40-205ENST00000430158 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
USP40-205ENST00000430158 SEC61GP60059 68 aa5.2□□□□□ -1.58
USP40-205ENST00000430158 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
USP40-205ENST00000430158 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
USP40-205ENST00000430158 A0A1B0GU33 70 aa5.17□□□□□ -1.58
USP40-205ENST00000430158 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
USP40-205ENST00000430158 A0A1B0GU69 56 aa5.15□□□□□ -1.59
USP40-205ENST00000430158 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
USP40-205ENST00000430158 PCP4P48539 62 aa5.13□□□□□ -1.59
USP40-205ENST00000430158 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
USP40-205ENST00000430158 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
USP40-205ENST00000430158 A0A0D9SG42 100 aa5.06□□□□□ -1.6
USP40-205ENST00000430158 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
USP40-205ENST00000430158 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
USP40-205ENST00000430158 KRTAP12-2P59991 146 aa5.04□□□□□ -1.6
USP40-205ENST00000430158 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
USP40-205ENST00000430158 A8MU10 97 aa5.01□□□□□ -1.61
USP40-205ENST00000430158 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
USP40-205ENST00000430158 Q1T7F1 81 aa4.99□□□□□ -1.61
USP40-205ENST00000430158 KMT2DO14686 5537 aa4.98□□□□□ -1.61
USP40-205ENST00000430158 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
USP40-205ENST00000430158 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
USP40-205ENST00000430158 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
USP40-205ENST00000430158 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
USP40-205ENST00000430158 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
USP40-205ENST00000430158 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
USP40-205ENST00000430158 V9GYY9 64 aa4.94□□□□□ -1.62
USP40-205ENST00000430158 UQCR11O14957 56 aa4.92□□□□□ -1.62
USP40-205ENST00000430158 PSPHP1O15172 72 aa4.9□□□□□ -1.63
USP40-205ENST00000430158 NEBP20929 6669 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms